RNA–Protein interactions for RNA: ENST00000507155.1

USP17L16P-201, Transcript of ubiquitin specific peptidase 17-like family member 16, pseudogene, humanhuman

BASIC

Gene USP17L16P, Length 1,593 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L16P-201ENST00000507155 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.47
USP17L16P-201ENST00000507155 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
USP17L16P-201ENST00000507155 ABCC9O60706 1549 aa20.76■□□□□ 0.91
USP17L16P-201ENST00000507155 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
USP17L16P-201ENST00000507155 NACADO15069 1562 aa20.21■□□□□ 0.83
USP17L16P-201ENST00000507155 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
USP17L16P-201ENST00000507155 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
USP17L16P-201ENST00000507155 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
USP17L16P-201ENST00000507155 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
USP17L16P-201ENST00000507155 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
USP17L16P-201ENST00000507155 BICRAQ9NZM4 1560 aa19.52■□□□□ 0.71
USP17L16P-201ENST00000507155 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
USP17L16P-201ENST00000507155 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
USP17L16P-201ENST00000507155 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
USP17L16P-201ENST00000507155 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
USP17L16P-201ENST00000507155 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
USP17L16P-201ENST00000507155 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
USP17L16P-201ENST00000507155 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
USP17L16P-201ENST00000507155 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
USP17L16P-201ENST00000507155 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
USP17L16P-201ENST00000507155 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
USP17L16P-201ENST00000507155 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.58
USP17L16P-201ENST00000507155 SMARCA2P51531 1590 aa18.64■□□□□ 0.57
USP17L16P-201ENST00000507155 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
USP17L16P-201ENST00000507155 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
USP17L16P-201ENST00000507155 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
USP17L16P-201ENST00000507155 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.54
USP17L16P-201ENST00000507155 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
USP17L16P-201ENST00000507155 WIZO95785 1651 aa18.37■□□□□ 0.53
USP17L16P-201ENST00000507155 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
USP17L16P-201ENST00000507155 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
USP17L16P-201ENST00000507155 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
USP17L16P-201ENST00000507155 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
USP17L16P-201ENST00000507155 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
USP17L16P-201ENST00000507155 NESP48681 1621 aa18■□□□□ 0.47
USP17L16P-201ENST00000507155 CFTRP13569 1480 aa18■□□□□ 0.47
USP17L16P-201ENST00000507155 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
USP17L16P-201ENST00000507155 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
USP17L16P-201ENST00000507155 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
USP17L16P-201ENST00000507155 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
USP17L16P-201ENST00000507155 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.45
USP17L16P-201ENST00000507155 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
USP17L16P-201ENST00000507155 CUX2O14529 1486 aa17.8■□□□□ 0.44
USP17L16P-201ENST00000507155 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
USP17L16P-201ENST00000507155 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
USP17L16P-201ENST00000507155 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
USP17L16P-201ENST00000507155 WDR62O43379 1518 aa17.72■□□□□ 0.43
USP17L16P-201ENST00000507155 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
USP17L16P-201ENST00000507155 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
USP17L16P-201ENST00000507155 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
USP17L16P-201ENST00000507155 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
USP17L16P-201ENST00000507155 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
USP17L16P-201ENST00000507155 CUX1P39880 1505 aa17.44■□□□□ 0.38
USP17L16P-201ENST00000507155 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
USP17L16P-201ENST00000507155 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
USP17L16P-201ENST00000507155 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
USP17L16P-201ENST00000507155 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
USP17L16P-201ENST00000507155 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
USP17L16P-201ENST00000507155 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
USP17L16P-201ENST00000507155 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
USP17L16P-201ENST00000507155 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
USP17L16P-201ENST00000507155 SOGA1O94964 1423 aa17.34■□□□□ 0.37
USP17L16P-201ENST00000507155 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
USP17L16P-201ENST00000507155 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.36
USP17L16P-201ENST00000507155 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
USP17L16P-201ENST00000507155 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
USP17L16P-201ENST00000507155 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
USP17L16P-201ENST00000507155 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP17L16P-201ENST00000507155 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
USP17L16P-201ENST00000507155 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
USP17L16P-201ENST00000507155 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
USP17L16P-201ENST00000507155 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
USP17L16P-201ENST00000507155 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
USP17L16P-201ENST00000507155 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
USP17L16P-201ENST00000507155 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
USP17L16P-201ENST00000507155 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
USP17L16P-201ENST00000507155 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
USP17L16P-201ENST00000507155 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
USP17L16P-201ENST00000507155 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
USP17L16P-201ENST00000507155 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
USP17L16P-201ENST00000507155 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
USP17L16P-201ENST00000507155 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
USP17L16P-201ENST00000507155 CHD1O14646 1710 aa16.98■□□□□ 0.31
USP17L16P-201ENST00000507155 ADAMTS12P58397 1594 aa16.97■□□□□ 0.31
USP17L16P-201ENST00000507155 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
USP17L16P-201ENST00000507155 IGF1RP08069 1367 aa16.95■□□□□ 0.3
USP17L16P-201ENST00000507155 CUL7Q14999 1698 aa16.93■□□□□ 0.3
USP17L16P-201ENST00000507155 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
USP17L16P-201ENST00000507155 FBLN2P98095 1184 aa16.89■□□□□ 0.29
USP17L16P-201ENST00000507155 NUP160Q12769 1436 aa16.88■□□□□ 0.29
USP17L16P-201ENST00000507155 EEA1Q15075 1411 aa16.87■□□□□ 0.29
USP17L16P-201ENST00000507155 CLASP1Q7Z460 1538 aa16.87■□□□□ 0.29
USP17L16P-201ENST00000507155 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
USP17L16P-201ENST00000507155 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
USP17L16P-201ENST00000507155 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
USP17L16P-201ENST00000507155 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.28
USP17L16P-201ENST00000507155 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
USP17L16P-201ENST00000507155 KIAA0586Q9BVV6 1533 aa16.74■□□□□ 0.27
USP17L16P-201ENST00000507155 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
USP17L16P-201ENST00000507155 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms