RNA–Protein interactions for RNA: ENST00000506732.1

LDB2-208, Transcript of LIM domain binding 2, humanhuman

TSL 4

Gene LDB2, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-208ENST00000506732 NISCHQ9Y2I1 1504 aa19.9■□□□□ 0.78
LDB2-208ENST00000506732 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
LDB2-208ENST00000506732 ABCC9O60706 1549 aa17.06■□□□□ 0.32
LDB2-208ENST00000506732 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
LDB2-208ENST00000506732 DCAF8L2P0C7V8 631 aa16.6■□□□□ 0.25
LDB2-208ENST00000506732 NACADO15069 1562 aa16.54■□□□□ 0.24
LDB2-208ENST00000506732 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
LDB2-208ENST00000506732 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
LDB2-208ENST00000506732 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
LDB2-208ENST00000506732 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
LDB2-208ENST00000506732 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
LDB2-208ENST00000506732 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
LDB2-208ENST00000506732 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
LDB2-208ENST00000506732 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
LDB2-208ENST00000506732 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
LDB2-208ENST00000506732 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
LDB2-208ENST00000506732 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
LDB2-208ENST00000506732 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
LDB2-208ENST00000506732 SMARCA4P51532 1647 aa15.43■□□□□ 0.06
LDB2-208ENST00000506732 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
LDB2-208ENST00000506732 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.05
LDB2-208ENST00000506732 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
LDB2-208ENST00000506732 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
LDB2-208ENST00000506732 PEG3Q9GZU2 1588 aa15.25■□□□□ 0.03
LDB2-208ENST00000506732 WIZO95785 1651 aa15.22■□□□□ 0.03
LDB2-208ENST00000506732 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
LDB2-208ENST00000506732 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
LDB2-208ENST00000506732 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
LDB2-208ENST00000506732 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
LDB2-208ENST00000506732 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
LDB2-208ENST00000506732 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
LDB2-208ENST00000506732 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
LDB2-208ENST00000506732 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
LDB2-208ENST00000506732 NESP48681 1621 aa14.81□□□□□ -0.04
LDB2-208ENST00000506732 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
LDB2-208ENST00000506732 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
LDB2-208ENST00000506732 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
LDB2-208ENST00000506732 CFTRP13569 1480 aa14.74□□□□□ -0.05
LDB2-208ENST00000506732 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
LDB2-208ENST00000506732 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.05
LDB2-208ENST00000506732 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
LDB2-208ENST00000506732 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
LDB2-208ENST00000506732 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
LDB2-208ENST00000506732 MRC2Q9UBG0 1479 aa14.56□□□□□ -0.08
LDB2-208ENST00000506732 WDR62O43379 1518 aa14.5□□□□□ -0.09
LDB2-208ENST00000506732 CUX2O14529 1486 aa14.48□□□□□ -0.09
LDB2-208ENST00000506732 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
LDB2-208ENST00000506732 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
LDB2-208ENST00000506732 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
LDB2-208ENST00000506732 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
LDB2-208ENST00000506732 CUX1P39880 1505 aa14.38□□□□□ -0.11
LDB2-208ENST00000506732 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
LDB2-208ENST00000506732 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
LDB2-208ENST00000506732 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
LDB2-208ENST00000506732 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
LDB2-208ENST00000506732 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
LDB2-208ENST00000506732 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
LDB2-208ENST00000506732 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
LDB2-208ENST00000506732 SOGA1O94964 1423 aa14.26□□□□□ -0.13
LDB2-208ENST00000506732 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
LDB2-208ENST00000506732 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
LDB2-208ENST00000506732 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
LDB2-208ENST00000506732 EIF4G3O43432 1585 aaKnown RBP14.21□□□□□ -0.14
LDB2-208ENST00000506732 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
LDB2-208ENST00000506732 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
LDB2-208ENST00000506732 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
LDB2-208ENST00000506732 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
LDB2-208ENST00000506732 AQRO60306 1485 aaKnown RBP eCLIP14.14□□□□□ -0.15
LDB2-208ENST00000506732 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
LDB2-208ENST00000506732 ABCA5Q8WWZ7 1642 aa14.13□□□□□ -0.15
LDB2-208ENST00000506732 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
LDB2-208ENST00000506732 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
LDB2-208ENST00000506732 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
LDB2-208ENST00000506732 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
LDB2-208ENST00000506732 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
LDB2-208ENST00000506732 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
LDB2-208ENST00000506732 ERICH3Q5RHP9 1530 aa14.04□□□□□ -0.16
LDB2-208ENST00000506732 CHD1O14646 1710 aa14.01□□□□□ -0.17
LDB2-208ENST00000506732 CUL7Q14999 1698 aa13.99□□□□□ -0.17
LDB2-208ENST00000506732 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
LDB2-208ENST00000506732 FBLN2P98095 1184 aa13.98□□□□□ -0.17
LDB2-208ENST00000506732 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
LDB2-208ENST00000506732 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.17
LDB2-208ENST00000506732 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
LDB2-208ENST00000506732 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
LDB2-208ENST00000506732 EEA1Q15075 1411 aa13.94□□□□□ -0.18
LDB2-208ENST00000506732 IGF1RP08069 1367 aa13.93□□□□□ -0.18
LDB2-208ENST00000506732 GRIN2AQ12879 1464 aa13.91□□□□□ -0.18
LDB2-208ENST00000506732 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
LDB2-208ENST00000506732 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
LDB2-208ENST00000506732 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
LDB2-208ENST00000506732 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
LDB2-208ENST00000506732 RAPGEF2Q9Y4G8 1499 aa13.85□□□□□ -0.19
LDB2-208ENST00000506732 CEP170Q5SW79 1584 aa13.83□□□□□ -0.2
LDB2-208ENST00000506732 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
LDB2-208ENST00000506732 NUP160Q12769 1436 aa13.8□□□□□ -0.2
LDB2-208ENST00000506732 CLASP1Q7Z460 1538 aa13.8□□□□□ -0.2
LDB2-208ENST00000506732 KIF21BO75037 1637 aa13.79□□□□□ -0.2
LDB2-208ENST00000506732 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
LDB2-208ENST00000506732 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms