RNA–Protein interactions for RNA: ENST00000504238.5

ABLIM3-205, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 1 (best) BASIC

Gene ABLIM3, Length 2,774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-205ENST00000504238 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
ABLIM3-205ENST00000504238 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
ABLIM3-205ENST00000504238 ABCC9O60706 1549 aa20.56■□□□□ 0.88
ABLIM3-205ENST00000504238 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
ABLIM3-205ENST00000504238 NACADO15069 1562 aa19.43■□□□□ 0.7
ABLIM3-205ENST00000504238 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
ABLIM3-205ENST00000504238 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
ABLIM3-205ENST00000504238 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
ABLIM3-205ENST00000504238 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
ABLIM3-205ENST00000504238 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
ABLIM3-205ENST00000504238 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
ABLIM3-205ENST00000504238 BICRAQ9NZM4 1560 aa19.04■□□□□ 0.64
ABLIM3-205ENST00000504238 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
ABLIM3-205ENST00000504238 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
ABLIM3-205ENST00000504238 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
ABLIM3-205ENST00000504238 CC2D2AQ9P2K1 1620 aa18.57■□□□□ 0.56
ABLIM3-205ENST00000504238 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
ABLIM3-205ENST00000504238 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
ABLIM3-205ENST00000504238 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
ABLIM3-205ENST00000504238 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
ABLIM3-205ENST00000504238 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
ABLIM3-205ENST00000504238 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
ABLIM3-205ENST00000504238 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
ABLIM3-205ENST00000504238 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
ABLIM3-205ENST00000504238 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.43
ABLIM3-205ENST00000504238 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
ABLIM3-205ENST00000504238 PEG3Q9GZU2 1588 aa17.75■□□□□ 0.43
ABLIM3-205ENST00000504238 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
ABLIM3-205ENST00000504238 NESP48681 1621 aa17.71■□□□□ 0.43
ABLIM3-205ENST00000504238 CUX2O14529 1486 aa17.61■□□□□ 0.41
ABLIM3-205ENST00000504238 WIZO95785 1651 aa17.58■□□□□ 0.41
ABLIM3-205ENST00000504238 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
ABLIM3-205ENST00000504238 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
ABLIM3-205ENST00000504238 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
ABLIM3-205ENST00000504238 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
ABLIM3-205ENST00000504238 RSF1Q96T23 1441 aaPredicted RBP17.41■□□□□ 0.38
ABLIM3-205ENST00000504238 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
ABLIM3-205ENST00000504238 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
ABLIM3-205ENST00000504238 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
ABLIM3-205ENST00000504238 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
ABLIM3-205ENST00000504238 WDR62O43379 1518 aa17.25■□□□□ 0.35
ABLIM3-205ENST00000504238 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
ABLIM3-205ENST00000504238 CFTRP13569 1480 aa17.23■□□□□ 0.35
ABLIM3-205ENST00000504238 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
ABLIM3-205ENST00000504238 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
ABLIM3-205ENST00000504238 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
ABLIM3-205ENST00000504238 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
ABLIM3-205ENST00000504238 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
ABLIM3-205ENST00000504238 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
ABLIM3-205ENST00000504238 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
ABLIM3-205ENST00000504238 IFT140Q96RY7 1462 aa16.87■□□□□ 0.29
ABLIM3-205ENST00000504238 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
ABLIM3-205ENST00000504238 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
ABLIM3-205ENST00000504238 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
ABLIM3-205ENST00000504238 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
ABLIM3-205ENST00000504238 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
ABLIM3-205ENST00000504238 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
ABLIM3-205ENST00000504238 HRCP23327 699 aa16.77■□□□□ 0.28
ABLIM3-205ENST00000504238 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
ABLIM3-205ENST00000504238 SLC24A1O60721 1099 aa16.75■□□□□ 0.27
ABLIM3-205ENST00000504238 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
ABLIM3-205ENST00000504238 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
ABLIM3-205ENST00000504238 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
ABLIM3-205ENST00000504238 CUX1P39880 1505 aa16.69■□□□□ 0.26
ABLIM3-205ENST00000504238 CHD1O14646 1710 aa16.68■□□□□ 0.26
ABLIM3-205ENST00000504238 FGD5Q6ZNL6 1462 aa16.68■□□□□ 0.26
ABLIM3-205ENST00000504238 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
ABLIM3-205ENST00000504238 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
ABLIM3-205ENST00000504238 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
ABLIM3-205ENST00000504238 SOGA1O94964 1423 aa16.65■□□□□ 0.26
ABLIM3-205ENST00000504238 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
ABLIM3-205ENST00000504238 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
ABLIM3-205ENST00000504238 FBLN2P98095 1184 aa16.58■□□□□ 0.25
ABLIM3-205ENST00000504238 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
ABLIM3-205ENST00000504238 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
ABLIM3-205ENST00000504238 MYT1Q01538 1121 aa16.53■□□□□ 0.24
ABLIM3-205ENST00000504238 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
ABLIM3-205ENST00000504238 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
ABLIM3-205ENST00000504238 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
ABLIM3-205ENST00000504238 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
ABLIM3-205ENST00000504238 ABCA10Q8WWZ4 1543 aa16.46■□□□□ 0.23
ABLIM3-205ENST00000504238 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
ABLIM3-205ENST00000504238 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
ABLIM3-205ENST00000504238 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.22
ABLIM3-205ENST00000504238 SYNJ1O43426 1573 aa16.45■□□□□ 0.22
ABLIM3-205ENST00000504238 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
ABLIM3-205ENST00000504238 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
ABLIM3-205ENST00000504238 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
ABLIM3-205ENST00000504238 BIVM-ERCC5R4GMW8 1640 aa16.44■□□□□ 0.22
ABLIM3-205ENST00000504238 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
ABLIM3-205ENST00000504238 WRNQ14191 1432 aaPredicted RBP eCLIP16.41■□□□□ 0.22
ABLIM3-205ENST00000504238 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
ABLIM3-205ENST00000504238 GRIN2AQ12879 1464 aa16.31■□□□□ 0.2
ABLIM3-205ENST00000504238 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
ABLIM3-205ENST00000504238 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
ABLIM3-205ENST00000504238 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
ABLIM3-205ENST00000504238 FHAD1B1AJZ9 1412 aa16.24■□□□□ 0.19
ABLIM3-205ENST00000504238 NUP160Q12769 1436 aa16.24■□□□□ 0.19
ABLIM3-205ENST00000504238 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
ABLIM3-205ENST00000504238 PRKCSHP14314 528 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms