RNA–Protein interactions for RNA: ENST00000506292.2

LINC00504-202, long intergenic non-protein coding RNA 504, humanhuman

TSL 2

Gene LINC00504, Length 462 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-202ENST00000506292 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
LINC00504-202ENST00000506292 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
LINC00504-202ENST00000506292 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
LINC00504-202ENST00000506292 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
LINC00504-202ENST00000506292 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
LINC00504-202ENST00000506292 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
LINC00504-202ENST00000506292 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
LINC00504-202ENST00000506292 ABCC9O60706 1549 aa18.16■□□□□ 0.5
LINC00504-202ENST00000506292 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
LINC00504-202ENST00000506292 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
LINC00504-202ENST00000506292 NACADO15069 1562 aa17.91■□□□□ 0.46
LINC00504-202ENST00000506292 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
LINC00504-202ENST00000506292 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
LINC00504-202ENST00000506292 FOXD1Q16676 465 aa17.67■□□□□ 0.42
LINC00504-202ENST00000506292 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
LINC00504-202ENST00000506292 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
LINC00504-202ENST00000506292 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
LINC00504-202ENST00000506292 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
LINC00504-202ENST00000506292 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00504-202ENST00000506292 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
LINC00504-202ENST00000506292 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
LINC00504-202ENST00000506292 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
LINC00504-202ENST00000506292 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.3
LINC00504-202ENST00000506292 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
LINC00504-202ENST00000506292 SUPT5HO00267 1087 aaKnown RBP16.86■□□□□ 0.29
LINC00504-202ENST00000506292 WIZO95785 1651 aa16.79■□□□□ 0.28
LINC00504-202ENST00000506292 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
LINC00504-202ENST00000506292 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
LINC00504-202ENST00000506292 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
LINC00504-202ENST00000506292 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
LINC00504-202ENST00000506292 MSH5O43196 834 aa16.62■□□□□ 0.25
LINC00504-202ENST00000506292 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
LINC00504-202ENST00000506292 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.24
LINC00504-202ENST00000506292 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
LINC00504-202ENST00000506292 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
LINC00504-202ENST00000506292 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
LINC00504-202ENST00000506292 PIAS4Q8N2W9 510 aaPredicted RBP16.51■□□□□ 0.23
LINC00504-202ENST00000506292 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
LINC00504-202ENST00000506292 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
LINC00504-202ENST00000506292 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
LINC00504-202ENST00000506292 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
LINC00504-202ENST00000506292 ADRA2BP18089 450 aa16.35■□□□□ 0.21
LINC00504-202ENST00000506292 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
LINC00504-202ENST00000506292 CFTRP13569 1480 aa16.07■□□□□ 0.16
LINC00504-202ENST00000506292 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
LINC00504-202ENST00000506292 LAMC3Q9Y6N6 1575 aa16■□□□□ 0.15
LINC00504-202ENST00000506292 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
LINC00504-202ENST00000506292 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
LINC00504-202ENST00000506292 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
LINC00504-202ENST00000506292 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
LINC00504-202ENST00000506292 NESP48681 1621 aa15.91■□□□□ 0.14
LINC00504-202ENST00000506292 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
LINC00504-202ENST00000506292 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
LINC00504-202ENST00000506292 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
LINC00504-202ENST00000506292 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
LINC00504-202ENST00000506292 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
LINC00504-202ENST00000506292 CUX1P39880 1505 aa15.83■□□□□ 0.12
LINC00504-202ENST00000506292 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
LINC00504-202ENST00000506292 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
LINC00504-202ENST00000506292 DNMBPQ6XZF7 1577 aa15.77■□□□□ 0.11
LINC00504-202ENST00000506292 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
LINC00504-202ENST00000506292 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
LINC00504-202ENST00000506292 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
LINC00504-202ENST00000506292 EEA1Q15075 1411 aa15.66■□□□□ 0.1
LINC00504-202ENST00000506292 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
LINC00504-202ENST00000506292 SOGA1O94964 1423 aa15.64■□□□□ 0.09
LINC00504-202ENST00000506292 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
LINC00504-202ENST00000506292 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
LINC00504-202ENST00000506292 WDR62O43379 1518 aa15.61■□□□□ 0.09
LINC00504-202ENST00000506292 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
LINC00504-202ENST00000506292 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
LINC00504-202ENST00000506292 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
LINC00504-202ENST00000506292 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
LINC00504-202ENST00000506292 KIF21BO75037 1637 aa15.54■□□□□ 0.08
LINC00504-202ENST00000506292 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
LINC00504-202ENST00000506292 KIF27Q86VH2 1401 aa15.52■□□□□ 0.08
LINC00504-202ENST00000506292 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
LINC00504-202ENST00000506292 CUX2O14529 1486 aa15.51■□□□□ 0.07
LINC00504-202ENST00000506292 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
LINC00504-202ENST00000506292 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
LINC00504-202ENST00000506292 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
LINC00504-202ENST00000506292 GOLGA3Q08378 1498 aa15.44■□□□□ 0.06
LINC00504-202ENST00000506292 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
LINC00504-202ENST00000506292 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
LINC00504-202ENST00000506292 IFT140Q96RY7 1462 aa15.42■□□□□ 0.06
LINC00504-202ENST00000506292 CUL7Q14999 1698 aa15.41■□□□□ 0.06
LINC00504-202ENST00000506292 LOC105371045A0A1W2PR82 267 aa15.41■□□□□ 0.06
LINC00504-202ENST00000506292 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
LINC00504-202ENST00000506292 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
LINC00504-202ENST00000506292 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
LINC00504-202ENST00000506292 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
LINC00504-202ENST00000506292 IGF1RP08069 1367 aa15.32■□□□□ 0.04
LINC00504-202ENST00000506292 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
LINC00504-202ENST00000506292 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
LINC00504-202ENST00000506292 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
LINC00504-202ENST00000506292 ADAMTS12P58397 1594 aa15.3■□□□□ 0.04
LINC00504-202ENST00000506292 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
LINC00504-202ENST00000506292 GRIN2BQ13224 1484 aa15.27■□□□□ 0.04
LINC00504-202ENST00000506292 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
LINC00504-202ENST00000506292 CARMIL1Q5VZK9 1371 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms