RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
COL1A1-210ENST00000504289 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
COL1A1-210ENST00000504289 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
COL1A1-210ENST00000504289 DCAF1Q9Y4B6 1507 aa17.94■□□□□ 0.46
COL1A1-210ENST00000504289 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
COL1A1-210ENST00000504289 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
COL1A1-210ENST00000504289 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
COL1A1-210ENST00000504289 NACADO15069 1562 aa17.36■□□□□ 0.37
COL1A1-210ENST00000504289 ABCC9O60706 1549 aa17.29■□□□□ 0.36
COL1A1-210ENST00000504289 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
COL1A1-210ENST00000504289 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.32
COL1A1-210ENST00000504289 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
COL1A1-210ENST00000504289 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
COL1A1-210ENST00000504289 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
COL1A1-210ENST00000504289 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
COL1A1-210ENST00000504289 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
COL1A1-210ENST00000504289 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
COL1A1-210ENST00000504289 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
COL1A1-210ENST00000504289 MROH2BQ7Z745 1585 aa16.57■□□□□ 0.24
COL1A1-210ENST00000504289 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
COL1A1-210ENST00000504289 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
COL1A1-210ENST00000504289 WIZO95785 1651 aa16.41■□□□□ 0.22
COL1A1-210ENST00000504289 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
COL1A1-210ENST00000504289 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
COL1A1-210ENST00000504289 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL1A1-210ENST00000504289 SMARCA2P51531 1590 aa16.2■□□□□ 0.18
COL1A1-210ENST00000504289 EIF4G1Q04637 1599 aaKnown RBP16.16■□□□□ 0.18
COL1A1-210ENST00000504289 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
COL1A1-210ENST00000504289 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
COL1A1-210ENST00000504289 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
COL1A1-210ENST00000504289 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
COL1A1-210ENST00000504289 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
COL1A1-210ENST00000504289 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
COL1A1-210ENST00000504289 EEA1Q15075 1411 aa15.86■□□□□ 0.13
COL1A1-210ENST00000504289 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
COL1A1-210ENST00000504289 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
COL1A1-210ENST00000504289 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
COL1A1-210ENST00000504289 CFTRP13569 1480 aa15.71■□□□□ 0.11
COL1A1-210ENST00000504289 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
COL1A1-210ENST00000504289 TOP2BQ02880 1626 aa15.66■□□□□ 0.1
COL1A1-210ENST00000504289 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
COL1A1-210ENST00000504289 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
COL1A1-210ENST00000504289 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
COL1A1-210ENST00000504289 BIVM-ERCC5R4GMW8 1640 aa15.64■□□□□ 0.09
COL1A1-210ENST00000504289 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
COL1A1-210ENST00000504289 SOGA1O94964 1423 aa15.61■□□□□ 0.09
COL1A1-210ENST00000504289 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
COL1A1-210ENST00000504289 TNIKQ9UKE5 1360 aa15.59■□□□□ 0.09
COL1A1-210ENST00000504289 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
COL1A1-210ENST00000504289 KIF21BO75037 1637 aa15.54■□□□□ 0.08
COL1A1-210ENST00000504289 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
COL1A1-210ENST00000504289 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-210ENST00000504289 CUX1P39880 1505 aa15.49■□□□□ 0.07
COL1A1-210ENST00000504289 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
COL1A1-210ENST00000504289 PCGF6Q9BYE7 350 aa15.45■□□□□ 0.06
COL1A1-210ENST00000504289 CEP162Q5TB80 1403 aa15.44■□□□□ 0.06
COL1A1-210ENST00000504289 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
COL1A1-210ENST00000504289 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
COL1A1-210ENST00000504289 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
COL1A1-210ENST00000504289 UBTFP17480 764 aaKnown RBP15.39■□□□□ 0.05
COL1A1-210ENST00000504289 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
COL1A1-210ENST00000504289 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
COL1A1-210ENST00000504289 DNAJC5Q9H3Z4 198 aa15.37■□□□□ 0.05
COL1A1-210ENST00000504289 HRCP23327 699 aa15.34■□□□□ 0.05
COL1A1-210ENST00000504289 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.04
COL1A1-210ENST00000504289 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
COL1A1-210ENST00000504289 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
COL1A1-210ENST00000504289 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
COL1A1-210ENST00000504289 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
COL1A1-210ENST00000504289 CLIP1P30622 1438 aa15.28■□□□□ 0.04
COL1A1-210ENST00000504289 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
COL1A1-210ENST00000504289 CUX2O14529 1486 aa15.24■□□□□ 0.03
COL1A1-210ENST00000504289 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
COL1A1-210ENST00000504289 IGF1RP08069 1367 aa15.23■□□□□ 0.03
COL1A1-210ENST00000504289 NESP48681 1621 aa15.21■□□□□ 0.03
COL1A1-210ENST00000504289 VPS8Q8N3P4 1428 aa15.21■□□□□ 0.03
COL1A1-210ENST00000504289 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-210ENST00000504289 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-210ENST00000504289 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
COL1A1-210ENST00000504289 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
COL1A1-210ENST00000504289 CUL7Q14999 1698 aa15.11■□□□□ 0.01
COL1A1-210ENST00000504289 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
COL1A1-210ENST00000504289 APLP2Q06481 763 aa15.07■□□□□ 0
COL1A1-210ENST00000504289 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
COL1A1-210ENST00000504289 ARAP1Q96P48 1450 aa15.06■□□□□ 0
COL1A1-210ENST00000504289 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
COL1A1-210ENST00000504289 MRC2Q9UBG0 1479 aa15.04■□□□□ -0
COL1A1-210ENST00000504289 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
COL1A1-210ENST00000504289 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
COL1A1-210ENST00000504289 MAP3K1Q13233 1512 aa15□□□□□ -0.01
COL1A1-210ENST00000504289 GAPVD1Q14C86 1478 aa15□□□□□ -0.01
COL1A1-210ENST00000504289 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
COL1A1-210ENST00000504289 EFCAB5A4FU69 1503 aa14.98□□□□□ -0.01
COL1A1-210ENST00000504289 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
COL1A1-210ENST00000504289 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
COL1A1-210ENST00000504289 WDR62O43379 1518 aa14.95□□□□□ -0.02
COL1A1-210ENST00000504289 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
COL1A1-210ENST00000504289 TDRD9Q8NDG6 1382 aaKnown RBP14.92□□□□□ -0.02
COL1A1-210ENST00000504289 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
COL1A1-210ENST00000504289 AQRO60306 1485 aaKnown RBP eCLIP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms