RNA–Protein interactions for RNA: ENST00000504501.1

OTUD4-205, Transcript of OTU deubiquitinase 4, humanhuman

TSL 4

Gene OTUD4, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-205ENST00000504501 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
OTUD4-205ENST00000504501 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
OTUD4-205ENST00000504501 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
OTUD4-205ENST00000504501 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
OTUD4-205ENST00000504501 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
OTUD4-205ENST00000504501 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
OTUD4-205ENST00000504501 ABCC9O60706 1549 aa17.25■□□□□ 0.35
OTUD4-205ENST00000504501 RB1CC1Q8TDY2 1594 aa16.4■□□□□ 0.22
OTUD4-205ENST00000504501 NACADO15069 1562 aa16.34■□□□□ 0.21
OTUD4-205ENST00000504501 DCAF8L2P0C7V8 631 aa16.31■□□□□ 0.2
OTUD4-205ENST00000504501 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
OTUD4-205ENST00000504501 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
OTUD4-205ENST00000504501 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
OTUD4-205ENST00000504501 PABPN1Q86U42 306 aaKnown RBP eCLIP16.13■□□□□ 0.17
OTUD4-205ENST00000504501 FOXD1Q16676 465 aa16.12■□□□□ 0.17
OTUD4-205ENST00000504501 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
OTUD4-205ENST00000504501 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
OTUD4-205ENST00000504501 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
OTUD4-205ENST00000504501 DCAF1Q9Y4B6 1507 aa16.02■□□□□ 0.15
OTUD4-205ENST00000504501 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
OTUD4-205ENST00000504501 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
OTUD4-205ENST00000504501 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
OTUD4-205ENST00000504501 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
OTUD4-205ENST00000504501 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
OTUD4-205ENST00000504501 ADRA2BP18089 450 aa15.36■□□□□ 0.05
OTUD4-205ENST00000504501 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
OTUD4-205ENST00000504501 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
OTUD4-205ENST00000504501 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
OTUD4-205ENST00000504501 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
OTUD4-205ENST00000504501 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
OTUD4-205ENST00000504501 MSH5O43196 834 aa15.04■□□□□ -0
OTUD4-205ENST00000504501 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
OTUD4-205ENST00000504501 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
OTUD4-205ENST00000504501 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
OTUD4-205ENST00000504501 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
OTUD4-205ENST00000504501 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
OTUD4-205ENST00000504501 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
OTUD4-205ENST00000504501 NESP48681 1621 aa14.89□□□□□ -0.03
OTUD4-205ENST00000504501 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
OTUD4-205ENST00000504501 WIZO95785 1651 aa14.79□□□□□ -0.04
OTUD4-205ENST00000504501 CUX2O14529 1486 aa14.76□□□□□ -0.05
OTUD4-205ENST00000504501 RSF1Q96T23 1441 aaPredicted RBP14.73□□□□□ -0.05
OTUD4-205ENST00000504501 DNAJC5Q9H3Z4 198 aa14.72□□□□□ -0.05
OTUD4-205ENST00000504501 LAMC3Q9Y6N6 1575 aa14.72□□□□□ -0.05
OTUD4-205ENST00000504501 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
OTUD4-205ENST00000504501 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
OTUD4-205ENST00000504501 KIF21AQ7Z4S6 1674 aa14.64□□□□□ -0.07
OTUD4-205ENST00000504501 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
OTUD4-205ENST00000504501 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
OTUD4-205ENST00000504501 CFTRP13569 1480 aa14.54□□□□□ -0.08
OTUD4-205ENST00000504501 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
OTUD4-205ENST00000504501 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
OTUD4-205ENST00000504501 WDR62O43379 1518 aa14.48□□□□□ -0.09
OTUD4-205ENST00000504501 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
OTUD4-205ENST00000504501 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
OTUD4-205ENST00000504501 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
OTUD4-205ENST00000504501 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
OTUD4-205ENST00000504501 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
OTUD4-205ENST00000504501 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
OTUD4-205ENST00000504501 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
OTUD4-205ENST00000504501 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
OTUD4-205ENST00000504501 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
OTUD4-205ENST00000504501 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
OTUD4-205ENST00000504501 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
OTUD4-205ENST00000504501 PPP4R3CPQ6ZMV5 832 aa14.14□□□□□ -0.15
OTUD4-205ENST00000504501 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
OTUD4-205ENST00000504501 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
OTUD4-205ENST00000504501 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
OTUD4-205ENST00000504501 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■■□□ 14.6
OTUD4-205ENST00000504501 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
OTUD4-205ENST00000504501 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
OTUD4-205ENST00000504501 CUX1P39880 1505 aa14.06□□□□□ -0.16
OTUD4-205ENST00000504501 TRIM41Q8WV44 630 aa14.06□□□□□ -0.16
OTUD4-205ENST00000504501 SOGA1O94964 1423 aa14.04□□□□□ -0.16
OTUD4-205ENST00000504501 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
OTUD4-205ENST00000504501 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
OTUD4-205ENST00000504501 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
OTUD4-205ENST00000504501 CHD1O14646 1710 aa13.94□□□□□ -0.18
OTUD4-205ENST00000504501 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
OTUD4-205ENST00000504501 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
OTUD4-205ENST00000504501 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
OTUD4-205ENST00000504501 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
OTUD4-205ENST00000504501 ARHGEF11O15085 1522 aa13.92□□□□□ -0.18
OTUD4-205ENST00000504501 FBLN2P98095 1184 aa13.91□□□□□ -0.18
OTUD4-205ENST00000504501 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
OTUD4-205ENST00000504501 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
OTUD4-205ENST00000504501 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
OTUD4-205ENST00000504501 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
OTUD4-205ENST00000504501 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
OTUD4-205ENST00000504501 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
OTUD4-205ENST00000504501 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
OTUD4-205ENST00000504501 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
OTUD4-205ENST00000504501 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
OTUD4-205ENST00000504501 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
OTUD4-205ENST00000504501 CHMP7Q8WUX9 453 aaPredicted RBP13.83□□□□□ -0.2
OTUD4-205ENST00000504501 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
OTUD4-205ENST00000504501 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
OTUD4-205ENST00000504501 CLASP1Q7Z460 1538 aa13.82□□□□□ -0.2
OTUD4-205ENST00000504501 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
OTUD4-205ENST00000504501 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms