RNA–Protein interactions for RNA: ENST00000504086.1

ITGA1-202, Transcript of integrin subunit alpha 1, humanhuman

TSL 2

Gene ITGA1, Length 1,366 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-202ENST00000504086 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
ITGA1-202ENST00000504086 CCDC180Q9P1Z9 1646 aa37.47■■■■□ 3.59
ITGA1-202ENST00000504086 ABCC9O60706 1549 aa36.62■■■■□ 3.45
ITGA1-202ENST00000504086 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
ITGA1-202ENST00000504086 ZCCHC6Q5VYS8 1495 aaKnown RBP35.26■■■■□ 3.24
ITGA1-202ENST00000504086 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
ITGA1-202ENST00000504086 NACADO15069 1562 aa35.21■■■■□ 3.23
ITGA1-202ENST00000504086 MYO15BQ96JP2 1530 aa35■■■■□ 3.19
ITGA1-202ENST00000504086 DCAF1Q9Y4B6 1507 aa34.93■■■■□ 3.18
ITGA1-202ENST00000504086 UNC13AQ9UPW8 1703 aa34.37■■■■□ 3.09
ITGA1-202ENST00000504086 SCRIBQ14160 1630 aa34.33■■■■□ 3.09
ITGA1-202ENST00000504086 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.08
ITGA1-202ENST00000504086 BICRAQ9NZM4 1560 aa34.11■■■■□ 3.05
ITGA1-202ENST00000504086 SHROOM4Q9ULL8 1493 aa33.76■■■■□ 3
ITGA1-202ENST00000504086 DNAJC5BQ9UF47 199 aa33.38■■■□□ 2.93
ITGA1-202ENST00000504086 EIF4G1Q04637 1599 aaKnown RBP33.25■■■□□ 2.91
ITGA1-202ENST00000504086 CC2D2AQ9P2K1 1620 aa33.07■■■□□ 2.89
ITGA1-202ENST00000504086 CECR2Q9BXF3 1484 aa32.94■■■□□ 2.86
ITGA1-202ENST00000504086 BAZ1AQ9NRL2 1556 aaPredicted RBP32.78■■■□□ 2.84
ITGA1-202ENST00000504086 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
ITGA1-202ENST00000504086 MROH2BQ7Z745 1585 aa32.61■■■□□ 2.81
ITGA1-202ENST00000504086 ATAD2BQ9ULI0 1458 aa32.56■■■□□ 2.8
ITGA1-202ENST00000504086 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
ITGA1-202ENST00000504086 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
ITGA1-202ENST00000504086 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
ITGA1-202ENST00000504086 HMGXB3Q12766 1538 aa32.35■■■□□ 2.77
ITGA1-202ENST00000504086 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
ITGA1-202ENST00000504086 RSF1Q96T23 1441 aaPredicted RBP32.3■■■□□ 2.76
ITGA1-202ENST00000504086 WIZO95785 1651 aa32.27■■■□□ 2.76
ITGA1-202ENST00000504086 TOP2AP11388 1531 aaKnown RBP31.94■■■□□ 2.7
ITGA1-202ENST00000504086 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
ITGA1-202ENST00000504086 NESP48681 1621 aa31.71■■■□□ 2.67
ITGA1-202ENST00000504086 LAMC3Q9Y6N6 1575 aa31.62■■■□□ 2.65
ITGA1-202ENST00000504086 ERCC6Q03468 1493 aa31.6■■■□□ 2.65
ITGA1-202ENST00000504086 CADPSQ9ULU8 1353 aa31.59■■■□□ 2.65
ITGA1-202ENST00000504086 CCDC88BA6NC98 1476 aa31.57■■■□□ 2.64
ITGA1-202ENST00000504086 AEBP2Q6ZN18 517 aaPredicted RBP31.55■■■□□ 2.64
ITGA1-202ENST00000504086 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
ITGA1-202ENST00000504086 CFTRP13569 1480 aa31.41■■■□□ 2.62
ITGA1-202ENST00000504086 KIF21AQ7Z4S6 1674 aa31.31■■■□□ 2.6
ITGA1-202ENST00000504086 FANCD2Q9BXW9 1451 aa31.26■■■□□ 2.59
ITGA1-202ENST00000504086 CEP164Q9UPV0 1460 aa31.21■■■□□ 2.59
ITGA1-202ENST00000504086 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
ITGA1-202ENST00000504086 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
ITGA1-202ENST00000504086 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
ITGA1-202ENST00000504086 CUX2O14529 1486 aa31.09■■■□□ 2.57
ITGA1-202ENST00000504086 WDR62O43379 1518 aa30.96■■■□□ 2.55
ITGA1-202ENST00000504086 URB2Q14146 1524 aaKnown RBP30.9■■■□□ 2.54
ITGA1-202ENST00000504086 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
ITGA1-202ENST00000504086 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
ITGA1-202ENST00000504086 DNMBPQ6XZF7 1577 aa30.73■■■□□ 2.51
ITGA1-202ENST00000504086 CUX1P39880 1505 aa30.58■■■□□ 2.49
ITGA1-202ENST00000504086 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
ITGA1-202ENST00000504086 POLA1P09884 1462 aaPredicted RBP30.51■■■□□ 2.47
ITGA1-202ENST00000504086 WRNQ14191 1432 aaPredicted RBP eCLIP30.5■■■□□ 2.47
ITGA1-202ENST00000504086 FGD5Q6ZNL6 1462 aa30.48■■■□□ 2.47
ITGA1-202ENST00000504086 SOGA1O94964 1423 aa30.42■■■□□ 2.46
ITGA1-202ENST00000504086 RAD54L2Q9Y4B4 1467 aa30.4■■■□□ 2.46
ITGA1-202ENST00000504086 ZNF608Q9ULD9 1512 aaPredicted RBP30.37■■■□□ 2.45
ITGA1-202ENST00000504086 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
ITGA1-202ENST00000504086 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
ITGA1-202ENST00000504086 TOP2BQ02880 1626 aa30.35■■■□□ 2.45
ITGA1-202ENST00000504086 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
ITGA1-202ENST00000504086 EIF4G3O43432 1585 aaKnown RBP30.26■■■□□ 2.43
ITGA1-202ENST00000504086 AQRO60306 1485 aaKnown RBP eCLIP30.25■■■□□ 2.43
ITGA1-202ENST00000504086 TDRD9Q8NDG6 1382 aaKnown RBP30.24■■■□□ 2.43
ITGA1-202ENST00000504086 CHIC1Q5VXU3 224 aa30.19■■■□□ 2.42
ITGA1-202ENST00000504086 ABCA10Q8WWZ4 1543 aa30.16■■■□□ 2.42
ITGA1-202ENST00000504086 WDR97A6NE52 1622 aa30.14■■■□□ 2.41
ITGA1-202ENST00000504086 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
ITGA1-202ENST00000504086 GRIN2BQ13224 1484 aa30.03■■■□□ 2.4
ITGA1-202ENST00000504086 ABCA5Q8WWZ7 1642 aa30■■■□□ 2.39
ITGA1-202ENST00000504086 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
ITGA1-202ENST00000504086 FBLN2P98095 1184 aa29.96■■■□□ 2.39
ITGA1-202ENST00000504086 TRIM41Q8WV44 630 aa29.96■■■□□ 2.39
ITGA1-202ENST00000504086 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
ITGA1-202ENST00000504086 DNAJC5Q9H3Z4 198 aa29.93■■■□□ 2.38
ITGA1-202ENST00000504086 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
ITGA1-202ENST00000504086 OSCARQ8IYS5 282 aa29.89■■■□□ 2.37
ITGA1-202ENST00000504086 CHMP7Q8WUX9 453 aaPredicted RBP29.85■■■□□ 2.37
ITGA1-202ENST00000504086 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
ITGA1-202ENST00000504086 CHD1O14646 1710 aa29.83■■■□□ 2.37
ITGA1-202ENST00000504086 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
ITGA1-202ENST00000504086 ERICH3Q5RHP9 1530 aa29.8■■■□□ 2.36
ITGA1-202ENST00000504086 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
ITGA1-202ENST00000504086 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
ITGA1-202ENST00000504086 IGF1RP08069 1367 aa29.66■■■□□ 2.34
ITGA1-202ENST00000504086 GRIN2AQ12879 1464 aa29.63■■■□□ 2.33
ITGA1-202ENST00000504086 RUSC2Q8N2Y8 1516 aa29.61■■■□□ 2.33
ITGA1-202ENST00000504086 CUL7Q14999 1698 aa29.57■■■□□ 2.32
ITGA1-202ENST00000504086 CARMIL1Q5VZK9 1371 aa29.53■■■□□ 2.32
ITGA1-202ENST00000504086 CLASP1Q7Z460 1538 aa29.48■■■□□ 2.31
ITGA1-202ENST00000504086 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
ITGA1-202ENST00000504086 NUP160Q12769 1436 aa29.46■■■□□ 2.31
ITGA1-202ENST00000504086 FAM9AQ8IZU1 332 aaPredicted RBP29.39■■■□□ 2.3
ITGA1-202ENST00000504086 ARHGEF11O15085 1522 aa29.37■■■□□ 2.29
ITGA1-202ENST00000504086 EEA1Q15075 1411 aa29.37■■■□□ 2.29
ITGA1-202ENST00000504086 RAPGEF2Q9Y4G8 1499 aa29.37■■■□□ 2.29
ITGA1-202ENST00000504086 RIMBP3CA6NJZ7 1639 aa29.35■■■□□ 2.29
ITGA1-202ENST00000504086 RIMBP3BA6NNM3 1639 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms