RNA–Protein interactions for RNA: ENST00000505830.5

SIL1-207, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 2

Gene SIL1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-207ENST00000505830 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
SIL1-207ENST00000505830 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
SIL1-207ENST00000505830 ABCC9O60706 1549 aa29.1■■■□□ 2.25
SIL1-207ENST00000505830 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
SIL1-207ENST00000505830 ZCCHC6Q5VYS8 1495 aaKnown RBP27.81■■■□□ 2.04
SIL1-207ENST00000505830 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
SIL1-207ENST00000505830 NACADO15069 1562 aa27.77■■■□□ 2.04
SIL1-207ENST00000505830 MYO15BQ96JP2 1530 aa27.51■■■□□ 2
SIL1-207ENST00000505830 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
SIL1-207ENST00000505830 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
SIL1-207ENST00000505830 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
SIL1-207ENST00000505830 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
SIL1-207ENST00000505830 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
SIL1-207ENST00000505830 DNAJC5BQ9UF47 199 aa26.76■■□□□ 1.87
SIL1-207ENST00000505830 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
SIL1-207ENST00000505830 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
SIL1-207ENST00000505830 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
SIL1-207ENST00000505830 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
SIL1-207ENST00000505830 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
SIL1-207ENST00000505830 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
SIL1-207ENST00000505830 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
SIL1-207ENST00000505830 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
SIL1-207ENST00000505830 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
SIL1-207ENST00000505830 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
SIL1-207ENST00000505830 WIZO95785 1651 aa25.58■■□□□ 1.69
SIL1-207ENST00000505830 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
SIL1-207ENST00000505830 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
SIL1-207ENST00000505830 BAZ1BQ9UIG0 1483 aaKnown RBP25.53■■□□□ 1.68
SIL1-207ENST00000505830 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
SIL1-207ENST00000505830 NESP48681 1621 aa25.23■■□□□ 1.63
SIL1-207ENST00000505830 TOP2AP11388 1531 aaKnown RBP25.18■■□□□ 1.62
SIL1-207ENST00000505830 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
SIL1-207ENST00000505830 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
SIL1-207ENST00000505830 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
SIL1-207ENST00000505830 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
SIL1-207ENST00000505830 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
SIL1-207ENST00000505830 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
SIL1-207ENST00000505830 CFTRP13569 1480 aa24.82■■□□□ 1.56
SIL1-207ENST00000505830 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
SIL1-207ENST00000505830 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
SIL1-207ENST00000505830 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
SIL1-207ENST00000505830 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
SIL1-207ENST00000505830 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.52
SIL1-207ENST00000505830 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
SIL1-207ENST00000505830 CUX2O14529 1486 aa24.55■■□□□ 1.52
SIL1-207ENST00000505830 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
SIL1-207ENST00000505830 WDR62O43379 1518 aa24.46■■□□□ 1.51
SIL1-207ENST00000505830 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
SIL1-207ENST00000505830 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
SIL1-207ENST00000505830 CUX1P39880 1505 aa24.22■■□□□ 1.47
SIL1-207ENST00000505830 ABCC8Q09428 1581 aa24.18■■□□□ 1.46
SIL1-207ENST00000505830 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
SIL1-207ENST00000505830 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
SIL1-207ENST00000505830 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
SIL1-207ENST00000505830 FGD5Q6ZNL6 1462 aa24.1■■□□□ 1.45
SIL1-207ENST00000505830 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
SIL1-207ENST00000505830 SOGA1O94964 1423 aa24.05■■□□□ 1.44
SIL1-207ENST00000505830 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
SIL1-207ENST00000505830 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
SIL1-207ENST00000505830 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
SIL1-207ENST00000505830 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.43
SIL1-207ENST00000505830 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
SIL1-207ENST00000505830 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
SIL1-207ENST00000505830 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
SIL1-207ENST00000505830 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
SIL1-207ENST00000505830 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
SIL1-207ENST00000505830 WDR97A6NE52 1622 aa23.83■■□□□ 1.41
SIL1-207ENST00000505830 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
SIL1-207ENST00000505830 FBLN2P98095 1184 aa23.76■■□□□ 1.39
SIL1-207ENST00000505830 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
SIL1-207ENST00000505830 SNAPC4Q5SXM2 1469 aa23.72■■□□□ 1.39
SIL1-207ENST00000505830 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.39
SIL1-207ENST00000505830 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
SIL1-207ENST00000505830 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
SIL1-207ENST00000505830 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
SIL1-207ENST00000505830 CHD1O14646 1710 aa23.66■■□□□ 1.38
SIL1-207ENST00000505830 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
SIL1-207ENST00000505830 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
SIL1-207ENST00000505830 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
SIL1-207ENST00000505830 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
SIL1-207ENST00000505830 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
SIL1-207ENST00000505830 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
SIL1-207ENST00000505830 IGF1RP08069 1367 aa23.48■■□□□ 1.35
SIL1-207ENST00000505830 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
SIL1-207ENST00000505830 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
SIL1-207ENST00000505830 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
SIL1-207ENST00000505830 FHAD1B1AJZ9 1412 aa23.43■■□□□ 1.34
SIL1-207ENST00000505830 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
SIL1-207ENST00000505830 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
SIL1-207ENST00000505830 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
SIL1-207ENST00000505830 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
SIL1-207ENST00000505830 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
SIL1-207ENST00000505830 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
SIL1-207ENST00000505830 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
SIL1-207ENST00000505830 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
SIL1-207ENST00000505830 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
SIL1-207ENST00000505830 NUP160Q12769 1436 aa23.27■■□□□ 1.32
SIL1-207ENST00000505830 CUL7Q14999 1698 aa23.26■■□□□ 1.31
SIL1-207ENST00000505830 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
SIL1-207ENST00000505830 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms