RNA–Protein interactions for RNA: ENST00000505127.5

ALPK1-208, Transcript of alpha kinase 1, humanhuman

TSL 2

Gene ALPK1, Length 2,295 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-208ENST00000505127 NISCHQ9Y2I1 1504 aa33.69■■■□□ 2.98
ALPK1-208ENST00000505127 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
ALPK1-208ENST00000505127 ZCCHC6Q5VYS8 1495 aaKnown RBP28.38■■■□□ 2.13
ALPK1-208ENST00000505127 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
ALPK1-208ENST00000505127 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.04
ALPK1-208ENST00000505127 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
ALPK1-208ENST00000505127 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
ALPK1-208ENST00000505127 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.95
ALPK1-208ENST00000505127 ABCC9O60706 1549 aa27.15■■□□□ 1.94
ALPK1-208ENST00000505127 NACADO15069 1562 aa26.95■■□□□ 1.91
ALPK1-208ENST00000505127 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
ALPK1-208ENST00000505127 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
ALPK1-208ENST00000505127 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
ALPK1-208ENST00000505127 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
ALPK1-208ENST00000505127 CECR2Q9BXF3 1484 aa26.22■■□□□ 1.79
ALPK1-208ENST00000505127 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
ALPK1-208ENST00000505127 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
ALPK1-208ENST00000505127 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
ALPK1-208ENST00000505127 WIZO95785 1651 aa25.89■■□□□ 1.74
ALPK1-208ENST00000505127 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
ALPK1-208ENST00000505127 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
ALPK1-208ENST00000505127 SMARCA4P51532 1647 aa25.76■■□□□ 1.71
ALPK1-208ENST00000505127 TOP2AP11388 1531 aaKnown RBP25.57■■□□□ 1.68
ALPK1-208ENST00000505127 TRIM41Q8WV44 630 aa25.49■■□□□ 1.67
ALPK1-208ENST00000505127 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
ALPK1-208ENST00000505127 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
ALPK1-208ENST00000505127 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
ALPK1-208ENST00000505127 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
ALPK1-208ENST00000505127 EIF4G1Q04637 1599 aaKnown RBP25.36■■□□□ 1.65
ALPK1-208ENST00000505127 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
ALPK1-208ENST00000505127 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
ALPK1-208ENST00000505127 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
ALPK1-208ENST00000505127 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
ALPK1-208ENST00000505127 NCAPD3P42695 1498 aa24.94■■□□□ 1.58
ALPK1-208ENST00000505127 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
ALPK1-208ENST00000505127 WRNQ14191 1432 aaPredicted RBP eCLIP24.79■■□□□ 1.56
ALPK1-208ENST00000505127 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
ALPK1-208ENST00000505127 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
ALPK1-208ENST00000505127 SOGA1O94964 1423 aa24.72■■□□□ 1.55
ALPK1-208ENST00000505127 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
ALPK1-208ENST00000505127 EEA1Q15075 1411 aa24.65■■□□□ 1.54
ALPK1-208ENST00000505127 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
ALPK1-208ENST00000505127 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
ALPK1-208ENST00000505127 TRIM26Q12899 539 aaPredicted RBP24.54■■□□□ 1.52
ALPK1-208ENST00000505127 CFTRP13569 1480 aa24.53■■□□□ 1.52
ALPK1-208ENST00000505127 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
ALPK1-208ENST00000505127 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
ALPK1-208ENST00000505127 TNIKQ9UKE5 1360 aa24.43■■□□□ 1.5
ALPK1-208ENST00000505127 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
ALPK1-208ENST00000505127 HRCP23327 699 aa24.4■■□□□ 1.5
ALPK1-208ENST00000505127 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
ALPK1-208ENST00000505127 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
ALPK1-208ENST00000505127 CUX1P39880 1505 aa24.34■■□□□ 1.49
ALPK1-208ENST00000505127 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
ALPK1-208ENST00000505127 UBTFP17480 764 aaKnown RBP24.33■■□□□ 1.49
ALPK1-208ENST00000505127 CEP164Q9UPV0 1460 aa24.31■■□□□ 1.48
ALPK1-208ENST00000505127 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
ALPK1-208ENST00000505127 KIF21BO75037 1637 aa24.3■■□□□ 1.48
ALPK1-208ENST00000505127 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
ALPK1-208ENST00000505127 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
ALPK1-208ENST00000505127 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
ALPK1-208ENST00000505127 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
ALPK1-208ENST00000505127 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.44
ALPK1-208ENST00000505127 ERICH3Q5RHP9 1530 aa24.04■■□□□ 1.44
ALPK1-208ENST00000505127 CLIP1P30622 1438 aa24.03■■□□□ 1.44
ALPK1-208ENST00000505127 NESP48681 1621 aa24.02■■□□□ 1.44
ALPK1-208ENST00000505127 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
ALPK1-208ENST00000505127 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
ALPK1-208ENST00000505127 CUX2O14529 1486 aa23.95■■□□□ 1.42
ALPK1-208ENST00000505127 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
ALPK1-208ENST00000505127 IGF1RP08069 1367 aa23.91■■□□□ 1.42
ALPK1-208ENST00000505127 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
ALPK1-208ENST00000505127 VPS8Q8N3P4 1428 aa23.88■■□□□ 1.41
ALPK1-208ENST00000505127 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
ALPK1-208ENST00000505127 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
ALPK1-208ENST00000505127 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.4
ALPK1-208ENST00000505127 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
ALPK1-208ENST00000505127 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
ALPK1-208ENST00000505127 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
ALPK1-208ENST00000505127 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
ALPK1-208ENST00000505127 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
ALPK1-208ENST00000505127 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
ALPK1-208ENST00000505127 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
ALPK1-208ENST00000505127 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
ALPK1-208ENST00000505127 APLP2Q06481 763 aa23.68■■□□□ 1.38
ALPK1-208ENST00000505127 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.38
ALPK1-208ENST00000505127 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
ALPK1-208ENST00000505127 WDR97A6NE52 1622 aa23.58■■□□□ 1.37
ALPK1-208ENST00000505127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.56■■□□□ 1.36
ALPK1-208ENST00000505127 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
ALPK1-208ENST00000505127 CUL7Q14999 1698 aa23.53■■□□□ 1.36
ALPK1-208ENST00000505127 ABCA5Q8WWZ7 1642 aa23.5■■□□□ 1.35
ALPK1-208ENST00000505127 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
ALPK1-208ENST00000505127 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
ALPK1-208ENST00000505127 KANK4Q5T7N3 995 aaPredicted RBP23.47■■□□□ 1.35
ALPK1-208ENST00000505127 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
ALPK1-208ENST00000505127 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
ALPK1-208ENST00000505127 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
ALPK1-208ENST00000505127 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
ALPK1-208ENST00000505127 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms