RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
TRIM6-208ENST00000506134 AEBP2Q6ZN18 517 aaPredicted RBP21.52■■□□□ 1.04
TRIM6-208ENST00000506134 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
TRIM6-208ENST00000506134 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
TRIM6-208ENST00000506134 ABCC9O60706 1549 aa19.94■□□□□ 0.78
TRIM6-208ENST00000506134 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
TRIM6-208ENST00000506134 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
TRIM6-208ENST00000506134 NACADO15069 1562 aa19.28■□□□□ 0.68
TRIM6-208ENST00000506134 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
TRIM6-208ENST00000506134 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
TRIM6-208ENST00000506134 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
TRIM6-208ENST00000506134 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
TRIM6-208ENST00000506134 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
TRIM6-208ENST00000506134 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRIM6-208ENST00000506134 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
TRIM6-208ENST00000506134 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
TRIM6-208ENST00000506134 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
TRIM6-208ENST00000506134 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
TRIM6-208ENST00000506134 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
TRIM6-208ENST00000506134 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
TRIM6-208ENST00000506134 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
TRIM6-208ENST00000506134 BAZ1AQ9NRL2 1556 aaPredicted RBP18.02■□□□□ 0.47
TRIM6-208ENST00000506134 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
TRIM6-208ENST00000506134 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
TRIM6-208ENST00000506134 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
TRIM6-208ENST00000506134 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
TRIM6-208ENST00000506134 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
TRIM6-208ENST00000506134 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
TRIM6-208ENST00000506134 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
TRIM6-208ENST00000506134 WIZO95785 1651 aa17.82■□□□□ 0.44
TRIM6-208ENST00000506134 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
TRIM6-208ENST00000506134 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
TRIM6-208ENST00000506134 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
TRIM6-208ENST00000506134 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
TRIM6-208ENST00000506134 TOP2AP11388 1531 aaKnown RBP17.59■□□□□ 0.41
TRIM6-208ENST00000506134 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
TRIM6-208ENST00000506134 NESP48681 1621 aa17.34■□□□□ 0.37
TRIM6-208ENST00000506134 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.37
TRIM6-208ENST00000506134 CFTRP13569 1480 aa17.27■□□□□ 0.35
TRIM6-208ENST00000506134 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
TRIM6-208ENST00000506134 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
TRIM6-208ENST00000506134 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
TRIM6-208ENST00000506134 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
TRIM6-208ENST00000506134 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
TRIM6-208ENST00000506134 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
TRIM6-208ENST00000506134 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
TRIM6-208ENST00000506134 FOXD1Q16676 465 aa17.02■□□□□ 0.31
TRIM6-208ENST00000506134 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
TRIM6-208ENST00000506134 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
TRIM6-208ENST00000506134 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
TRIM6-208ENST00000506134 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
TRIM6-208ENST00000506134 WDR62O43379 1518 aa16.89■□□□□ 0.29
TRIM6-208ENST00000506134 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
TRIM6-208ENST00000506134 CUX1P39880 1505 aa16.85■□□□□ 0.29
TRIM6-208ENST00000506134 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
TRIM6-208ENST00000506134 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
TRIM6-208ENST00000506134 CUX2O14529 1486 aa16.82■□□□□ 0.28
TRIM6-208ENST00000506134 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
TRIM6-208ENST00000506134 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
TRIM6-208ENST00000506134 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
TRIM6-208ENST00000506134 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
TRIM6-208ENST00000506134 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
TRIM6-208ENST00000506134 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
TRIM6-208ENST00000506134 SOGA1O94964 1423 aa16.72■□□□□ 0.27
TRIM6-208ENST00000506134 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
TRIM6-208ENST00000506134 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
TRIM6-208ENST00000506134 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
TRIM6-208ENST00000506134 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
TRIM6-208ENST00000506134 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
TRIM6-208ENST00000506134 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.259e-8■■□□□ 11.9
TRIM6-208ENST00000506134 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.25
TRIM6-208ENST00000506134 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
TRIM6-208ENST00000506134 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
TRIM6-208ENST00000506134 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
TRIM6-208ENST00000506134 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
TRIM6-208ENST00000506134 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
TRIM6-208ENST00000506134 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
TRIM6-208ENST00000506134 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
TRIM6-208ENST00000506134 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
TRIM6-208ENST00000506134 IGF1RP08069 1367 aa16.41■□□□□ 0.22
TRIM6-208ENST00000506134 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
TRIM6-208ENST00000506134 FAM9AQ8IZU1 332 aaPredicted RBP16.4■□□□□ 0.22
TRIM6-208ENST00000506134 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
TRIM6-208ENST00000506134 FBLN2P98095 1184 aa16.38■□□□□ 0.21
TRIM6-208ENST00000506134 ERICH3Q5RHP9 1530 aa16.37■□□□□ 0.21
TRIM6-208ENST00000506134 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
TRIM6-208ENST00000506134 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
TRIM6-208ENST00000506134 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
TRIM6-208ENST00000506134 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
TRIM6-208ENST00000506134 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
TRIM6-208ENST00000506134 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
TRIM6-208ENST00000506134 EEA1Q15075 1411 aa16.3■□□□□ 0.2
TRIM6-208ENST00000506134 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
TRIM6-208ENST00000506134 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
TRIM6-208ENST00000506134 CHD1O14646 1710 aa16.27■□□□□ 0.2
TRIM6-208ENST00000506134 CUL7Q14999 1698 aa16.26■□□□□ 0.19
TRIM6-208ENST00000506134 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
TRIM6-208ENST00000506134 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
TRIM6-208ENST00000506134 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
TRIM6-208ENST00000506134 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms