RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
SYNE4-206ENST00000503121 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
SYNE4-206ENST00000503121 ABCC9O60706 1549 aa25.78■■□□□ 1.72
SYNE4-206ENST00000503121 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
SYNE4-206ENST00000503121 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
SYNE4-206ENST00000503121 NACADO15069 1562 aa24.59■■□□□ 1.53
SYNE4-206ENST00000503121 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
SYNE4-206ENST00000503121 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
SYNE4-206ENST00000503121 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.46
SYNE4-206ENST00000503121 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
SYNE4-206ENST00000503121 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
SYNE4-206ENST00000503121 BICRAQ9NZM4 1560 aa23.9■■□□□ 1.42
SYNE4-206ENST00000503121 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
SYNE4-206ENST00000503121 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
SYNE4-206ENST00000503121 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
SYNE4-206ENST00000503121 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
SYNE4-206ENST00000503121 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
SYNE4-206ENST00000503121 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
SYNE4-206ENST00000503121 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
SYNE4-206ENST00000503121 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
SYNE4-206ENST00000503121 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
SYNE4-206ENST00000503121 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
SYNE4-206ENST00000503121 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
SYNE4-206ENST00000503121 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
SYNE4-206ENST00000503121 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
SYNE4-206ENST00000503121 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
SYNE4-206ENST00000503121 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
SYNE4-206ENST00000503121 WIZO95785 1651 aa22.33■■□□□ 1.16
SYNE4-206ENST00000503121 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
SYNE4-206ENST00000503121 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
SYNE4-206ENST00000503121 NESP48681 1621 aa22.24■■□□□ 1.15
SYNE4-206ENST00000503121 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
SYNE4-206ENST00000503121 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.12
SYNE4-206ENST00000503121 TOP2AP11388 1531 aaKnown RBP22.07■■□□□ 1.12
SYNE4-206ENST00000503121 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
SYNE4-206ENST00000503121 CUX2O14529 1486 aa22.02■■□□□ 1.12
SYNE4-206ENST00000503121 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
SYNE4-206ENST00000503121 CFTRP13569 1480 aa21.88■■□□□ 1.09
SYNE4-206ENST00000503121 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
SYNE4-206ENST00000503121 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
SYNE4-206ENST00000503121 FANCD2Q9BXW9 1451 aa21.82■■□□□ 1.08
SYNE4-206ENST00000503121 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
SYNE4-206ENST00000503121 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
SYNE4-206ENST00000503121 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SYNE4-206ENST00000503121 WDR62O43379 1518 aa21.69■■□□□ 1.06
SYNE4-206ENST00000503121 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
SYNE4-206ENST00000503121 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
SYNE4-206ENST00000503121 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
SYNE4-206ENST00000503121 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
SYNE4-206ENST00000503121 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
SYNE4-206ENST00000503121 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
SYNE4-206ENST00000503121 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
SYNE4-206ENST00000503121 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
SYNE4-206ENST00000503121 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
SYNE4-206ENST00000503121 SOGA1O94964 1423 aa21.2■□□□□ 0.98
SYNE4-206ENST00000503121 CUX1P39880 1505 aa21.19■□□□□ 0.98
SYNE4-206ENST00000503121 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
SYNE4-206ENST00000503121 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
SYNE4-206ENST00000503121 FGD5Q6ZNL6 1462 aa21.17■□□□□ 0.98
SYNE4-206ENST00000503121 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
SYNE4-206ENST00000503121 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.983e-7■■■■■ 30.6
SYNE4-206ENST00000503121 EIF4G3O43432 1585 aaKnown RBP21.13■□□□□ 0.97
SYNE4-206ENST00000503121 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
SYNE4-206ENST00000503121 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
SYNE4-206ENST00000503121 FBLN2P98095 1184 aa21.03■□□□□ 0.96
SYNE4-206ENST00000503121 WDR97A6NE52 1622 aa20.97■□□□□ 0.95
SYNE4-206ENST00000503121 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
SYNE4-206ENST00000503121 SYNJ1O43426 1573 aa20.94■□□□□ 0.94
SYNE4-206ENST00000503121 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
SYNE4-206ENST00000503121 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
SYNE4-206ENST00000503121 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
SYNE4-206ENST00000503121 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
SYNE4-206ENST00000503121 GAPVD1Q14C86 1478 aa20.92■□□□□ 0.94
SYNE4-206ENST00000503121 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
SYNE4-206ENST00000503121 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
SYNE4-206ENST00000503121 CHD1O14646 1710 aa20.89■□□□□ 0.93
SYNE4-206ENST00000503121 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
SYNE4-206ENST00000503121 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
SYNE4-206ENST00000503121 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
SYNE4-206ENST00000503121 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
SYNE4-206ENST00000503121 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
SYNE4-206ENST00000503121 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
SYNE4-206ENST00000503121 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
SYNE4-206ENST00000503121 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
SYNE4-206ENST00000503121 CYB5RLQ6IPT4 315 aa20.68■□□□□ 0.9
SYNE4-206ENST00000503121 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
SYNE4-206ENST00000503121 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
SYNE4-206ENST00000503121 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
SYNE4-206ENST00000503121 CLASP1Q7Z460 1538 aa20.66■□□□□ 0.9
SYNE4-206ENST00000503121 ADAMTS12P58397 1594 aa20.66■□□□□ 0.9
SYNE4-206ENST00000503121 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
SYNE4-206ENST00000503121 IGF1RP08069 1367 aa20.57■□□□□ 0.88
SYNE4-206ENST00000503121 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
SYNE4-206ENST00000503121 NUP160Q12769 1436 aa20.55■□□□□ 0.88
SYNE4-206ENST00000503121 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
SYNE4-206ENST00000503121 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
SYNE4-206ENST00000503121 CUL7Q14999 1698 aa20.44■□□□□ 0.86
SYNE4-206ENST00000503121 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
SYNE4-206ENST00000503121 ERCC6L2Q5T890 1561 aa20.39■□□□□ 0.85
SYNE4-206ENST00000503121 PRG4Q92954 1404 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms