RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 NISCHQ9Y2I1 1504 aa25.3■■□□□ 1.64
TRIM6-209ENST00000507320 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
TRIM6-209ENST00000507320 ABCC9O60706 1549 aa21.55■■□□□ 1.04
TRIM6-209ENST00000507320 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
TRIM6-209ENST00000507320 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
TRIM6-209ENST00000507320 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
TRIM6-209ENST00000507320 NACADO15069 1562 aa20.88■□□□□ 0.93
TRIM6-209ENST00000507320 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
TRIM6-209ENST00000507320 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
TRIM6-209ENST00000507320 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
TRIM6-209ENST00000507320 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
TRIM6-209ENST00000507320 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
TRIM6-209ENST00000507320 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
TRIM6-209ENST00000507320 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
TRIM6-209ENST00000507320 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
TRIM6-209ENST00000507320 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
TRIM6-209ENST00000507320 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
TRIM6-209ENST00000507320 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
TRIM6-209ENST00000507320 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
TRIM6-209ENST00000507320 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
TRIM6-209ENST00000507320 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
TRIM6-209ENST00000507320 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
TRIM6-209ENST00000507320 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
TRIM6-209ENST00000507320 WIZO95785 1651 aa19.36■□□□□ 0.69
TRIM6-209ENST00000507320 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
TRIM6-209ENST00000507320 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
TRIM6-209ENST00000507320 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
TRIM6-209ENST00000507320 SUPT5HO00267 1087 aaKnown RBP19.24■□□□□ 0.67
TRIM6-209ENST00000507320 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
TRIM6-209ENST00000507320 HMGXB3Q12766 1538 aa19.21■□□□□ 0.67
TRIM6-209ENST00000507320 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
TRIM6-209ENST00000507320 CCDC88BA6NC98 1476 aa18.92■□□□□ 0.62
TRIM6-209ENST00000507320 NESP48681 1621 aa18.77■□□□□ 0.6
TRIM6-209ENST00000507320 CADPSQ9ULU8 1353 aa18.74■□□□□ 0.59
TRIM6-209ENST00000507320 CFTRP13569 1480 aa18.71■□□□□ 0.59
TRIM6-209ENST00000507320 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
TRIM6-209ENST00000507320 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
TRIM6-209ENST00000507320 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
TRIM6-209ENST00000507320 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
TRIM6-209ENST00000507320 FANCD2Q9BXW9 1451 aa18.53■□□□□ 0.56
TRIM6-209ENST00000507320 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
TRIM6-209ENST00000507320 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
TRIM6-209ENST00000507320 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
TRIM6-209ENST00000507320 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
TRIM6-209ENST00000507320 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
TRIM6-209ENST00000507320 MRC2Q9UBG0 1479 aa18.36■□□□□ 0.53
TRIM6-209ENST00000507320 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
TRIM6-209ENST00000507320 WDR62O43379 1518 aa18.3■□□□□ 0.52
TRIM6-209ENST00000507320 CUX1P39880 1505 aa18.3■□□□□ 0.52
TRIM6-209ENST00000507320 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
TRIM6-209ENST00000507320 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
TRIM6-209ENST00000507320 DNMBPQ6XZF7 1577 aa18.28■□□□□ 0.52
TRIM6-209ENST00000507320 SYNJ1O43426 1573 aa18.26■□□□□ 0.51
TRIM6-209ENST00000507320 TOP2BQ02880 1626 aa18.22■□□□□ 0.51
TRIM6-209ENST00000507320 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
TRIM6-209ENST00000507320 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
TRIM6-209ENST00000507320 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
TRIM6-209ENST00000507320 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
TRIM6-209ENST00000507320 CUX2O14529 1486 aa18.14■□□□□ 0.49
TRIM6-209ENST00000507320 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
TRIM6-209ENST00000507320 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
TRIM6-209ENST00000507320 SOGA1O94964 1423 aa18.08■□□□□ 0.48
TRIM6-209ENST00000507320 TARBP1Q13395 1621 aaKnown RBP18.07■□□□□ 0.48
TRIM6-209ENST00000507320 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
TRIM6-209ENST00000507320 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
TRIM6-209ENST00000507320 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
TRIM6-209ENST00000507320 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
TRIM6-209ENST00000507320 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
TRIM6-209ENST00000507320 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.469e-8■■□□□ 11.9
TRIM6-209ENST00000507320 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
TRIM6-209ENST00000507320 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
TRIM6-209ENST00000507320 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
TRIM6-209ENST00000507320 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
TRIM6-209ENST00000507320 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
TRIM6-209ENST00000507320 PBRM1Q86U86 1689 aa17.83■□□□□ 0.44
TRIM6-209ENST00000507320 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
TRIM6-209ENST00000507320 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
TRIM6-209ENST00000507320 IGF1RP08069 1367 aa17.78■□□□□ 0.44
TRIM6-209ENST00000507320 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
TRIM6-209ENST00000507320 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
TRIM6-209ENST00000507320 EEA1Q15075 1411 aa17.73■□□□□ 0.43
TRIM6-209ENST00000507320 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.43
TRIM6-209ENST00000507320 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
TRIM6-209ENST00000507320 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
TRIM6-209ENST00000507320 CUL7Q14999 1698 aa17.68■□□□□ 0.42
TRIM6-209ENST00000507320 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
TRIM6-209ENST00000507320 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
TRIM6-209ENST00000507320 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
TRIM6-209ENST00000507320 CHD1O14646 1710 aa17.64■□□□□ 0.41
TRIM6-209ENST00000507320 FBLN2P98095 1184 aa17.64■□□□□ 0.41
TRIM6-209ENST00000507320 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
TRIM6-209ENST00000507320 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
TRIM6-209ENST00000507320 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
TRIM6-209ENST00000507320 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
TRIM6-209ENST00000507320 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
TRIM6-209ENST00000507320 KIF21BO75037 1637 aa17.56■□□□□ 0.4
TRIM6-209ENST00000507320 CEP170Q5SW79 1584 aa17.52■□□□□ 0.4
TRIM6-209ENST00000507320 NUP160Q12769 1436 aa17.5■□□□□ 0.39
TRIM6-209ENST00000507320 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
TRIM6-209ENST00000507320 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms