RNA–Protein interactions for RNA: ENST00000506873.5

KLHL3-208, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,883 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-208ENST00000506873 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
KLHL3-208ENST00000506873 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
KLHL3-208ENST00000506873 ABCC9O60706 1549 aa28.64■■■□□ 2.17
KLHL3-208ENST00000506873 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
KLHL3-208ENST00000506873 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
KLHL3-208ENST00000506873 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
KLHL3-208ENST00000506873 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
KLHL3-208ENST00000506873 NACADO15069 1562 aa27.86■■■□□ 2.05
KLHL3-208ENST00000506873 RB1CC1Q8TDY2 1594 aa27.71■■■□□ 2.03
KLHL3-208ENST00000506873 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
KLHL3-208ENST00000506873 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
KLHL3-208ENST00000506873 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
KLHL3-208ENST00000506873 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
KLHL3-208ENST00000506873 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
KLHL3-208ENST00000506873 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
KLHL3-208ENST00000506873 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
KLHL3-208ENST00000506873 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
KLHL3-208ENST00000506873 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
KLHL3-208ENST00000506873 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
KLHL3-208ENST00000506873 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
KLHL3-208ENST00000506873 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
KLHL3-208ENST00000506873 WIZO95785 1651 aa26.02■■□□□ 1.76
KLHL3-208ENST00000506873 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
KLHL3-208ENST00000506873 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
KLHL3-208ENST00000506873 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
KLHL3-208ENST00000506873 CC2D2AQ9P2K1 1620 aa25.83■■□□□ 1.73
KLHL3-208ENST00000506873 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
KLHL3-208ENST00000506873 DNAJC5BQ9UF47 199 aa25.75■■□□□ 1.71
KLHL3-208ENST00000506873 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
KLHL3-208ENST00000506873 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
KLHL3-208ENST00000506873 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
KLHL3-208ENST00000506873 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
KLHL3-208ENST00000506873 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
KLHL3-208ENST00000506873 CFTRP13569 1480 aa25.1■■□□□ 1.61
KLHL3-208ENST00000506873 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
KLHL3-208ENST00000506873 NESP48681 1621 aa25.02■■□□□ 1.6
KLHL3-208ENST00000506873 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
KLHL3-208ENST00000506873 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
KLHL3-208ENST00000506873 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
KLHL3-208ENST00000506873 FANCD2Q9BXW9 1451 aa24.81■■□□□ 1.56
KLHL3-208ENST00000506873 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
KLHL3-208ENST00000506873 WRNQ14191 1432 aaPredicted RBP eCLIP24.76■■□□□ 1.55
KLHL3-208ENST00000506873 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
KLHL3-208ENST00000506873 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
KLHL3-208ENST00000506873 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
KLHL3-208ENST00000506873 CUX1P39880 1505 aa24.6■■□□□ 1.53
KLHL3-208ENST00000506873 KIF21AQ7Z4S6 1674 aa24.58■■□□□ 1.53
KLHL3-208ENST00000506873 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
KLHL3-208ENST00000506873 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
KLHL3-208ENST00000506873 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
KLHL3-208ENST00000506873 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
KLHL3-208ENST00000506873 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
KLHL3-208ENST00000506873 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
KLHL3-208ENST00000506873 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
KLHL3-208ENST00000506873 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
KLHL3-208ENST00000506873 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
KLHL3-208ENST00000506873 SOGA1O94964 1423 aa24.37■■□□□ 1.49
KLHL3-208ENST00000506873 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
KLHL3-208ENST00000506873 WDR62O43379 1518 aa24.31■■□□□ 1.48
KLHL3-208ENST00000506873 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
KLHL3-208ENST00000506873 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
KLHL3-208ENST00000506873 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
KLHL3-208ENST00000506873 CUX2O14529 1486 aa24.22■■□□□ 1.47
KLHL3-208ENST00000506873 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
KLHL3-208ENST00000506873 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
KLHL3-208ENST00000506873 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
KLHL3-208ENST00000506873 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
KLHL3-208ENST00000506873 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
KLHL3-208ENST00000506873 EEA1Q15075 1411 aa24.15■■□□□ 1.46
KLHL3-208ENST00000506873 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
KLHL3-208ENST00000506873 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
KLHL3-208ENST00000506873 IFT140Q96RY7 1462 aa24.11■■□□□ 1.45
KLHL3-208ENST00000506873 IGF1RP08069 1367 aa24.06■■□□□ 1.44
KLHL3-208ENST00000506873 AQRO60306 1485 aaKnown RBP eCLIP24.05■■□□□ 1.44
KLHL3-208ENST00000506873 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
KLHL3-208ENST00000506873 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
KLHL3-208ENST00000506873 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
KLHL3-208ENST00000506873 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
KLHL3-208ENST00000506873 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
KLHL3-208ENST00000506873 PRXQ9BXM0 1461 aa23.9■■□□□ 1.42
KLHL3-208ENST00000506873 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
KLHL3-208ENST00000506873 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
KLHL3-208ENST00000506873 RAPGEF2Q9Y4G8 1499 aa23.86■■□□□ 1.41
KLHL3-208ENST00000506873 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
KLHL3-208ENST00000506873 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
KLHL3-208ENST00000506873 GOLGA3Q08378 1498 aa23.8■■□□□ 1.4
KLHL3-208ENST00000506873 KIF21BO75037 1637 aa23.8■■□□□ 1.4
KLHL3-208ENST00000506873 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
KLHL3-208ENST00000506873 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
KLHL3-208ENST00000506873 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
KLHL3-208ENST00000506873 CUL7Q14999 1698 aa23.71■■□□□ 1.39
KLHL3-208ENST00000506873 TNIKQ9UKE5 1360 aa23.71■■□□□ 1.39
KLHL3-208ENST00000506873 FBLN2P98095 1184 aa23.7■■□□□ 1.38
KLHL3-208ENST00000506873 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
KLHL3-208ENST00000506873 MAGI1Q96QZ7 1491 aaPredicted RBP23.67■■□□□ 1.38
KLHL3-208ENST00000506873 ADAMTS12P58397 1594 aa23.64■■□□□ 1.38
KLHL3-208ENST00000506873 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
KLHL3-208ENST00000506873 SYNJ2O15056 1496 aa23.61■■□□□ 1.37
KLHL3-208ENST00000506873 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
KLHL3-208ENST00000506873 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms