RNA–Protein interactions for RNA: ENST00000502985.5

NR1I3-217, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-217ENST00000502985 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
NR1I3-217ENST00000502985 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
NR1I3-217ENST00000502985 ABCC9O60706 1549 aa21.45■■□□□ 1.02
NR1I3-217ENST00000502985 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
NR1I3-217ENST00000502985 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
NR1I3-217ENST00000502985 NACADO15069 1562 aa20.72■□□□□ 0.91
NR1I3-217ENST00000502985 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
NR1I3-217ENST00000502985 DCAF1Q9Y4B6 1507 aa20.62■□□□□ 0.89
NR1I3-217ENST00000502985 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
NR1I3-217ENST00000502985 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
NR1I3-217ENST00000502985 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
NR1I3-217ENST00000502985 BICRAQ9NZM4 1560 aa20.1■□□□□ 0.81
NR1I3-217ENST00000502985 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
NR1I3-217ENST00000502985 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
NR1I3-217ENST00000502985 EIF4G1Q04637 1599 aaKnown RBP19.55■□□□□ 0.72
NR1I3-217ENST00000502985 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
NR1I3-217ENST00000502985 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
NR1I3-217ENST00000502985 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
NR1I3-217ENST00000502985 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
NR1I3-217ENST00000502985 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
NR1I3-217ENST00000502985 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.68
NR1I3-217ENST00000502985 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
NR1I3-217ENST00000502985 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
NR1I3-217ENST00000502985 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
NR1I3-217ENST00000502985 WIZO95785 1651 aa19.13■□□□□ 0.65
NR1I3-217ENST00000502985 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
NR1I3-217ENST00000502985 NCAPD3P42695 1498 aa19.06■□□□□ 0.64
NR1I3-217ENST00000502985 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
NR1I3-217ENST00000502985 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
NR1I3-217ENST00000502985 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
NR1I3-217ENST00000502985 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
NR1I3-217ENST00000502985 NESP48681 1621 aa18.64■□□□□ 0.57
NR1I3-217ENST00000502985 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
NR1I3-217ENST00000502985 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
NR1I3-217ENST00000502985 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
NR1I3-217ENST00000502985 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.55
NR1I3-217ENST00000502985 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
NR1I3-217ENST00000502985 CFTRP13569 1480 aa18.48■□□□□ 0.55
NR1I3-217ENST00000502985 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
NR1I3-217ENST00000502985 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
NR1I3-217ENST00000502985 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
NR1I3-217ENST00000502985 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
NR1I3-217ENST00000502985 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
NR1I3-217ENST00000502985 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
NR1I3-217ENST00000502985 WDR62O43379 1518 aa18.2■□□□□ 0.5
NR1I3-217ENST00000502985 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
NR1I3-217ENST00000502985 CUX2O14529 1486 aa18.15■□□□□ 0.5
NR1I3-217ENST00000502985 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
NR1I3-217ENST00000502985 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
NR1I3-217ENST00000502985 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
NR1I3-217ENST00000502985 CUX1P39880 1505 aa18.08■□□□□ 0.48
NR1I3-217ENST00000502985 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
NR1I3-217ENST00000502985 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
NR1I3-217ENST00000502985 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
NR1I3-217ENST00000502985 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
NR1I3-217ENST00000502985 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
NR1I3-217ENST00000502985 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
NR1I3-217ENST00000502985 TARBP1Q13395 1621 aaKnown RBP17.92■□□□□ 0.46
NR1I3-217ENST00000502985 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
NR1I3-217ENST00000502985 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
NR1I3-217ENST00000502985 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
NR1I3-217ENST00000502985 SOGA1O94964 1423 aa17.86■□□□□ 0.45
NR1I3-217ENST00000502985 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
NR1I3-217ENST00000502985 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
NR1I3-217ENST00000502985 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
NR1I3-217ENST00000502985 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
NR1I3-217ENST00000502985 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
NR1I3-217ENST00000502985 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
NR1I3-217ENST00000502985 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
NR1I3-217ENST00000502985 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
NR1I3-217ENST00000502985 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
NR1I3-217ENST00000502985 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
NR1I3-217ENST00000502985 CHD1O14646 1710 aa17.64■□□□□ 0.41
NR1I3-217ENST00000502985 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
NR1I3-217ENST00000502985 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
NR1I3-217ENST00000502985 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
NR1I3-217ENST00000502985 MAGI1Q96QZ7 1491 aaPredicted RBP17.58■□□□□ 0.41
NR1I3-217ENST00000502985 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
NR1I3-217ENST00000502985 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
NR1I3-217ENST00000502985 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
NR1I3-217ENST00000502985 CUL7Q14999 1698 aa17.52■□□□□ 0.39
NR1I3-217ENST00000502985 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
NR1I3-217ENST00000502985 FBLN2P98095 1184 aa17.5■□□□□ 0.39
NR1I3-217ENST00000502985 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
NR1I3-217ENST00000502985 IGF1RP08069 1367 aa17.45■□□□□ 0.38
NR1I3-217ENST00000502985 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
NR1I3-217ENST00000502985 GRIN2AQ12879 1464 aa17.44■□□□□ 0.38
NR1I3-217ENST00000502985 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
NR1I3-217ENST00000502985 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
NR1I3-217ENST00000502985 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
NR1I3-217ENST00000502985 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
NR1I3-217ENST00000502985 EEA1Q15075 1411 aa17.38■□□□□ 0.37
NR1I3-217ENST00000502985 CLASP1Q7Z460 1538 aa17.35■□□□□ 0.37
NR1I3-217ENST00000502985 RAPGEF2Q9Y4G8 1499 aa17.33■□□□□ 0.37
NR1I3-217ENST00000502985 NUP160Q12769 1436 aa17.32■□□□□ 0.36
NR1I3-217ENST00000502985 PRXQ9BXM0 1461 aa17.31■□□□□ 0.36
NR1I3-217ENST00000502985 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
NR1I3-217ENST00000502985 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
NR1I3-217ENST00000502985 KIF21BO75037 1637 aa17.27■□□□□ 0.36
NR1I3-217ENST00000502985 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms