RNA–Protein interactions for RNA: ENST00000503670.5

DDR1-251, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-251ENST00000503670 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
DDR1-251ENST00000503670 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.62
DDR1-251ENST00000503670 ABCC9O60706 1549 aa18.24■□□□□ 0.51
DDR1-251ENST00000503670 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
DDR1-251ENST00000503670 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
DDR1-251ENST00000503670 NACADO15069 1562 aa17.7■□□□□ 0.42
DDR1-251ENST00000503670 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
DDR1-251ENST00000503670 MYO15BQ96JP2 1530 aa17.64■□□□□ 0.41
DDR1-251ENST00000503670 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
DDR1-251ENST00000503670 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
DDR1-251ENST00000503670 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
DDR1-251ENST00000503670 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
DDR1-251ENST00000503670 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDR1-251ENST00000503670 SHROOM4Q9ULL8 1493 aa16.97■□□□□ 0.31
DDR1-251ENST00000503670 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
DDR1-251ENST00000503670 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
DDR1-251ENST00000503670 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
DDR1-251ENST00000503670 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
DDR1-251ENST00000503670 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
DDR1-251ENST00000503670 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
DDR1-251ENST00000503670 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
DDR1-251ENST00000503670 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
DDR1-251ENST00000503670 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
DDR1-251ENST00000503670 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.2
DDR1-251ENST00000503670 NCAPD3P42695 1498 aa16.3■□□□□ 0.2
DDR1-251ENST00000503670 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
DDR1-251ENST00000503670 WIZO95785 1651 aa16.27■□□□□ 0.19
DDR1-251ENST00000503670 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
DDR1-251ENST00000503670 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
DDR1-251ENST00000503670 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
DDR1-251ENST00000503670 SUPT5HO00267 1087 aaKnown RBP16.03■□□□□ 0.16
DDR1-251ENST00000503670 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
DDR1-251ENST00000503670 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
DDR1-251ENST00000503670 NESP48681 1621 aa15.84■□□□□ 0.13
DDR1-251ENST00000503670 CADPSQ9ULU8 1353 aa15.84■□□□□ 0.13
DDR1-251ENST00000503670 CFTRP13569 1480 aa15.78■□□□□ 0.12
DDR1-251ENST00000503670 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
DDR1-251ENST00000503670 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
DDR1-251ENST00000503670 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
DDR1-251ENST00000503670 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
DDR1-251ENST00000503670 FANCD2Q9BXW9 1451 aa15.66■□□□□ 0.1
DDR1-251ENST00000503670 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
DDR1-251ENST00000503670 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
DDR1-251ENST00000503670 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
DDR1-251ENST00000503670 WDR62O43379 1518 aa15.5■□□□□ 0.07
DDR1-251ENST00000503670 CUX2O14529 1486 aa15.49■□□□□ 0.07
DDR1-251ENST00000503670 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
DDR1-251ENST00000503670 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
DDR1-251ENST00000503670 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
DDR1-251ENST00000503670 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
DDR1-251ENST00000503670 CUX1P39880 1505 aa15.38■□□□□ 0.05
DDR1-251ENST00000503670 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
DDR1-251ENST00000503670 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
DDR1-251ENST00000503670 TOP2BQ02880 1626 aa15.33■□□□□ 0.04
DDR1-251ENST00000503670 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
DDR1-251ENST00000503670 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
DDR1-251ENST00000503670 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
DDR1-251ENST00000503670 IFT140Q96RY7 1462 aa15.29■□□□□ 0.04
DDR1-251ENST00000503670 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
DDR1-251ENST00000503670 SOGA1O94964 1423 aa15.26■□□□□ 0.03
DDR1-251ENST00000503670 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
DDR1-251ENST00000503670 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
DDR1-251ENST00000503670 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
DDR1-251ENST00000503670 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
DDR1-251ENST00000503670 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
DDR1-251ENST00000503670 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
DDR1-251ENST00000503670 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
DDR1-251ENST00000503670 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.01
DDR1-251ENST00000503670 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
DDR1-251ENST00000503670 GAPVD1Q14C86 1478 aa15.09■□□□□ 0.01
DDR1-251ENST00000503670 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
DDR1-251ENST00000503670 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
DDR1-251ENST00000503670 GRIN2BQ13224 1484 aa15.06■□□□□ 0
DDR1-251ENST00000503670 KIF27Q86VH2 1401 aa15.03■□□□□ -0
DDR1-251ENST00000503670 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
DDR1-251ENST00000503670 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
DDR1-251ENST00000503670 SNAPC4Q5SXM2 1469 aa15□□□□□ -0.01
DDR1-251ENST00000503670 CHD1O14646 1710 aa14.96□□□□□ -0.01
DDR1-251ENST00000503670 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
DDR1-251ENST00000503670 SYNJ2O15056 1496 aa14.94□□□□□ -0.02
DDR1-251ENST00000503670 CUL7Q14999 1698 aa14.93□□□□□ -0.02
DDR1-251ENST00000503670 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
DDR1-251ENST00000503670 FBLN2P98095 1184 aa14.93□□□□□ -0.02
DDR1-251ENST00000503670 IGF1RP08069 1367 aa14.93□□□□□ -0.02
DDR1-251ENST00000503670 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
DDR1-251ENST00000503670 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
DDR1-251ENST00000503670 EEA1Q15075 1411 aa14.9□□□□□ -0.02
DDR1-251ENST00000503670 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
DDR1-251ENST00000503670 GRIN2AQ12879 1464 aa14.87□□□□□ -0.03
DDR1-251ENST00000503670 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
DDR1-251ENST00000503670 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
DDR1-251ENST00000503670 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
DDR1-251ENST00000503670 RAPGEF2Q9Y4G8 1499 aa14.81□□□□□ -0.04
DDR1-251ENST00000503670 CEP170Q5SW79 1584 aa14.78□□□□□ -0.04
DDR1-251ENST00000503670 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
DDR1-251ENST00000503670 NUP160Q12769 1436 aa14.78□□□□□ -0.04
DDR1-251ENST00000503670 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
DDR1-251ENST00000503670 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
DDR1-251ENST00000503670 KIF21BO75037 1637 aa14.73□□□□□ -0.05
DDR1-251ENST00000503670 CTTNBP2Q8WZ74 1663 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms