RNA–Protein interactions for RNA: ENST00000506029.1

SNRPCP16-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 16, humanhuman

BASIC

Gene SNRPCP16, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP16-201ENST00000506029 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
SNRPCP16-201ENST00000506029 CCDC180Q9P1Z9 1646 aa21.19■□□□□ 0.98
SNRPCP16-201ENST00000506029 ABCC9O60706 1549 aa20.55■□□□□ 0.88
SNRPCP16-201ENST00000506029 NACADO15069 1562 aa19.9■□□□□ 0.78
SNRPCP16-201ENST00000506029 RB1CC1Q8TDY2 1594 aa19.9■□□□□ 0.78
SNRPCP16-201ENST00000506029 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
SNRPCP16-201ENST00000506029 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
SNRPCP16-201ENST00000506029 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
SNRPCP16-201ENST00000506029 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
SNRPCP16-201ENST00000506029 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
SNRPCP16-201ENST00000506029 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
SNRPCP16-201ENST00000506029 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
SNRPCP16-201ENST00000506029 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
SNRPCP16-201ENST00000506029 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNRPCP16-201ENST00000506029 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
SNRPCP16-201ENST00000506029 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
SNRPCP16-201ENST00000506029 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
SNRPCP16-201ENST00000506029 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
SNRPCP16-201ENST00000506029 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
SNRPCP16-201ENST00000506029 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
SNRPCP16-201ENST00000506029 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
SNRPCP16-201ENST00000506029 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
SNRPCP16-201ENST00000506029 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
SNRPCP16-201ENST00000506029 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.53
SNRPCP16-201ENST00000506029 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
SNRPCP16-201ENST00000506029 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
SNRPCP16-201ENST00000506029 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
SNRPCP16-201ENST00000506029 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
SNRPCP16-201ENST00000506029 WIZO95785 1651 aa18.06■□□□□ 0.48
SNRPCP16-201ENST00000506029 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
SNRPCP16-201ENST00000506029 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
SNRPCP16-201ENST00000506029 NESP48681 1621 aa17.79■□□□□ 0.44
SNRPCP16-201ENST00000506029 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
SNRPCP16-201ENST00000506029 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
SNRPCP16-201ENST00000506029 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
SNRPCP16-201ENST00000506029 CFTRP13569 1480 aa17.71■□□□□ 0.43
SNRPCP16-201ENST00000506029 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
SNRPCP16-201ENST00000506029 CUX2O14529 1486 aa17.63■□□□□ 0.41
SNRPCP16-201ENST00000506029 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
SNRPCP16-201ENST00000506029 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
SNRPCP16-201ENST00000506029 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
SNRPCP16-201ENST00000506029 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
SNRPCP16-201ENST00000506029 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
SNRPCP16-201ENST00000506029 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
SNRPCP16-201ENST00000506029 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
SNRPCP16-201ENST00000506029 WDR62O43379 1518 aa17.51■□□□□ 0.39
SNRPCP16-201ENST00000506029 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
SNRPCP16-201ENST00000506029 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
SNRPCP16-201ENST00000506029 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
SNRPCP16-201ENST00000506029 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
SNRPCP16-201ENST00000506029 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
SNRPCP16-201ENST00000506029 CUX1P39880 1505 aa17.16■□□□□ 0.34
SNRPCP16-201ENST00000506029 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
SNRPCP16-201ENST00000506029 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
SNRPCP16-201ENST00000506029 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
SNRPCP16-201ENST00000506029 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
SNRPCP16-201ENST00000506029 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
SNRPCP16-201ENST00000506029 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
SNRPCP16-201ENST00000506029 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
SNRPCP16-201ENST00000506029 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
SNRPCP16-201ENST00000506029 SOGA1O94964 1423 aa17.05■□□□□ 0.32
SNRPCP16-201ENST00000506029 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
SNRPCP16-201ENST00000506029 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
SNRPCP16-201ENST00000506029 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.32
SNRPCP16-201ENST00000506029 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
SNRPCP16-201ENST00000506029 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNRPCP16-201ENST00000506029 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
SNRPCP16-201ENST00000506029 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
SNRPCP16-201ENST00000506029 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
SNRPCP16-201ENST00000506029 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
SNRPCP16-201ENST00000506029 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
SNRPCP16-201ENST00000506029 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
SNRPCP16-201ENST00000506029 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
SNRPCP16-201ENST00000506029 PBRM1Q86U86 1689 aa16.84■□□□□ 0.29
SNRPCP16-201ENST00000506029 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
SNRPCP16-201ENST00000506029 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
SNRPCP16-201ENST00000506029 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
SNRPCP16-201ENST00000506029 CHD1O14646 1710 aa16.77■□□□□ 0.28
SNRPCP16-201ENST00000506029 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
SNRPCP16-201ENST00000506029 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
SNRPCP16-201ENST00000506029 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
SNRPCP16-201ENST00000506029 CHMP7Q8WUX9 453 aaPredicted RBP16.71■□□□□ 0.27
SNRPCP16-201ENST00000506029 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
SNRPCP16-201ENST00000506029 FBLN2P98095 1184 aa16.68■□□□□ 0.26
SNRPCP16-201ENST00000506029 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
SNRPCP16-201ENST00000506029 CUL7Q14999 1698 aa16.65■□□□□ 0.26
SNRPCP16-201ENST00000506029 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
SNRPCP16-201ENST00000506029 IGF1RP08069 1367 aa16.63■□□□□ 0.25
SNRPCP16-201ENST00000506029 NUP160Q12769 1436 aa16.62■□□□□ 0.25
SNRPCP16-201ENST00000506029 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
SNRPCP16-201ENST00000506029 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
SNRPCP16-201ENST00000506029 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
SNRPCP16-201ENST00000506029 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
SNRPCP16-201ENST00000506029 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
SNRPCP16-201ENST00000506029 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
SNRPCP16-201ENST00000506029 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
SNRPCP16-201ENST00000506029 EEA1Q15075 1411 aa16.51■□□□□ 0.23
SNRPCP16-201ENST00000506029 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
SNRPCP16-201ENST00000506029 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
SNRPCP16-201ENST00000506029 KIAA0586Q9BVV6 1533 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms