RNA–Protein interactions for RNA: ENST00000503934.5

CCHCR1-218, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-218ENST00000503934 NISCHQ9Y2I1 1504 aa45.52■■■■■ 4.88
CCHCR1-218ENST00000503934 CCDC180Q9P1Z9 1646 aa40.1■■■■■ 4.01
CCHCR1-218ENST00000503934 ABCC9O60706 1549 aa38.61■■■■□ 3.77
CCHCR1-218ENST00000503934 ZCCHC6Q5VYS8 1495 aaKnown RBP38.04■■■■□ 3.68
CCHCR1-218ENST00000503934 DCAF8L2P0C7V8 631 aa37.83■■■■□ 3.65
CCHCR1-218ENST00000503934 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
CCHCR1-218ENST00000503934 MYO15BQ96JP2 1530 aa37.66■■■■□ 3.62
CCHCR1-218ENST00000503934 NACADO15069 1562 aa37.62■■■■□ 3.61
CCHCR1-218ENST00000503934 RB1CC1Q8TDY2 1594 aa37.46■■■■□ 3.59
CCHCR1-218ENST00000503934 SCRIBQ14160 1630 aa36.62■■■■□ 3.45
CCHCR1-218ENST00000503934 UNC13AQ9UPW8 1703 aa36.46■■■■□ 3.43
CCHCR1-218ENST00000503934 SHROOM4Q9ULL8 1493 aa36.36■■■■□ 3.41
CCHCR1-218ENST00000503934 BICRAQ9NZM4 1560 aa36.25■■■■□ 3.39
CCHCR1-218ENST00000503934 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.39
CCHCR1-218ENST00000503934 CECR2Q9BXF3 1484 aa35.36■■■■□ 3.25
CCHCR1-218ENST00000503934 EIF4G1Q04637 1599 aaKnown RBP35.26■■■■□ 3.24
CCHCR1-218ENST00000503934 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
CCHCR1-218ENST00000503934 SMARCA4P51532 1647 aa35.13■■■■□ 3.21
CCHCR1-218ENST00000503934 MROH2BQ7Z745 1585 aa35.07■■■■□ 3.2
CCHCR1-218ENST00000503934 RSF1Q96T23 1441 aaPredicted RBP34.97■■■■□ 3.19
CCHCR1-218ENST00000503934 CC2D2AQ9P2K1 1620 aa34.93■■■■□ 3.18
CCHCR1-218ENST00000503934 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
CCHCR1-218ENST00000503934 ATAD2BQ9ULI0 1458 aa34.82■■■■□ 3.16
CCHCR1-218ENST00000503934 SMARCA2P51531 1590 aa34.82■■■■□ 3.16
CCHCR1-218ENST00000503934 PEG3Q9GZU2 1588 aa34.81■■■■□ 3.16
CCHCR1-218ENST00000503934 NCAPD3P42695 1498 aa34.74■■■■□ 3.15
CCHCR1-218ENST00000503934 WIZO95785 1651 aa34.68■■■■□ 3.14
CCHCR1-218ENST00000503934 SUPT5HO00267 1087 aaKnown RBP34.64■■■■□ 3.14
CCHCR1-218ENST00000503934 HMGXB3Q12766 1538 aa34.57■■■■□ 3.12
CCHCR1-218ENST00000503934 BAZ1BQ9UIG0 1483 aaKnown RBP34.56■■■■□ 3.12
CCHCR1-218ENST00000503934 TOP2AP11388 1531 aaKnown RBP34.4■■■■□ 3.1
CCHCR1-218ENST00000503934 CCDC88BA6NC98 1476 aa34.03■■■■□ 3.04
CCHCR1-218ENST00000503934 CADPSQ9ULU8 1353 aa33.78■■■■□ 3
CCHCR1-218ENST00000503934 CFTRP13569 1480 aa33.69■■■□□ 2.98
CCHCR1-218ENST00000503934 LAMC3Q9Y6N6 1575 aa33.66■■■□□ 2.98
CCHCR1-218ENST00000503934 NESP48681 1621 aa33.59■■■□□ 2.97
CCHCR1-218ENST00000503934 PDS5BQ9NTI5 1447 aa33.48■■■□□ 2.95
CCHCR1-218ENST00000503934 FANCD2Q9BXW9 1451 aa33.33■■■□□ 2.93
CCHCR1-218ENST00000503934 PRDM2Q13029 1718 aa33.33■■■□□ 2.93
CCHCR1-218ENST00000503934 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
CCHCR1-218ENST00000503934 CEP164Q9UPV0 1460 aa33.22■■■□□ 2.91
CCHCR1-218ENST00000503934 KIF21AQ7Z4S6 1674 aa33.14■■■□□ 2.9
CCHCR1-218ENST00000503934 MRC2Q9UBG0 1479 aa33.03■■■□□ 2.88
CCHCR1-218ENST00000503934 ABCC8Q09428 1581 aa32.99■■■□□ 2.87
CCHCR1-218ENST00000503934 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
CCHCR1-218ENST00000503934 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
CCHCR1-218ENST00000503934 THOC2Q8NI27 1593 aaKnown RBP32.89■■■□□ 2.86
CCHCR1-218ENST00000503934 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
CCHCR1-218ENST00000503934 WDR62O43379 1518 aa32.87■■■□□ 2.85
CCHCR1-218ENST00000503934 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
CCHCR1-218ENST00000503934 CUX1P39880 1505 aa32.85■■■□□ 2.85
CCHCR1-218ENST00000503934 CHIC1Q5VXU3 224 aa32.77■■■□□ 2.84
CCHCR1-218ENST00000503934 TOP2BQ02880 1626 aa32.77■■■□□ 2.84
CCHCR1-218ENST00000503934 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
CCHCR1-218ENST00000503934 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
CCHCR1-218ENST00000503934 BIVM-ERCC5R4GMW8 1640 aa32.72■■■□□ 2.83
CCHCR1-218ENST00000503934 CUX2O14529 1486 aa32.67■■■□□ 2.82
CCHCR1-218ENST00000503934 FGD5Q6ZNL6 1462 aa32.65■■■□□ 2.82
CCHCR1-218ENST00000503934 POLA1P09884 1462 aaPredicted RBP32.63■■■□□ 2.81
CCHCR1-218ENST00000503934 SOGA1O94964 1423 aa32.58■■■□□ 2.81
CCHCR1-218ENST00000503934 IFT140Q96RY7 1462 aa32.53■■■□□ 2.8
CCHCR1-218ENST00000503934 RAD54L2Q9Y4B4 1467 aa32.48■■■□□ 2.79
CCHCR1-218ENST00000503934 TARBP1Q13395 1621 aaKnown RBP32.41■■■□□ 2.78
CCHCR1-218ENST00000503934 ABCA10Q8WWZ4 1543 aa32.4■■■□□ 2.78
CCHCR1-218ENST00000503934 TDRD9Q8NDG6 1382 aaKnown RBP32.28■■■□□ 2.76
CCHCR1-218ENST00000503934 ZNF608Q9ULD9 1512 aaPredicted RBP32.26■■■□□ 2.75
CCHCR1-218ENST00000503934 WDR97A6NE52 1622 aa32.25■■■□□ 2.75
CCHCR1-218ENST00000503934 KIF27Q86VH2 1401 aa32.25■■■□□ 2.75
CCHCR1-218ENST00000503934 AQRO60306 1485 aaKnown RBP eCLIP32.21■■■□□ 2.752e-10■■■■■ 47.9
CCHCR1-218ENST00000503934 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
CCHCR1-218ENST00000503934 ABCA5Q8WWZ7 1642 aa32.13■■■□□ 2.73
CCHCR1-218ENST00000503934 EEA1Q15075 1411 aa32.12■■■□□ 2.73
CCHCR1-218ENST00000503934 EIF4G3O43432 1585 aaKnown RBP32.11■■■□□ 2.73
CCHCR1-218ENST00000503934 GRIN2BQ13224 1484 aa32.09■■■□□ 2.73
CCHCR1-218ENST00000503934 RUSC2Q8N2Y8 1516 aa32.08■■■□□ 2.73
CCHCR1-218ENST00000503934 IGF1RP08069 1367 aa32.04■■■□□ 2.72
CCHCR1-218ENST00000503934 ERICH3Q5RHP9 1530 aa32.02■■■□□ 2.72
CCHCR1-218ENST00000503934 CSRNP3Q8WYN3 585 aa32■■■□□ 2.71
CCHCR1-218ENST00000503934 FAM9AQ8IZU1 332 aaPredicted RBP31.98■■■□□ 2.71
CCHCR1-218ENST00000503934 PBRM1Q86U86 1689 aa31.93■■■□□ 2.7
CCHCR1-218ENST00000503934 MAGI1Q96QZ7 1491 aaPredicted RBP31.92■■■□□ 2.7
CCHCR1-218ENST00000503934 SNAPC4Q5SXM2 1469 aa31.89■■■□□ 2.7
CCHCR1-218ENST00000503934 CARMIL1Q5VZK9 1371 aa31.86■■■□□ 2.69
CCHCR1-218ENST00000503934 FHAD1B1AJZ9 1412 aa31.85■■■□□ 2.69
CCHCR1-218ENST00000503934 CUL7Q14999 1698 aa31.82■■■□□ 2.68
CCHCR1-218ENST00000503934 CHMP7Q8WUX9 453 aaPredicted RBP31.79■■■□□ 2.68
CCHCR1-218ENST00000503934 SYNJ2O15056 1496 aa31.78■■■□□ 2.68
CCHCR1-218ENST00000503934 PRXQ9BXM0 1461 aa31.78■■■□□ 2.68
CCHCR1-218ENST00000503934 ADAMTS12P58397 1594 aa31.77■■■□□ 2.68
CCHCR1-218ENST00000503934 FBLN2P98095 1184 aa31.74■■■□□ 2.67
CCHCR1-218ENST00000503934 RAPGEF2Q9Y4G8 1499 aa31.72■■■□□ 2.67
CCHCR1-218ENST00000503934 GRIN2AQ12879 1464 aa31.65■■■□□ 2.66
CCHCR1-218ENST00000503934 KIF21BO75037 1637 aa31.63■■■□□ 2.65
CCHCR1-218ENST00000503934 GOLGA3Q08378 1498 aa31.54■■■□□ 2.64
CCHCR1-218ENST00000503934 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
CCHCR1-218ENST00000503934 CHD1O14646 1710 aa31.54■■■□□ 2.64
CCHCR1-218ENST00000503934 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
CCHCR1-218ENST00000503934 NUP160Q12769 1436 aa31.49■■■□□ 2.63
CCHCR1-218ENST00000503934 UBTFP17480 764 aaKnown RBP31.47■■■□□ 2.63
CCHCR1-218ENST00000503934 EHMT2Q96KQ7 1210 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms