RNA–Protein interactions for RNA: ENST00000504648.5

CDK18-213, Transcript of cyclin dependent kinase 18, humanhuman

TSL 2

Gene CDK18, Length 2,435 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-213ENST00000504648 NISCHQ9Y2I1 1504 aa39.25■■■■□ 3.87
CDK18-213ENST00000504648 CCDC180Q9P1Z9 1646 aa34.51■■■■□ 3.11
CDK18-213ENST00000504648 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
CDK18-213ENST00000504648 DCAF1Q9Y4B6 1507 aa32.66■■■□□ 2.82
CDK18-213ENST00000504648 ABCC9O60706 1549 aa32.51■■■□□ 2.79
CDK18-213ENST00000504648 MYO15BQ96JP2 1530 aa32.43■■■□□ 2.78
CDK18-213ENST00000504648 NACADO15069 1562 aa32.17■■■□□ 2.74
CDK18-213ENST00000504648 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
CDK18-213ENST00000504648 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
CDK18-213ENST00000504648 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
CDK18-213ENST00000504648 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
CDK18-213ENST00000504648 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
CDK18-213ENST00000504648 BICRAQ9NZM4 1560 aa30.87■■■□□ 2.53
CDK18-213ENST00000504648 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.476e-7■■□□□ 12
CDK18-213ENST00000504648 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
CDK18-213ENST00000504648 CECR2Q9BXF3 1484 aa30.36■■■□□ 2.45
CDK18-213ENST00000504648 RSF1Q96T23 1441 aaPredicted RBP30.28■■■□□ 2.44
CDK18-213ENST00000504648 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
CDK18-213ENST00000504648 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
CDK18-213ENST00000504648 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
CDK18-213ENST00000504648 PEG3Q9GZU2 1588 aa30■■■□□ 2.39
CDK18-213ENST00000504648 EIF4G1Q04637 1599 aaKnown RBP29.95■■■□□ 2.39
CDK18-213ENST00000504648 WIZO95785 1651 aa29.92■■■□□ 2.38
CDK18-213ENST00000504648 SMARCA2P51531 1590 aa29.84■■■□□ 2.37
CDK18-213ENST00000504648 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
CDK18-213ENST00000504648 TOP2AP11388 1531 aaKnown RBP29.76■■■□□ 2.35
CDK18-213ENST00000504648 NCAPD3P42695 1498 aa29.65■■■□□ 2.34
CDK18-213ENST00000504648 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
CDK18-213ENST00000504648 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
CDK18-213ENST00000504648 CC2D2AQ9P2K1 1620 aa29.54■■■□□ 2.32
CDK18-213ENST00000504648 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
CDK18-213ENST00000504648 CFTRP13569 1480 aa28.88■■■□□ 2.21
CDK18-213ENST00000504648 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
CDK18-213ENST00000504648 DNAJC5BQ9UF47 199 aa28.83■■■□□ 2.21
CDK18-213ENST00000504648 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
CDK18-213ENST00000504648 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
CDK18-213ENST00000504648 LAMC3Q9Y6N6 1575 aa28.7■■■□□ 2.18
CDK18-213ENST00000504648 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
CDK18-213ENST00000504648 WRNQ14191 1432 aaPredicted RBP eCLIP28.51■■■□□ 2.15
CDK18-213ENST00000504648 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
CDK18-213ENST00000504648 NESP48681 1621 aa28.45■■■□□ 2.14
CDK18-213ENST00000504648 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
CDK18-213ENST00000504648 FANCD2Q9BXW9 1451 aa28.43■■■□□ 2.14
CDK18-213ENST00000504648 BIVM-ERCC5R4GMW8 1640 aa28.39■■■□□ 2.14
CDK18-213ENST00000504648 TOP2BQ02880 1626 aa28.38■■■□□ 2.13
CDK18-213ENST00000504648 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
CDK18-213ENST00000504648 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
CDK18-213ENST00000504648 CUX1P39880 1505 aa28.29■■■□□ 2.12
CDK18-213ENST00000504648 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
CDK18-213ENST00000504648 KIF21AQ7Z4S6 1674 aa28.2■■■□□ 2.1
CDK18-213ENST00000504648 EEA1Q15075 1411 aa28.12■■■□□ 2.09
CDK18-213ENST00000504648 TOPBP1Q92547 1522 aa28.12■■■□□ 2.09
CDK18-213ENST00000504648 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
CDK18-213ENST00000504648 MRC2Q9UBG0 1479 aa28.07■■■□□ 2.08
CDK18-213ENST00000504648 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
CDK18-213ENST00000504648 WDR62O43379 1518 aa27.97■■■□□ 2.07
CDK18-213ENST00000504648 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
CDK18-213ENST00000504648 SOGA1O94964 1423 aa27.94■■■□□ 2.06
CDK18-213ENST00000504648 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
CDK18-213ENST00000504648 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
CDK18-213ENST00000504648 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
CDK18-213ENST00000504648 KIF27Q86VH2 1401 aa27.85■■■□□ 2.05
CDK18-213ENST00000504648 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
CDK18-213ENST00000504648 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
CDK18-213ENST00000504648 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
CDK18-213ENST00000504648 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
CDK18-213ENST00000504648 CUX2O14529 1486 aa27.75■■■□□ 2.03
CDK18-213ENST00000504648 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
CDK18-213ENST00000504648 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
CDK18-213ENST00000504648 IFT140Q96RY7 1462 aa27.71■■■□□ 2.03
CDK18-213ENST00000504648 KIF21BO75037 1637 aa27.71■■■□□ 2.03
CDK18-213ENST00000504648 ABCA5Q8WWZ7 1642 aa27.65■■■□□ 2.02
CDK18-213ENST00000504648 PRXQ9BXM0 1461 aa27.62■■■□□ 2.01
CDK18-213ENST00000504648 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
CDK18-213ENST00000504648 IGF1RP08069 1367 aa27.59■■■□□ 2.01
CDK18-213ENST00000504648 GOLGA3Q08378 1498 aa27.59■■■□□ 2.01
CDK18-213ENST00000504648 LOC105371045A0A1W2PR82 267 aa27.57■■■□□ 2
CDK18-213ENST00000504648 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
CDK18-213ENST00000504648 CUL7Q14999 1698 aa27.52■■■□□ 2
CDK18-213ENST00000504648 TDRD9Q8NDG6 1382 aaKnown RBP27.47■■□□□ 1.99
CDK18-213ENST00000504648 TNIKQ9UKE5 1360 aa27.47■■□□□ 1.99
CDK18-213ENST00000504648 CARMIL1Q5VZK9 1371 aa27.44■■□□□ 1.98
CDK18-213ENST00000504648 RAPGEF2Q9Y4G8 1499 aa27.43■■□□□ 1.98
CDK18-213ENST00000504648 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
CDK18-213ENST00000504648 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
CDK18-213ENST00000504648 ZNF608Q9ULD9 1512 aaPredicted RBP27.39■■□□□ 1.97
CDK18-213ENST00000504648 EIF4G3O43432 1585 aaKnown RBP27.38■■□□□ 1.97
CDK18-213ENST00000504648 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.971e-7■■■□□ 16.7
CDK18-213ENST00000504648 FHAD1B1AJZ9 1412 aa27.3■■□□□ 1.96
CDK18-213ENST00000504648 ADAMTS12P58397 1594 aa27.29■■□□□ 1.96
CDK18-213ENST00000504648 UBTFP17480 764 aaKnown RBP27.28■■□□□ 1.96
CDK18-213ENST00000504648 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.96
CDK18-213ENST00000504648 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
CDK18-213ENST00000504648 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
CDK18-213ENST00000504648 EHMT2Q96KQ7 1210 aa27.17■■□□□ 1.94
CDK18-213ENST00000504648 SYNJ2O15056 1496 aa27.12■■□□□ 1.93
CDK18-213ENST00000504648 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
CDK18-213ENST00000504648 CLIP1P30622 1438 aa27.07■■□□□ 1.92
CDK18-213ENST00000504648 GRIN2AQ12879 1464 aa27.05■■□□□ 1.92
CDK18-213ENST00000504648 EFCAB5A4FU69 1503 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms