RNA–Protein interactions for RNA: ENST00000505368.1

RAB5CP2-201, Transcript of RAB5C, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB5CP2, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP2-201ENST00000505368 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
RAB5CP2-201ENST00000505368 ABCC9O60706 1549 aa20.75■□□□□ 0.91
RAB5CP2-201ENST00000505368 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
RAB5CP2-201ENST00000505368 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
RAB5CP2-201ENST00000505368 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
RAB5CP2-201ENST00000505368 NACADO15069 1562 aa19.55■□□□□ 0.72
RAB5CP2-201ENST00000505368 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
RAB5CP2-201ENST00000505368 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
RAB5CP2-201ENST00000505368 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
RAB5CP2-201ENST00000505368 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
RAB5CP2-201ENST00000505368 BICRAQ9NZM4 1560 aa19.2■□□□□ 0.66
RAB5CP2-201ENST00000505368 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
RAB5CP2-201ENST00000505368 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
RAB5CP2-201ENST00000505368 SCRIBQ14160 1630 aa19■□□□□ 0.63
RAB5CP2-201ENST00000505368 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
RAB5CP2-201ENST00000505368 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
RAB5CP2-201ENST00000505368 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
RAB5CP2-201ENST00000505368 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
RAB5CP2-201ENST00000505368 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
RAB5CP2-201ENST00000505368 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
RAB5CP2-201ENST00000505368 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
RAB5CP2-201ENST00000505368 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
RAB5CP2-201ENST00000505368 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
RAB5CP2-201ENST00000505368 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
RAB5CP2-201ENST00000505368 SMARCA2P51531 1590 aa17.97■□□□□ 0.47
RAB5CP2-201ENST00000505368 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
RAB5CP2-201ENST00000505368 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
RAB5CP2-201ENST00000505368 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
RAB5CP2-201ENST00000505368 NESP48681 1621 aa17.9■□□□□ 0.46
RAB5CP2-201ENST00000505368 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
RAB5CP2-201ENST00000505368 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
RAB5CP2-201ENST00000505368 WIZO95785 1651 aa17.72■□□□□ 0.43
RAB5CP2-201ENST00000505368 CUX2O14529 1486 aa17.69■□□□□ 0.42
RAB5CP2-201ENST00000505368 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
RAB5CP2-201ENST00000505368 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
RAB5CP2-201ENST00000505368 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
RAB5CP2-201ENST00000505368 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
RAB5CP2-201ENST00000505368 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.39
RAB5CP2-201ENST00000505368 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
RAB5CP2-201ENST00000505368 CFTRP13569 1480 aa17.45■□□□□ 0.38
RAB5CP2-201ENST00000505368 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
RAB5CP2-201ENST00000505368 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
RAB5CP2-201ENST00000505368 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
RAB5CP2-201ENST00000505368 WDR62O43379 1518 aa17.38■□□□□ 0.37
RAB5CP2-201ENST00000505368 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
RAB5CP2-201ENST00000505368 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
RAB5CP2-201ENST00000505368 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
RAB5CP2-201ENST00000505368 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
RAB5CP2-201ENST00000505368 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
RAB5CP2-201ENST00000505368 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
RAB5CP2-201ENST00000505368 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
RAB5CP2-201ENST00000505368 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
RAB5CP2-201ENST00000505368 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
RAB5CP2-201ENST00000505368 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.31
RAB5CP2-201ENST00000505368 POLA1P09884 1462 aaPredicted RBP16.96■□□□□ 0.31
RAB5CP2-201ENST00000505368 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
RAB5CP2-201ENST00000505368 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
RAB5CP2-201ENST00000505368 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
RAB5CP2-201ENST00000505368 CUX1P39880 1505 aa16.91■□□□□ 0.3
RAB5CP2-201ENST00000505368 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
RAB5CP2-201ENST00000505368 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
RAB5CP2-201ENST00000505368 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
RAB5CP2-201ENST00000505368 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
RAB5CP2-201ENST00000505368 SOGA1O94964 1423 aa16.87■□□□□ 0.29
RAB5CP2-201ENST00000505368 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
RAB5CP2-201ENST00000505368 FBLN2P98095 1184 aa16.75■□□□□ 0.27
RAB5CP2-201ENST00000505368 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
RAB5CP2-201ENST00000505368 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
RAB5CP2-201ENST00000505368 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
RAB5CP2-201ENST00000505368 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
RAB5CP2-201ENST00000505368 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
RAB5CP2-201ENST00000505368 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
RAB5CP2-201ENST00000505368 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
RAB5CP2-201ENST00000505368 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
RAB5CP2-201ENST00000505368 GAPVD1Q14C86 1478 aa16.64■□□□□ 0.25
RAB5CP2-201ENST00000505368 CHD1O14646 1710 aa16.63■□□□□ 0.25
RAB5CP2-201ENST00000505368 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
RAB5CP2-201ENST00000505368 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
RAB5CP2-201ENST00000505368 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
RAB5CP2-201ENST00000505368 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
RAB5CP2-201ENST00000505368 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
RAB5CP2-201ENST00000505368 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
RAB5CP2-201ENST00000505368 CLASP1Q7Z460 1538 aa16.59■□□□□ 0.25
RAB5CP2-201ENST00000505368 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
RAB5CP2-201ENST00000505368 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
RAB5CP2-201ENST00000505368 BIVM-ERCC5R4GMW8 1640 aa16.53■□□□□ 0.24
RAB5CP2-201ENST00000505368 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
RAB5CP2-201ENST00000505368 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
RAB5CP2-201ENST00000505368 PBRM1Q86U86 1689 aa16.47■□□□□ 0.23
RAB5CP2-201ENST00000505368 NUP160Q12769 1436 aa16.45■□□□□ 0.22
RAB5CP2-201ENST00000505368 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
RAB5CP2-201ENST00000505368 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
RAB5CP2-201ENST00000505368 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
RAB5CP2-201ENST00000505368 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
RAB5CP2-201ENST00000505368 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
RAB5CP2-201ENST00000505368 IGF1RP08069 1367 aa16.36■□□□□ 0.21
RAB5CP2-201ENST00000505368 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
RAB5CP2-201ENST00000505368 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
RAB5CP2-201ENST00000505368 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
RAB5CP2-201ENST00000505368 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms