RNA–Protein interactions for RNA: ENST00000505412.1

ZCCHC4-202, Transcript of zinc finger CCHC-type containing 4, humanhuman

TSL 3

Gene ZCCHC4, Length 1,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4-202ENST00000505412 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
ZCCHC4-202ENST00000505412 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
ZCCHC4-202ENST00000505412 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
ZCCHC4-202ENST00000505412 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
ZCCHC4-202ENST00000505412 ABCC9O60706 1549 aa13.47□□□□□ -0.25
ZCCHC4-202ENST00000505412 DCAF1Q9Y4B6 1507 aa13.38□□□□□ -0.27
ZCCHC4-202ENST00000505412 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.29
ZCCHC4-202ENST00000505412 NACADO15069 1562 aa13.22□□□□□ -0.29
ZCCHC4-202ENST00000505412 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
ZCCHC4-202ENST00000505412 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
ZCCHC4-202ENST00000505412 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
ZCCHC4-202ENST00000505412 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
ZCCHC4-202ENST00000505412 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
ZCCHC4-202ENST00000505412 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
ZCCHC4-202ENST00000505412 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
ZCCHC4-202ENST00000505412 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
ZCCHC4-202ENST00000505412 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
ZCCHC4-202ENST00000505412 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
ZCCHC4-202ENST00000505412 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
ZCCHC4-202ENST00000505412 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
ZCCHC4-202ENST00000505412 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
ZCCHC4-202ENST00000505412 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
ZCCHC4-202ENST00000505412 WIZO95785 1651 aa12.37□□□□□ -0.43
ZCCHC4-202ENST00000505412 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
ZCCHC4-202ENST00000505412 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
ZCCHC4-202ENST00000505412 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
ZCCHC4-202ENST00000505412 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
ZCCHC4-202ENST00000505412 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
ZCCHC4-202ENST00000505412 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
ZCCHC4-202ENST00000505412 BAZ1BQ9UIG0 1483 aaKnown RBP12.24□□□□□ -0.45
ZCCHC4-202ENST00000505412 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
ZCCHC4-202ENST00000505412 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
ZCCHC4-202ENST00000505412 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
ZCCHC4-202ENST00000505412 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
ZCCHC4-202ENST00000505412 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
ZCCHC4-202ENST00000505412 CADPSQ9ULU8 1353 aa11.91□□□□□ -0.5
ZCCHC4-202ENST00000505412 CFTRP13569 1480 aa11.9□□□□□ -0.5
ZCCHC4-202ENST00000505412 ABCC8Q09428 1581 aa11.84□□□□□ -0.51
ZCCHC4-202ENST00000505412 WRNQ14191 1432 aaPredicted RBP eCLIP11.83□□□□□ -0.51
ZCCHC4-202ENST00000505412 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
ZCCHC4-202ENST00000505412 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
ZCCHC4-202ENST00000505412 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.53
ZCCHC4-202ENST00000505412 NESP48681 1621 aa11.76□□□□□ -0.53
ZCCHC4-202ENST00000505412 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
ZCCHC4-202ENST00000505412 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
ZCCHC4-202ENST00000505412 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
ZCCHC4-202ENST00000505412 TOP2BQ02880 1626 aa11.71□□□□□ -0.54
ZCCHC4-202ENST00000505412 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
ZCCHC4-202ENST00000505412 CUX1P39880 1505 aa11.67□□□□□ -0.54
ZCCHC4-202ENST00000505412 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
ZCCHC4-202ENST00000505412 EEA1Q15075 1411 aa11.66□□□□□ -0.54
ZCCHC4-202ENST00000505412 SOGA1O94964 1423 aa11.63□□□□□ -0.55
ZCCHC4-202ENST00000505412 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
ZCCHC4-202ENST00000505412 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
ZCCHC4-202ENST00000505412 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
ZCCHC4-202ENST00000505412 ERCC6Q03468 1493 aa11.62□□□□□ -0.55
ZCCHC4-202ENST00000505412 KIF21AQ7Z4S6 1674 aa11.61□□□□□ -0.55
ZCCHC4-202ENST00000505412 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
ZCCHC4-202ENST00000505412 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
ZCCHC4-202ENST00000505412 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
ZCCHC4-202ENST00000505412 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
ZCCHC4-202ENST00000505412 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
ZCCHC4-202ENST00000505412 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
ZCCHC4-202ENST00000505412 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
ZCCHC4-202ENST00000505412 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
ZCCHC4-202ENST00000505412 CUX2O14529 1486 aa11.53□□□□□ -0.56
ZCCHC4-202ENST00000505412 UBTFP17480 764 aaKnown RBP11.5□□□□□ -0.57
ZCCHC4-202ENST00000505412 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
ZCCHC4-202ENST00000505412 ABCA10Q8WWZ4 1543 aa11.48□□□□□ -0.57
ZCCHC4-202ENST00000505412 WDR62O43379 1518 aa11.48□□□□□ -0.57
ZCCHC4-202ENST00000505412 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
ZCCHC4-202ENST00000505412 KIF21BO75037 1637 aa11.44□□□□□ -0.58
ZCCHC4-202ENST00000505412 IGF1RP08069 1367 aa11.44□□□□□ -0.58
ZCCHC4-202ENST00000505412 IFT140Q96RY7 1462 aa11.43□□□□□ -0.58
ZCCHC4-202ENST00000505412 TDRD9Q8NDG6 1382 aaKnown RBP11.43□□□□□ -0.58
ZCCHC4-202ENST00000505412 THOC2Q8NI27 1593 aaKnown RBP11.43□□□□□ -0.58
ZCCHC4-202ENST00000505412 PHF23Q9BUL5 403 aaPredicted RBP11.43□□□□□ -0.58
ZCCHC4-202ENST00000505412 TNIKQ9UKE5 1360 aa11.42□□□□□ -0.58
ZCCHC4-202ENST00000505412 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
ZCCHC4-202ENST00000505412 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
ZCCHC4-202ENST00000505412 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
ZCCHC4-202ENST00000505412 ERICH3Q5RHP9 1530 aa11.4□□□□□ -0.58
ZCCHC4-202ENST00000505412 RAPGEF2Q9Y4G8 1499 aa11.4□□□□□ -0.58
ZCCHC4-202ENST00000505412 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.59
ZCCHC4-202ENST00000505412 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
ZCCHC4-202ENST00000505412 ABCA5Q8WWZ7 1642 aa11.36□□□□□ -0.59
ZCCHC4-202ENST00000505412 AQRO60306 1485 aaKnown RBP eCLIP11.35□□□□□ -0.59
ZCCHC4-202ENST00000505412 CUL7Q14999 1698 aa11.35□□□□□ -0.59
ZCCHC4-202ENST00000505412 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
ZCCHC4-202ENST00000505412 GRIN2BQ13224 1484 aa11.33□□□□□ -0.6
ZCCHC4-202ENST00000505412 RANGAP1P46060 587 aaPredicted RBP11.32□□□□□ -0.6
ZCCHC4-202ENST00000505412 ZNF608Q9ULD9 1512 aaPredicted RBP11.32□□□□□ -0.6
ZCCHC4-202ENST00000505412 PBRM1Q86U86 1689 aa11.29□□□□□ -0.6
ZCCHC4-202ENST00000505412 FHAD1B1AJZ9 1412 aa11.29□□□□□ -0.6
ZCCHC4-202ENST00000505412 CLIP1P30622 1438 aa11.29□□□□□ -0.6
ZCCHC4-202ENST00000505412 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
ZCCHC4-202ENST00000505412 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
ZCCHC4-202ENST00000505412 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
ZCCHC4-202ENST00000505412 MAGI1Q96QZ7 1491 aaPredicted RBP11.24□□□□□ -0.61
ZCCHC4-202ENST00000505412 FBLN2P98095 1184 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms