RNA–Protein interactions for RNA: ENST00000503027.1

CCDC112-204, Transcript of coiled-coil domain containing 112, humanhuman

TSL 3

Gene CCDC112, Length 753 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112-204ENST00000503027 NISCHQ9Y2I1 1504 aa56.92■■■■■ 6.7
CCDC112-204ENST00000503027 CCDC180Q9P1Z9 1646 aa50.55■■■■■ 5.68
CCDC112-204ENST00000503027 ABCC9O60706 1549 aa49.19■■■■■ 5.47
CCDC112-204ENST00000503027 ZCCHC6Q5VYS8 1495 aaKnown RBP47.49■■■■■ 5.19
CCDC112-204ENST00000503027 RB1CC1Q8TDY2 1594 aa47.47■■■■■ 5.19
CCDC112-204ENST00000503027 NACADO15069 1562 aa47.46■■■■■ 5.19
CCDC112-204ENST00000503027 DCAF8L2P0C7V8 631 aa47.39■■■■■ 5.18
CCDC112-204ENST00000503027 MYO15BQ96JP2 1530 aa47.27■■■■■ 5.16
CCDC112-204ENST00000503027 DCAF1Q9Y4B6 1507 aa47.15■■■■■ 5.14
CCDC112-204ENST00000503027 UNC13AQ9UPW8 1703 aa46.3■■■■■ 5
CCDC112-204ENST00000503027 SCRIBQ14160 1630 aa46.11■■■■■ 4.97
CCDC112-204ENST00000503027 BICRAQ9NZM4 1560 aa45.97■■■■■ 4.95
CCDC112-204ENST00000503027 PABPN1Q86U42 306 aaKnown RBP eCLIP45.96■■■■■ 4.95
CCDC112-204ENST00000503027 SHROOM4Q9ULL8 1493 aa45.62■■■■■ 4.89
CCDC112-204ENST00000503027 DNAJC5BQ9UF47 199 aa44.85■■■■■ 4.77
CCDC112-204ENST00000503027 EIF4G1Q04637 1599 aaKnown RBP44.77■■■■■ 4.76
CCDC112-204ENST00000503027 CC2D2AQ9P2K1 1620 aa44.51■■■■■ 4.72
CCDC112-204ENST00000503027 CECR2Q9BXF3 1484 aa44.28■■■■■ 4.68
CCDC112-204ENST00000503027 BAZ1AQ9NRL2 1556 aaPredicted RBP44.14■■■■■ 4.66
CCDC112-204ENST00000503027 SMARCA4P51532 1647 aa44.13■■■■■ 4.66
CCDC112-204ENST00000503027 MROH2BQ7Z745 1585 aa43.85■■■■■ 4.61
CCDC112-204ENST00000503027 SMARCA2P51531 1590 aa43.83■■■■■ 4.61
CCDC112-204ENST00000503027 ATAD2BQ9ULI0 1458 aa43.83■■■■■ 4.61
CCDC112-204ENST00000503027 NCAPD3P42695 1498 aa43.77■■■■■ 4.6
CCDC112-204ENST00000503027 PEG3Q9GZU2 1588 aa43.71■■■■■ 4.59
CCDC112-204ENST00000503027 HMGXB3Q12766 1538 aa43.62■■■■■ 4.57
CCDC112-204ENST00000503027 BAZ1BQ9UIG0 1483 aaKnown RBP43.51■■■■■ 4.56
CCDC112-204ENST00000503027 RSF1Q96T23 1441 aaPredicted RBP43.44■■■■■ 4.54
CCDC112-204ENST00000503027 WIZO95785 1651 aa43.37■■■■■ 4.53
CCDC112-204ENST00000503027 TOP2AP11388 1531 aaKnown RBP43■■■■■ 4.47
CCDC112-204ENST00000503027 NESP48681 1621 aa42.61■■■■■ 4.41
CCDC112-204ENST00000503027 LAMC3Q9Y6N6 1575 aa42.61■■■■■ 4.41
CCDC112-204ENST00000503027 CADPSQ9ULU8 1353 aa42.5■■■■■ 4.39
CCDC112-204ENST00000503027 SUPT5HO00267 1087 aaKnown RBP42.46■■■■■ 4.39
CCDC112-204ENST00000503027 CCDC88BA6NC98 1476 aa42.43■■■■■ 4.38
CCDC112-204ENST00000503027 ERCC6Q03468 1493 aa42.43■■■■■ 4.38
CCDC112-204ENST00000503027 CFTRP13569 1480 aa42.31■■■■■ 4.36
CCDC112-204ENST00000503027 PDS5BQ9NTI5 1447 aa42.31■■■■■ 4.36
CCDC112-204ENST00000503027 KIF21AQ7Z4S6 1674 aa42.13■■■■■ 4.34
CCDC112-204ENST00000503027 FANCD2Q9BXW9 1451 aa42.04■■■■■ 4.32
CCDC112-204ENST00000503027 PRDM2Q13029 1718 aa42■■■■■ 4.31
CCDC112-204ENST00000503027 CEP164Q9UPV0 1460 aa41.98■■■■■ 4.31
CCDC112-204ENST00000503027 THOC2Q8NI27 1593 aaKnown RBP41.97■■■■■ 4.31
CCDC112-204ENST00000503027 CUX2O14529 1486 aa41.91■■■■■ 4.3
CCDC112-204ENST00000503027 MRC2Q9UBG0 1479 aa41.87■■■■■ 4.29
CCDC112-204ENST00000503027 WDR62O43379 1518 aa41.73■■■■■ 4.27
CCDC112-204ENST00000503027 URB2Q14146 1524 aaKnown RBP41.59■■■■■ 4.25
CCDC112-204ENST00000503027 ABCC8Q09428 1581 aa41.41■■■■■ 4.22
CCDC112-204ENST00000503027 TOPBP1Q92547 1522 aa41.39■■■■■ 4.22
CCDC112-204ENST00000503027 DNMBPQ6XZF7 1577 aa41.37■■■■■ 4.21
CCDC112-204ENST00000503027 CUX1P39880 1505 aa41.14■■■■■ 4.18
CCDC112-204ENST00000503027 IFT140Q96RY7 1462 aa41.09■■■■■ 4.17
CCDC112-204ENST00000503027 POLA1P09884 1462 aaPredicted RBP41.05■■■■■ 4.16
CCDC112-204ENST00000503027 FGD5Q6ZNL6 1462 aa40.98■■■■■ 4.15
CCDC112-204ENST00000503027 WRNQ14191 1432 aaPredicted RBP eCLIP40.98■■■■■ 4.15
CCDC112-204ENST00000503027 TARBP1Q13395 1621 aaKnown RBP40.9■■■■■ 4.14
CCDC112-204ENST00000503027 TOP2BQ02880 1626 aa40.86■■■■■ 4.13
CCDC112-204ENST00000503027 SOGA1O94964 1423 aa40.86■■■■■ 4.13
CCDC112-204ENST00000503027 BIVM-ERCC5R4GMW8 1640 aa40.85■■■■■ 4.13
CCDC112-204ENST00000503027 SYNJ1O43426 1573 aa40.85■■■■■ 4.13
CCDC112-204ENST00000503027 RAD54L2Q9Y4B4 1467 aa40.83■■■■■ 4.13
CCDC112-204ENST00000503027 ZNF608Q9ULD9 1512 aaPredicted RBP40.83■■■■■ 4.13
CCDC112-204ENST00000503027 EIF4G3O43432 1585 aaKnown RBP40.73■■■■■ 4.11
CCDC112-204ENST00000503027 WDR97A6NE52 1622 aa40.66■■■■■ 4.1
CCDC112-204ENST00000503027 AQRO60306 1485 aaKnown RBP eCLIP40.63■■■■■ 4.09
CCDC112-204ENST00000503027 ABCA10Q8WWZ4 1543 aa40.61■■■■■ 4.09
CCDC112-204ENST00000503027 TDRD9Q8NDG6 1382 aaKnown RBP40.59■■■■■ 4.09
CCDC112-204ENST00000503027 ABCA5Q8WWZ7 1642 aa40.43■■■■■ 4.06
CCDC112-204ENST00000503027 GAPVD1Q14C86 1478 aa40.41■■■■■ 4.06
CCDC112-204ENST00000503027 GRIN2BQ13224 1484 aa40.4■■■■■ 4.06
CCDC112-204ENST00000503027 PBRM1Q86U86 1689 aa40.31■■■■■ 4.04
CCDC112-204ENST00000503027 SNAPC4Q5SXM2 1469 aa40.3■■■■■ 4.04
CCDC112-204ENST00000503027 MAGI1Q96QZ7 1491 aaPredicted RBP40.28■■■■■ 4.04
CCDC112-204ENST00000503027 DNAJC5Q9H3Z4 198 aa40.27■■■■■ 4.04
CCDC112-204ENST00000503027 OSCARQ8IYS5 282 aa40.14■■■■■ 4.02
CCDC112-204ENST00000503027 ERICH3Q5RHP9 1530 aa40.13■■■■■ 4.01
CCDC112-204ENST00000503027 CHD1O14646 1710 aa40.13■■■■■ 4.01
CCDC112-204ENST00000503027 KIF27Q86VH2 1401 aa40.12■■■■■ 4.01
CCDC112-204ENST00000503027 TRIM41Q8WV44 630 aa40.12■■■■■ 4.01
CCDC112-204ENST00000503027 SYNJ2O15056 1496 aa40.11■■■■■ 4.01
CCDC112-204ENST00000503027 FBLN2P98095 1184 aa40.09■■■■■ 4.01
CCDC112-204ENST00000503027 ADAMTS12P58397 1594 aa40.04■■■■■ 4
CCDC112-204ENST00000503027 CHMP7Q8WUX9 453 aaPredicted RBP40.03■■■■■ 4
CCDC112-204ENST00000503027 FHAD1B1AJZ9 1412 aa39.97■■■■□ 3.99
CCDC112-204ENST00000503027 GRIN2AQ12879 1464 aa39.88■■■■□ 3.97
CCDC112-204ENST00000503027 IGF1RP08069 1367 aa39.87■■■■□ 3.97
CCDC112-204ENST00000503027 CUL7Q14999 1698 aa39.82■■■■□ 3.96
CCDC112-204ENST00000503027 CHIC1Q5VXU3 224 aa39.75■■■■□ 3.95
CCDC112-204ENST00000503027 CLASP1Q7Z460 1538 aa39.74■■■■□ 3.95
CCDC112-204ENST00000503027 RUSC2Q8N2Y8 1516 aa39.74■■■■□ 3.95
CCDC112-204ENST00000503027 NUP160Q12769 1436 aa39.68■■■■□ 3.94
CCDC112-204ENST00000503027 CEP170Q5SW79 1584 aa39.65■■■■□ 3.94
CCDC112-204ENST00000503027 CARMIL1Q5VZK9 1371 aa39.65■■■■□ 3.94
CCDC112-204ENST00000503027 ARHGEF11O15085 1522 aa39.54■■■■□ 3.92
CCDC112-204ENST00000503027 EEA1Q15075 1411 aa39.52■■■■□ 3.92
CCDC112-204ENST00000503027 RIMBP3CA6NJZ7 1639 aa39.5■■■■□ 3.91
CCDC112-204ENST00000503027 RIMBP3BA6NNM3 1639 aa39.5■■■■□ 3.91
CCDC112-204ENST00000503027 RIMBP3Q9UFD9 1639 aa39.5■■■■□ 3.91
CCDC112-204ENST00000503027 RAPGEF2Q9Y4G8 1499 aa39.47■■■■□ 3.91
CCDC112-204ENST00000503027 PRXQ9BXM0 1461 aa39.38■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms