RNA–Protein interactions for RNA: ENST00000506415.1

FRMD1-207, Transcript of FERM domain containing 1, humanhuman

TSL 4

Gene FRMD1, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-207ENST00000506415 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
FRMD1-207ENST00000506415 ABCC9O60706 1549 aa31.07■■■□□ 2.56
FRMD1-207ENST00000506415 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
FRMD1-207ENST00000506415 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
FRMD1-207ENST00000506415 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.28
FRMD1-207ENST00000506415 NACADO15069 1562 aa28.9■■■□□ 2.22
FRMD1-207ENST00000506415 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
FRMD1-207ENST00000506415 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
FRMD1-207ENST00000506415 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
FRMD1-207ENST00000506415 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
FRMD1-207ENST00000506415 MYO15BQ96JP2 1530 aa28.29■■■□□ 2.12
FRMD1-207ENST00000506415 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
FRMD1-207ENST00000506415 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
FRMD1-207ENST00000506415 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
FRMD1-207ENST00000506415 DNAJC5Q9H3Z4 198 aa27.91■■■□□ 2.06
FRMD1-207ENST00000506415 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
FRMD1-207ENST00000506415 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
FRMD1-207ENST00000506415 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
FRMD1-207ENST00000506415 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
FRMD1-207ENST00000506415 CUX2O14529 1486 aa27.1■■□□□ 1.93
FRMD1-207ENST00000506415 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
FRMD1-207ENST00000506415 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
FRMD1-207ENST00000506415 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
FRMD1-207ENST00000506415 NESP48681 1621 aa26.5■■□□□ 1.83
FRMD1-207ENST00000506415 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
FRMD1-207ENST00000506415 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
FRMD1-207ENST00000506415 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
FRMD1-207ENST00000506415 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
FRMD1-207ENST00000506415 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
FRMD1-207ENST00000506415 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.79
FRMD1-207ENST00000506415 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
FRMD1-207ENST00000506415 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
FRMD1-207ENST00000506415 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
FRMD1-207ENST00000506415 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
FRMD1-207ENST00000506415 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
FRMD1-207ENST00000506415 MRC2Q9UBG0 1479 aa25.88■■□□□ 1.73
FRMD1-207ENST00000506415 WDR62O43379 1518 aa25.87■■□□□ 1.73
FRMD1-207ENST00000506415 CADPSQ9ULU8 1353 aa25.84■■□□□ 1.73
FRMD1-207ENST00000506415 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
FRMD1-207ENST00000506415 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
FRMD1-207ENST00000506415 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
FRMD1-207ENST00000506415 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
FRMD1-207ENST00000506415 RIMBP3CA6NJZ7 1639 aa25.49■■□□□ 1.67
FRMD1-207ENST00000506415 RIMBP3BA6NNM3 1639 aa25.49■■□□□ 1.67
FRMD1-207ENST00000506415 RIMBP3Q9UFD9 1639 aa25.49■■□□□ 1.67
FRMD1-207ENST00000506415 WIZO95785 1651 aa25.46■■□□□ 1.67
FRMD1-207ENST00000506415 CFTRP13569 1480 aa25.4■■□□□ 1.66
FRMD1-207ENST00000506415 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
FRMD1-207ENST00000506415 ARHGEF11O15085 1522 aa25.33■■□□□ 1.65
FRMD1-207ENST00000506415 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
FRMD1-207ENST00000506415 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
FRMD1-207ENST00000506415 CYB5RLQ6IPT4 315 aa25.14■■□□□ 1.62
FRMD1-207ENST00000506415 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
FRMD1-207ENST00000506415 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
FRMD1-207ENST00000506415 TRHP20396 242 aaPredicted RBP25.06■■□□□ 1.6
FRMD1-207ENST00000506415 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
FRMD1-207ENST00000506415 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
FRMD1-207ENST00000506415 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
FRMD1-207ENST00000506415 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
FRMD1-207ENST00000506415 CHD1O14646 1710 aa24.96■■□□□ 1.59
FRMD1-207ENST00000506415 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.57
FRMD1-207ENST00000506415 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
FRMD1-207ENST00000506415 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
FRMD1-207ENST00000506415 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
FRMD1-207ENST00000506415 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
FRMD1-207ENST00000506415 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
FRMD1-207ENST00000506415 FBLN2P98095 1184 aa24.78■■□□□ 1.56
FRMD1-207ENST00000506415 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
FRMD1-207ENST00000506415 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
FRMD1-207ENST00000506415 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
FRMD1-207ENST00000506415 SNAPC4Q5SXM2 1469 aa24.59■■□□□ 1.53
FRMD1-207ENST00000506415 TDRD9Q8NDG6 1382 aaKnown RBP24.58■■□□□ 1.53
FRMD1-207ENST00000506415 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
FRMD1-207ENST00000506415 SOGA1O94964 1423 aa24.53■■□□□ 1.52
FRMD1-207ENST00000506415 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
FRMD1-207ENST00000506415 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
FRMD1-207ENST00000506415 MAGI1Q96QZ7 1491 aaPredicted RBP24.5■■□□□ 1.51
FRMD1-207ENST00000506415 GAPVD1Q14C86 1478 aa24.45■■□□□ 1.5
FRMD1-207ENST00000506415 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
FRMD1-207ENST00000506415 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
FRMD1-207ENST00000506415 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
FRMD1-207ENST00000506415 CUX1P39880 1505 aa24.3■■□□□ 1.48
FRMD1-207ENST00000506415 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
FRMD1-207ENST00000506415 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
FRMD1-207ENST00000506415 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
FRMD1-207ENST00000506415 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.46
FRMD1-207ENST00000506415 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
FRMD1-207ENST00000506415 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
FRMD1-207ENST00000506415 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
FRMD1-207ENST00000506415 NUP160Q12769 1436 aa24.08■■□□□ 1.44
FRMD1-207ENST00000506415 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
FRMD1-207ENST00000506415 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
FRMD1-207ENST00000506415 KDM4FA0A1W2PPD8 638 aa23.91■■□□□ 1.42
FRMD1-207ENST00000506415 ILDR1Q86SU0 546 aaPredicted RBP23.91■■□□□ 1.42
FRMD1-207ENST00000506415 ABCC10Q5T3U5 1492 aa23.91■■□□□ 1.42
FRMD1-207ENST00000506415 FHAD1B1AJZ9 1412 aa23.9■■□□□ 1.42
FRMD1-207ENST00000506415 FAM69CQ0P6D2 419 aa23.88■■□□□ 1.41
FRMD1-207ENST00000506415 PRG4Q92954 1404 aaPredicted RBP23.86■■□□□ 1.41
FRMD1-207ENST00000506415 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
FRMD1-207ENST00000506415 MAPKBP1O60336 1514 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms