RNA–Protein interactions for RNA: ENST00000502961.1

TSC22D3-210, Transcript of TSC22 domain family member 3, humanhuman

TSL 4

Gene TSC22D3, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-210ENST00000502961 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
TSC22D3-210ENST00000502961 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
TSC22D3-210ENST00000502961 ABCC9O60706 1549 aa25.39■■□□□ 1.66
TSC22D3-210ENST00000502961 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
TSC22D3-210ENST00000502961 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
TSC22D3-210ENST00000502961 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
TSC22D3-210ENST00000502961 NACADO15069 1562 aa24.34■■□□□ 1.49
TSC22D3-210ENST00000502961 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
TSC22D3-210ENST00000502961 DCAF1Q9Y4B6 1507 aa24.13■■□□□ 1.45
TSC22D3-210ENST00000502961 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
TSC22D3-210ENST00000502961 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
TSC22D3-210ENST00000502961 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
TSC22D3-210ENST00000502961 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
TSC22D3-210ENST00000502961 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
TSC22D3-210ENST00000502961 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
TSC22D3-210ENST00000502961 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
TSC22D3-210ENST00000502961 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
TSC22D3-210ENST00000502961 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
TSC22D3-210ENST00000502961 SMARCA4P51532 1647 aa22.67■■□□□ 1.22
TSC22D3-210ENST00000502961 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
TSC22D3-210ENST00000502961 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
TSC22D3-210ENST00000502961 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
TSC22D3-210ENST00000502961 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
TSC22D3-210ENST00000502961 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
TSC22D3-210ENST00000502961 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.18
TSC22D3-210ENST00000502961 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
TSC22D3-210ENST00000502961 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
TSC22D3-210ENST00000502961 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
TSC22D3-210ENST00000502961 WIZO95785 1651 aa22.33■■□□□ 1.17
TSC22D3-210ENST00000502961 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
TSC22D3-210ENST00000502961 NESP48681 1621 aa22■■□□□ 1.11
TSC22D3-210ENST00000502961 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
TSC22D3-210ENST00000502961 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
TSC22D3-210ENST00000502961 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
TSC22D3-210ENST00000502961 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
TSC22D3-210ENST00000502961 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
TSC22D3-210ENST00000502961 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
TSC22D3-210ENST00000502961 CFTRP13569 1480 aa21.73■■□□□ 1.07
TSC22D3-210ENST00000502961 KIF21AQ7Z4S6 1674 aa21.68■■□□□ 1.06
TSC22D3-210ENST00000502961 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
TSC22D3-210ENST00000502961 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.05
TSC22D3-210ENST00000502961 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
TSC22D3-210ENST00000502961 CEP164Q9UPV0 1460 aa21.57■■□□□ 1.04
TSC22D3-210ENST00000502961 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
TSC22D3-210ENST00000502961 CUX2O14529 1486 aa21.52■■□□□ 1.03
TSC22D3-210ENST00000502961 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
TSC22D3-210ENST00000502961 WDR62O43379 1518 aa21.43■■□□□ 1.02
TSC22D3-210ENST00000502961 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
TSC22D3-210ENST00000502961 TOPBP1Q92547 1522 aa21.28■■□□□ 1
TSC22D3-210ENST00000502961 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
TSC22D3-210ENST00000502961 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
TSC22D3-210ENST00000502961 CUX1P39880 1505 aa21.17■□□□□ 0.98
TSC22D3-210ENST00000502961 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
TSC22D3-210ENST00000502961 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
TSC22D3-210ENST00000502961 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
TSC22D3-210ENST00000502961 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
TSC22D3-210ENST00000502961 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
TSC22D3-210ENST00000502961 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
TSC22D3-210ENST00000502961 SOGA1O94964 1423 aa21.04■□□□□ 0.96
TSC22D3-210ENST00000502961 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
TSC22D3-210ENST00000502961 SYNJ1O43426 1573 aa21.01■□□□□ 0.95
TSC22D3-210ENST00000502961 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
TSC22D3-210ENST00000502961 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
TSC22D3-210ENST00000502961 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
TSC22D3-210ENST00000502961 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
TSC22D3-210ENST00000502961 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
TSC22D3-210ENST00000502961 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
TSC22D3-210ENST00000502961 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
TSC22D3-210ENST00000502961 GAPVD1Q14C86 1478 aa20.78■□□□□ 0.92
TSC22D3-210ENST00000502961 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
TSC22D3-210ENST00000502961 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
TSC22D3-210ENST00000502961 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
TSC22D3-210ENST00000502961 FBLN2P98095 1184 aa20.73■□□□□ 0.91
TSC22D3-210ENST00000502961 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
TSC22D3-210ENST00000502961 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
TSC22D3-210ENST00000502961 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
TSC22D3-210ENST00000502961 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
TSC22D3-210ENST00000502961 CHD1O14646 1710 aa20.64■□□□□ 0.9
TSC22D3-210ENST00000502961 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
TSC22D3-210ENST00000502961 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
TSC22D3-210ENST00000502961 SYNJ2O15056 1496 aa20.6■□□□□ 0.89
TSC22D3-210ENST00000502961 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.88
TSC22D3-210ENST00000502961 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
TSC22D3-210ENST00000502961 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
TSC22D3-210ENST00000502961 IGF1RP08069 1367 aa20.53■□□□□ 0.88
TSC22D3-210ENST00000502961 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.87
TSC22D3-210ENST00000502961 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
TSC22D3-210ENST00000502961 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
TSC22D3-210ENST00000502961 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
TSC22D3-210ENST00000502961 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
TSC22D3-210ENST00000502961 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
TSC22D3-210ENST00000502961 CUL7Q14999 1698 aa20.39■□□□□ 0.86
TSC22D3-210ENST00000502961 NUP160Q12769 1436 aa20.39■□□□□ 0.85
TSC22D3-210ENST00000502961 ARHGEF11O15085 1522 aa20.35■□□□□ 0.85
TSC22D3-210ENST00000502961 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
TSC22D3-210ENST00000502961 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
TSC22D3-210ENST00000502961 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
TSC22D3-210ENST00000502961 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
TSC22D3-210ENST00000502961 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
TSC22D3-210ENST00000502961 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms