RNA–Protein interactions for RNA: ENST00000507107.1

GNPDA1-208, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

TSL 2

Gene GNPDA1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-208ENST00000507107 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
GNPDA1-208ENST00000507107 ABCC9O60706 1549 aa20.53■□□□□ 0.88
GNPDA1-208ENST00000507107 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
GNPDA1-208ENST00000507107 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
GNPDA1-208ENST00000507107 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
GNPDA1-208ENST00000507107 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
GNPDA1-208ENST00000507107 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
GNPDA1-208ENST00000507107 NACADO15069 1562 aa18.7■□□□□ 0.58
GNPDA1-208ENST00000507107 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
GNPDA1-208ENST00000507107 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
GNPDA1-208ENST00000507107 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
GNPDA1-208ENST00000507107 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
GNPDA1-208ENST00000507107 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
GNPDA1-208ENST00000507107 SHROOM4Q9ULL8 1493 aa18.21■□□□□ 0.51
GNPDA1-208ENST00000507107 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
GNPDA1-208ENST00000507107 CUX2O14529 1486 aa18.11■□□□□ 0.49
GNPDA1-208ENST00000507107 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
GNPDA1-208ENST00000507107 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
GNPDA1-208ENST00000507107 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
GNPDA1-208ENST00000507107 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
GNPDA1-208ENST00000507107 DCAF1Q9Y4B6 1507 aa17.48■□□□□ 0.39
GNPDA1-208ENST00000507107 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
GNPDA1-208ENST00000507107 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
GNPDA1-208ENST00000507107 NESP48681 1621 aa17.32■□□□□ 0.36
GNPDA1-208ENST00000507107 THOC2Q8NI27 1593 aaKnown RBP17.31■□□□□ 0.36
GNPDA1-208ENST00000507107 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
GNPDA1-208ENST00000507107 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
GNPDA1-208ENST00000507107 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
GNPDA1-208ENST00000507107 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
GNPDA1-208ENST00000507107 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
GNPDA1-208ENST00000507107 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
GNPDA1-208ENST00000507107 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
GNPDA1-208ENST00000507107 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
GNPDA1-208ENST00000507107 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
GNPDA1-208ENST00000507107 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
GNPDA1-208ENST00000507107 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
GNPDA1-208ENST00000507107 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
GNPDA1-208ENST00000507107 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
GNPDA1-208ENST00000507107 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
GNPDA1-208ENST00000507107 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
GNPDA1-208ENST00000507107 WDR62O43379 1518 aa16.87■□□□□ 0.29
GNPDA1-208ENST00000507107 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
GNPDA1-208ENST00000507107 ARHGEF11O15085 1522 aa16.83■□□□□ 0.28
GNPDA1-208ENST00000507107 SMARCA4P51532 1647 aa16.79■□□□□ 0.28
GNPDA1-208ENST00000507107 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
GNPDA1-208ENST00000507107 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
GNPDA1-208ENST00000507107 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
GNPDA1-208ENST00000507107 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
GNPDA1-208ENST00000507107 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
GNPDA1-208ENST00000507107 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
GNPDA1-208ENST00000507107 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
GNPDA1-208ENST00000507107 RSF1Q96T23 1441 aaPredicted RBP16.43■□□□□ 0.22
GNPDA1-208ENST00000507107 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
GNPDA1-208ENST00000507107 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
GNPDA1-208ENST00000507107 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
GNPDA1-208ENST00000507107 FBLN2P98095 1184 aa16.36■□□□□ 0.21
GNPDA1-208ENST00000507107 CHD1O14646 1710 aa16.31■□□□□ 0.2
GNPDA1-208ENST00000507107 CFTRP13569 1480 aa16.3■□□□□ 0.2
GNPDA1-208ENST00000507107 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
GNPDA1-208ENST00000507107 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
GNPDA1-208ENST00000507107 WIZO95785 1651 aa16.11■□□□□ 0.17
GNPDA1-208ENST00000507107 TOPBP1Q92547 1522 aa16.1■□□□□ 0.17
GNPDA1-208ENST00000507107 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
GNPDA1-208ENST00000507107 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
GNPDA1-208ENST00000507107 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
GNPDA1-208ENST00000507107 SYNJ1O43426 1573 aa16.06■□□□□ 0.16
GNPDA1-208ENST00000507107 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
GNPDA1-208ENST00000507107 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
GNPDA1-208ENST00000507107 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
GNPDA1-208ENST00000507107 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
GNPDA1-208ENST00000507107 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
GNPDA1-208ENST00000507107 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
GNPDA1-208ENST00000507107 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
GNPDA1-208ENST00000507107 TDRD9Q8NDG6 1382 aaKnown RBP15.92■□□□□ 0.14
GNPDA1-208ENST00000507107 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
GNPDA1-208ENST00000507107 KIF13AQ9H1H9 1805 aa15.89■□□□□ 0.13
GNPDA1-208ENST00000507107 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
GNPDA1-208ENST00000507107 POLA1P09884 1462 aaPredicted RBP15.87■□□□□ 0.13
GNPDA1-208ENST00000507107 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
GNPDA1-208ENST00000507107 FAM69CQ0P6D2 419 aa15.85■□□□□ 0.13
GNPDA1-208ENST00000507107 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
GNPDA1-208ENST00000507107 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
GNPDA1-208ENST00000507107 SOGA1O94964 1423 aa15.83■□□□□ 0.12
GNPDA1-208ENST00000507107 LMTK3Q96Q04 1460 aa15.82■□□□□ 0.12
GNPDA1-208ENST00000507107 HECW2Q9P2P5 1572 aa15.82■□□□□ 0.12
GNPDA1-208ENST00000507107 KDM6BO15054 1643 aa15.81■□□□□ 0.12
GNPDA1-208ENST00000507107 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
GNPDA1-208ENST00000507107 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
GNPDA1-208ENST00000507107 ABCC10Q5T3U5 1492 aa15.75■□□□□ 0.11
GNPDA1-208ENST00000507107 ADGRL1O94910 1474 aa15.73■□□□□ 0.11
GNPDA1-208ENST00000507107 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
GNPDA1-208ENST00000507107 SOCS7O14512 581 aa15.71■□□□□ 0.11
GNPDA1-208ENST00000507107 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.1
GNPDA1-208ENST00000507107 CEP170Q5SW79 1584 aa15.67■□□□□ 0.1
GNPDA1-208ENST00000507107 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
GNPDA1-208ENST00000507107 DIP2BQ9P265 1576 aa15.63■□□□□ 0.09
GNPDA1-208ENST00000507107 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
GNPDA1-208ENST00000507107 TSPOAP1O95153 1857 aa15.6■□□□□ 0.09
GNPDA1-208ENST00000507107 PBRM1Q86U86 1689 aa15.6■□□□□ 0.09
GNPDA1-208ENST00000507107 ILDR2Q71H61 639 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms