RNA–Protein interactions for RNA: ENST00000504722.5

CNGA1-204, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 4

Gene CNGA1, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-204ENST00000504722 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
CNGA1-204ENST00000504722 NISCHQ9Y2I1 1504 aa14.15□□□□□ -0.14
CNGA1-204ENST00000504722 CHIC1Q5VXU3 224 aa13.74□□□□□ -0.21
CNGA1-204ENST00000504722 ABCC9O60706 1549 aa13.29□□□□□ -0.28
CNGA1-204ENST00000504722 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
CNGA1-204ENST00000504722 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
CNGA1-204ENST00000504722 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
CNGA1-204ENST00000504722 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
CNGA1-204ENST00000504722 SENP3Q9H4L4 574 aaPredicted RBP12.45□□□□□ -0.42
CNGA1-204ENST00000504722 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
CNGA1-204ENST00000504722 NACADO15069 1562 aa12.27□□□□□ -0.44
CNGA1-204ENST00000504722 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
CNGA1-204ENST00000504722 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
CNGA1-204ENST00000504722 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
CNGA1-204ENST00000504722 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
CNGA1-204ENST00000504722 BICRAQ9NZM4 1560 aa12.1□□□□□ -0.47
CNGA1-204ENST00000504722 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
CNGA1-204ENST00000504722 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
CNGA1-204ENST00000504722 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.49
CNGA1-204ENST00000504722 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
CNGA1-204ENST00000504722 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
CNGA1-204ENST00000504722 FOXD1Q16676 465 aa11.72□□□□□ -0.53
CNGA1-204ENST00000504722 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
CNGA1-204ENST00000504722 DCAF1Q9Y4B6 1507 aa11.65□□□□□ -0.54
CNGA1-204ENST00000504722 CUX2O14529 1486 aa11.63□□□□□ -0.55
CNGA1-204ENST00000504722 ZCCHC6Q5VYS8 1495 aaKnown RBP11.62□□□□□ -0.55
CNGA1-204ENST00000504722 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
CNGA1-204ENST00000504722 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
CNGA1-204ENST00000504722 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
CNGA1-204ENST00000504722 NESP48681 1621 aa11.29□□□□□ -0.6
CNGA1-204ENST00000504722 MSH5O43196 834 aa11.25□□□□□ -0.61
CNGA1-204ENST00000504722 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
CNGA1-204ENST00000504722 ATAD2BQ9ULI0 1458 aa11.24□□□□□ -0.61
CNGA1-204ENST00000504722 HMGXB3Q12766 1538 aa11.2□□□□□ -0.62
CNGA1-204ENST00000504722 SMARCA2P51531 1590 aa11.2□□□□□ -0.62
CNGA1-204ENST00000504722 LAMC3Q9Y6N6 1575 aa11.15□□□□□ -0.62
CNGA1-204ENST00000504722 KIF21AQ7Z4S6 1674 aa11.13□□□□□ -0.63
CNGA1-204ENST00000504722 SMARCA4P51532 1647 aa11.12□□□□□ -0.63
CNGA1-204ENST00000504722 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
CNGA1-204ENST00000504722 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
CNGA1-204ENST00000504722 PLPPR3Q6T4P5 718 aa11.08□□□□□ -0.64
CNGA1-204ENST00000504722 BAZ1AQ9NRL2 1556 aaPredicted RBP11.06□□□□□ -0.64
CNGA1-204ENST00000504722 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
CNGA1-204ENST00000504722 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
CNGA1-204ENST00000504722 PEG3Q9GZU2 1588 aa11.01□□□□□ -0.65
CNGA1-204ENST00000504722 WDR62O43379 1518 aa11□□□□□ -0.65
CNGA1-204ENST00000504722 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
CNGA1-204ENST00000504722 RIMBP3CA6NJZ7 1639 aa10.92□□□□□ -0.66
CNGA1-204ENST00000504722 RIMBP3BA6NNM3 1639 aa10.92□□□□□ -0.66
CNGA1-204ENST00000504722 RIMBP3Q9UFD9 1639 aa10.92□□□□□ -0.66
CNGA1-204ENST00000504722 CEP164Q9UPV0 1460 aa10.9□□□□□ -0.66
CNGA1-204ENST00000504722 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.67
CNGA1-204ENST00000504722 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
CNGA1-204ENST00000504722 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
CNGA1-204ENST00000504722 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
CNGA1-204ENST00000504722 CYB5RLQ6IPT4 315 aa10.82□□□□□ -0.68
CNGA1-204ENST00000504722 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
CNGA1-204ENST00000504722 CFTRP13569 1480 aa10.76□□□□□ -0.69
CNGA1-204ENST00000504722 WIZO95785 1651 aa10.74□□□□□ -0.69
CNGA1-204ENST00000504722 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
CNGA1-204ENST00000504722 ZNF608Q9ULD9 1512 aaPredicted RBP10.72□□□□□ -0.69
CNGA1-204ENST00000504722 PPP6R1Q9UPN7 881 aa10.71□□□□□ -0.69
CNGA1-204ENST00000504722 ARAP1Q96P48 1450 aa10.7□□□□□ -0.7
CNGA1-204ENST00000504722 IFT140Q96RY7 1462 aa10.7□□□□□ -0.7
CNGA1-204ENST00000504722 ADRA2BP18089 450 aa10.68□□□□□ -0.7
CNGA1-204ENST00000504722 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
CNGA1-204ENST00000504722 CHD1O14646 1710 aa10.64□□□□□ -0.71
CNGA1-204ENST00000504722 EIF4G3O43432 1585 aaKnown RBP10.63□□□□□ -0.71
CNGA1-204ENST00000504722 FBLN2P98095 1184 aa10.62□□□□□ -0.71
CNGA1-204ENST00000504722 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
CNGA1-204ENST00000504722 TOPBP1Q92547 1522 aa10.59□□□□□ -0.71
CNGA1-204ENST00000504722 AQRO60306 1485 aaKnown RBP eCLIP10.58□□□□□ -0.72
CNGA1-204ENST00000504722 TOP2AP11388 1531 aaKnown RBP10.57□□□□□ -0.72
CNGA1-204ENST00000504722 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
CNGA1-204ENST00000504722 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
CNGA1-204ENST00000504722 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.73
CNGA1-204ENST00000504722 CLASP1Q7Z460 1538 aa10.5□□□□□ -0.73
CNGA1-204ENST00000504722 CHMP7Q8WUX9 453 aaPredicted RBP10.47□□□□□ -0.73
CNGA1-204ENST00000504722 CCDC88BA6NC98 1476 aa10.47□□□□□ -0.73
CNGA1-204ENST00000504722 SYNJ1O43426 1573 aa10.47□□□□□ -0.73
CNGA1-204ENST00000504722 POLA1P09884 1462 aaPredicted RBP10.46□□□□□ -0.74
CNGA1-204ENST00000504722 SNAPC4Q5SXM2 1469 aa10.45□□□□□ -0.74
CNGA1-204ENST00000504722 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
CNGA1-204ENST00000504722 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
CNGA1-204ENST00000504722 RAD54L2Q9Y4B4 1467 aa10.43□□□□□ -0.74
CNGA1-204ENST00000504722 SOGA1O94964 1423 aa10.42□□□□□ -0.74
CNGA1-204ENST00000504722 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
CNGA1-204ENST00000504722 MAGI1Q96QZ7 1491 aaPredicted RBP10.41□□□□□ -0.74
CNGA1-204ENST00000504722 WDR97A6NE52 1622 aa10.4□□□□□ -0.75
CNGA1-204ENST00000504722 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
CNGA1-204ENST00000504722 GRIN2BQ13224 1484 aa10.37□□□□□ -0.75
CNGA1-204ENST00000504722 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
CNGA1-204ENST00000504722 KIF13AQ9H1H9 1805 aa10.32□□□□□ -0.76
CNGA1-204ENST00000504722 ERCC6L2Q5T890 1561 aa10.31□□□□□ -0.76
CNGA1-204ENST00000504722 PBRM1Q86U86 1689 aa10.29□□□□□ -0.76
CNGA1-204ENST00000504722 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
CNGA1-204ENST00000504722 CUX1P39880 1505 aa10.26□□□□□ -0.77
CNGA1-204ENST00000504722 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
CNGA1-204ENST00000504722 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
CNGA1-204ENST00000504722 GRIN2AQ12879 1464 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms