RNA–Protein interactions for RNA: ENST00000504767.5

PLXND1-206, Transcript of plexin D1, humanhuman

TSL 2

Gene PLXND1, Length 654 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-206ENST00000504767 NISCHQ9Y2I1 1504 aa44.46■■■■■ 4.71
PLXND1-206ENST00000504767 CCDC180Q9P1Z9 1646 aa39.42■■■■□ 3.9
PLXND1-206ENST00000504767 ABCC9O60706 1549 aa38.44■■■■□ 3.74
PLXND1-206ENST00000504767 DCAF8L2P0C7V8 631 aa37.12■■■■□ 3.53
PLXND1-206ENST00000504767 NACADO15069 1562 aa37.05■■■■□ 3.52
PLXND1-206ENST00000504767 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
PLXND1-206ENST00000504767 ZCCHC6Q5VYS8 1495 aaKnown RBP37.04■■■■□ 3.52
PLXND1-206ENST00000504767 MYO15BQ96JP2 1530 aa36.9■■■■□ 3.5
PLXND1-206ENST00000504767 DCAF1Q9Y4B6 1507 aa36.8■■■■□ 3.48
PLXND1-206ENST00000504767 UNC13AQ9UPW8 1703 aa36.22■■■■□ 3.39
PLXND1-206ENST00000504767 PABPN1Q86U42 306 aaKnown RBP eCLIP35.98■■■■□ 3.35
PLXND1-206ENST00000504767 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
PLXND1-206ENST00000504767 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
PLXND1-206ENST00000504767 SHROOM4Q9ULL8 1493 aa35.54■■■■□ 3.28
PLXND1-206ENST00000504767 DNAJC5BQ9UF47 199 aa35.2■■■■□ 3.23
PLXND1-206ENST00000504767 EIF4G1Q04637 1599 aaKnown RBP34.96■■■■□ 3.19
PLXND1-206ENST00000504767 CC2D2AQ9P2K1 1620 aa34.78■■■■□ 3.16
PLXND1-206ENST00000504767 CECR2Q9BXF3 1484 aa34.63■■■■□ 3.13
PLXND1-206ENST00000504767 SMARCA4P51532 1647 aa34.44■■■■□ 3.1
PLXND1-206ENST00000504767 BAZ1AQ9NRL2 1556 aaPredicted RBP34.43■■■■□ 3.1
PLXND1-206ENST00000504767 MROH2BQ7Z745 1585 aa34.27■■■■□ 3.08
PLXND1-206ENST00000504767 ATAD2BQ9ULI0 1458 aa34.24■■■■□ 3.07
PLXND1-206ENST00000504767 NCAPD3P42695 1498 aa34.21■■■■□ 3.07
PLXND1-206ENST00000504767 SMARCA2P51531 1590 aa34.19■■■■□ 3.06
PLXND1-206ENST00000504767 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
PLXND1-206ENST00000504767 HMGXB3Q12766 1538 aa34.01■■■■□ 3.04
PLXND1-206ENST00000504767 RSF1Q96T23 1441 aaPredicted RBP33.95■■■■□ 3.02
PLXND1-206ENST00000504767 BAZ1BQ9UIG0 1483 aaKnown RBP33.95■■■■□ 3.02
PLXND1-206ENST00000504767 WIZO95785 1651 aa33.9■■■■□ 3.02
PLXND1-206ENST00000504767 TOP2AP11388 1531 aaKnown RBP33.53■■■□□ 2.96
PLXND1-206ENST00000504767 NESP48681 1621 aa33.31■■■□□ 2.92
PLXND1-206ENST00000504767 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.91
PLXND1-206ENST00000504767 CADPSQ9ULU8 1353 aa33.22■■■□□ 2.91
PLXND1-206ENST00000504767 SUPT5HO00267 1087 aaKnown RBP33.22■■■□□ 2.91
PLXND1-206ENST00000504767 CCDC88BA6NC98 1476 aa33.18■■■□□ 2.9
PLXND1-206ENST00000504767 ERCC6Q03468 1493 aa33.11■■■□□ 2.89
PLXND1-206ENST00000504767 CFTRP13569 1480 aa33.05■■■□□ 2.88
PLXND1-206ENST00000504767 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
PLXND1-206ENST00000504767 KIF21AQ7Z4S6 1674 aa32.91■■■□□ 2.86
PLXND1-206ENST00000504767 FANCD2Q9BXW9 1451 aa32.81■■■□□ 2.84
PLXND1-206ENST00000504767 PRDM2Q13029 1718 aa32.78■■■□□ 2.84
PLXND1-206ENST00000504767 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
PLXND1-206ENST00000504767 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
PLXND1-206ENST00000504767 CUX2O14529 1486 aa32.71■■■□□ 2.83
PLXND1-206ENST00000504767 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
PLXND1-206ENST00000504767 WDR62O43379 1518 aa32.56■■■□□ 2.8
PLXND1-206ENST00000504767 URB2Q14146 1524 aaKnown RBP32.47■■■□□ 2.79
PLXND1-206ENST00000504767 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
PLXND1-206ENST00000504767 TOPBP1Q92547 1522 aa32.31■■■□□ 2.76
PLXND1-206ENST00000504767 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
PLXND1-206ENST00000504767 CUX1P39880 1505 aa32.12■■■□□ 2.73
PLXND1-206ENST00000504767 IFT140Q96RY7 1462 aa32.06■■■□□ 2.72
PLXND1-206ENST00000504767 POLA1P09884 1462 aaPredicted RBP32.04■■■□□ 2.72
PLXND1-206ENST00000504767 WRNQ14191 1432 aaPredicted RBP eCLIP31.99■■■□□ 2.71
PLXND1-206ENST00000504767 FGD5Q6ZNL6 1462 aa31.98■■■□□ 2.71
PLXND1-206ENST00000504767 TARBP1Q13395 1621 aaKnown RBP31.95■■■□□ 2.71
PLXND1-206ENST00000504767 SOGA1O94964 1423 aa31.94■■■□□ 2.7
PLXND1-206ENST00000504767 RAD54L2Q9Y4B4 1467 aa31.91■■■□□ 2.7
PLXND1-206ENST00000504767 ZNF608Q9ULD9 1512 aaPredicted RBP31.91■■■□□ 2.7
PLXND1-206ENST00000504767 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
PLXND1-206ENST00000504767 SYNJ1O43426 1573 aa31.88■■■□□ 2.69
PLXND1-206ENST00000504767 BIVM-ERCC5R4GMW8 1640 aa31.88■■■□□ 2.69
PLXND1-206ENST00000504767 AQRO60306 1485 aaKnown RBP eCLIP31.77■■■□□ 2.682e-8■■■□□ 18.1
PLXND1-206ENST00000504767 EIF4G3O43432 1585 aaKnown RBP31.76■■■□□ 2.67
PLXND1-206ENST00000504767 TDRD9Q8NDG6 1382 aaKnown RBP31.74■■■□□ 2.67
PLXND1-206ENST00000504767 WDR97A6NE52 1622 aa31.7■■■□□ 2.66
PLXND1-206ENST00000504767 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
PLXND1-206ENST00000504767 DNAJC5Q9H3Z4 198 aa31.57■■■□□ 2.64
PLXND1-206ENST00000504767 GAPVD1Q14C86 1478 aa31.56■■■□□ 2.64
PLXND1-206ENST00000504767 ABCA5Q8WWZ7 1642 aa31.54■■■□□ 2.64
PLXND1-206ENST00000504767 GRIN2BQ13224 1484 aa31.52■■■□□ 2.64
PLXND1-206ENST00000504767 PBRM1Q86U86 1689 aa31.45■■■□□ 2.63
PLXND1-206ENST00000504767 SNAPC4Q5SXM2 1469 aa31.45■■■□□ 2.62
PLXND1-206ENST00000504767 OSCARQ8IYS5 282 aa31.43■■■□□ 2.62
PLXND1-206ENST00000504767 MAGI1Q96QZ7 1491 aaPredicted RBP31.42■■■□□ 2.62
PLXND1-206ENST00000504767 TRIM41Q8WV44 630 aa31.38■■■□□ 2.61
PLXND1-206ENST00000504767 FBLN2P98095 1184 aa31.36■■■□□ 2.61
PLXND1-206ENST00000504767 CHD1O14646 1710 aa31.34■■■□□ 2.61
PLXND1-206ENST00000504767 KIF27Q86VH2 1401 aa31.32■■■□□ 2.6
PLXND1-206ENST00000504767 ERICH3Q5RHP9 1530 aa31.31■■■□□ 2.6
PLXND1-206ENST00000504767 CHMP7Q8WUX9 453 aaPredicted RBP31.31■■■□□ 2.6
PLXND1-206ENST00000504767 SYNJ2O15056 1496 aa31.3■■■□□ 2.6
PLXND1-206ENST00000504767 ADAMTS12P58397 1594 aa31.21■■■□□ 2.59
PLXND1-206ENST00000504767 IGF1RP08069 1367 aa31.2■■■□□ 2.59
PLXND1-206ENST00000504767 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.59
PLXND1-206ENST00000504767 GRIN2AQ12879 1464 aa31.12■■■□□ 2.57
PLXND1-206ENST00000504767 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
PLXND1-206ENST00000504767 RUSC2Q8N2Y8 1516 aa31.09■■■□□ 2.57
PLXND1-206ENST00000504767 CUL7Q14999 1698 aa31.04■■■□□ 2.56
PLXND1-206ENST00000504767 CLASP1Q7Z460 1538 aa31.01■■■□□ 2.55
PLXND1-206ENST00000504767 CARMIL1Q5VZK9 1371 aa31■■■□□ 2.55
PLXND1-206ENST00000504767 NUP160Q12769 1436 aa30.98■■■□□ 2.55
PLXND1-206ENST00000504767 CEP170Q5SW79 1584 aa30.96■■■□□ 2.55
PLXND1-206ENST00000504767 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
PLXND1-206ENST00000504767 RIMBP3CA6NJZ7 1639 aa30.85■■■□□ 2.53
PLXND1-206ENST00000504767 RIMBP3BA6NNM3 1639 aa30.85■■■□□ 2.53
PLXND1-206ENST00000504767 RIMBP3Q9UFD9 1639 aa30.85■■■□□ 2.53
PLXND1-206ENST00000504767 RAPGEF2Q9Y4G8 1499 aa30.82■■■□□ 2.52
PLXND1-206ENST00000504767 EEA1Q15075 1411 aa30.81■■■□□ 2.52
PLXND1-206ENST00000504767 CSRNP3Q8WYN3 585 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms