RNA–Protein interactions for RNA: ENST00000505965.1

TSC22D3-212, Transcript of TSC22 domain family member 3, humanhuman

TSL 3

Gene TSC22D3, Length 425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-212ENST00000505965 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
TSC22D3-212ENST00000505965 CCDC180Q9P1Z9 1646 aa23.8■■□□□ 1.4
TSC22D3-212ENST00000505965 ABCC9O60706 1549 aa23.02■■□□□ 1.28
TSC22D3-212ENST00000505965 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.2
TSC22D3-212ENST00000505965 DCAF8L2P0C7V8 631 aa22.42■■□□□ 1.18
TSC22D3-212ENST00000505965 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
TSC22D3-212ENST00000505965 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
TSC22D3-212ENST00000505965 NACADO15069 1562 aa22.33■■□□□ 1.17
TSC22D3-212ENST00000505965 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
TSC22D3-212ENST00000505965 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
TSC22D3-212ENST00000505965 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
TSC22D3-212ENST00000505965 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
TSC22D3-212ENST00000505965 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
TSC22D3-212ENST00000505965 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
TSC22D3-212ENST00000505965 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
TSC22D3-212ENST00000505965 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
TSC22D3-212ENST00000505965 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
TSC22D3-212ENST00000505965 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
TSC22D3-212ENST00000505965 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
TSC22D3-212ENST00000505965 MROH2BQ7Z745 1585 aa20.86■□□□□ 0.93
TSC22D3-212ENST00000505965 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
TSC22D3-212ENST00000505965 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.91
TSC22D3-212ENST00000505965 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
TSC22D3-212ENST00000505965 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
TSC22D3-212ENST00000505965 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
TSC22D3-212ENST00000505965 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
TSC22D3-212ENST00000505965 WIZO95785 1651 aa20.62■□□□□ 0.89
TSC22D3-212ENST00000505965 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
TSC22D3-212ENST00000505965 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
TSC22D3-212ENST00000505965 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
TSC22D3-212ENST00000505965 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
TSC22D3-212ENST00000505965 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
TSC22D3-212ENST00000505965 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.8
TSC22D3-212ENST00000505965 NESP48681 1621 aa20.05■□□□□ 0.8
TSC22D3-212ENST00000505965 CFTRP13569 1480 aa20.03■□□□□ 0.8
TSC22D3-212ENST00000505965 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
TSC22D3-212ENST00000505965 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
TSC22D3-212ENST00000505965 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
TSC22D3-212ENST00000505965 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
TSC22D3-212ENST00000505965 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
TSC22D3-212ENST00000505965 ERCC6Q03468 1493 aa19.73■□□□□ 0.75
TSC22D3-212ENST00000505965 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
TSC22D3-212ENST00000505965 MRC2Q9UBG0 1479 aa19.63■□□□□ 0.73
TSC22D3-212ENST00000505965 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
TSC22D3-212ENST00000505965 URB2Q14146 1524 aaKnown RBP19.62■□□□□ 0.73
TSC22D3-212ENST00000505965 WDR62O43379 1518 aa19.56■□□□□ 0.72
TSC22D3-212ENST00000505965 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
TSC22D3-212ENST00000505965 CUX1P39880 1505 aa19.54■□□□□ 0.72
TSC22D3-212ENST00000505965 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
TSC22D3-212ENST00000505965 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
TSC22D3-212ENST00000505965 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
TSC22D3-212ENST00000505965 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
TSC22D3-212ENST00000505965 CUX2O14529 1486 aa19.45■□□□□ 0.7
TSC22D3-212ENST00000505965 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
TSC22D3-212ENST00000505965 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
TSC22D3-212ENST00000505965 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
TSC22D3-212ENST00000505965 FGD5Q6ZNL6 1462 aa19.39■□□□□ 0.69
TSC22D3-212ENST00000505965 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
TSC22D3-212ENST00000505965 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
TSC22D3-212ENST00000505965 SOGA1O94964 1423 aa19.34■□□□□ 0.69
TSC22D3-212ENST00000505965 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
TSC22D3-212ENST00000505965 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
TSC22D3-212ENST00000505965 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
TSC22D3-212ENST00000505965 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
TSC22D3-212ENST00000505965 ABCA10Q8WWZ4 1543 aa19.23■□□□□ 0.67
TSC22D3-212ENST00000505965 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
TSC22D3-212ENST00000505965 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
TSC22D3-212ENST00000505965 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
TSC22D3-212ENST00000505965 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
TSC22D3-212ENST00000505965 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
TSC22D3-212ENST00000505965 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
TSC22D3-212ENST00000505965 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
TSC22D3-212ENST00000505965 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
TSC22D3-212ENST00000505965 IGF1RP08069 1367 aa19.05■□□□□ 0.64
TSC22D3-212ENST00000505965 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
TSC22D3-212ENST00000505965 ERICH3Q5RHP9 1530 aa18.98■□□□□ 0.63
TSC22D3-212ENST00000505965 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
TSC22D3-212ENST00000505965 SNAPC4Q5SXM2 1469 aa18.96■□□□□ 0.63
TSC22D3-212ENST00000505965 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
TSC22D3-212ENST00000505965 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
TSC22D3-212ENST00000505965 EEA1Q15075 1411 aa18.91■□□□□ 0.62
TSC22D3-212ENST00000505965 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
TSC22D3-212ENST00000505965 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.61
TSC22D3-212ENST00000505965 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
TSC22D3-212ENST00000505965 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
TSC22D3-212ENST00000505965 ADAMTS12P58397 1594 aa18.87■□□□□ 0.61
TSC22D3-212ENST00000505965 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
TSC22D3-212ENST00000505965 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
TSC22D3-212ENST00000505965 CUL7Q14999 1698 aa18.82■□□□□ 0.6
TSC22D3-212ENST00000505965 FBLN2P98095 1184 aa18.82■□□□□ 0.6
TSC22D3-212ENST00000505965 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
TSC22D3-212ENST00000505965 CHD1O14646 1710 aa18.79■□□□□ 0.6
TSC22D3-212ENST00000505965 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.6
TSC22D3-212ENST00000505965 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
TSC22D3-212ENST00000505965 NUP160Q12769 1436 aa18.74■□□□□ 0.59
TSC22D3-212ENST00000505965 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
TSC22D3-212ENST00000505965 KIF21BO75037 1637 aa18.69■□□□□ 0.58
TSC22D3-212ENST00000505965 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.58
TSC22D3-212ENST00000505965 KIAA0586Q9BVV6 1533 aa18.63■□□□□ 0.57
TSC22D3-212ENST00000505965 GOLGA3Q08378 1498 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms