RNA–Protein interactions for RNA: ENST00000502891.6

C12orf43-203, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 3

Gene C12orf43, Length 1,702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-203ENST00000502891 NISCHQ9Y2I1 1504 aa39.47■■■■□ 3.91
C12orf43-203ENST00000502891 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
C12orf43-203ENST00000502891 ZCCHC6Q5VYS8 1495 aaKnown RBP33.27■■■□□ 2.92
C12orf43-203ENST00000502891 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
C12orf43-203ENST00000502891 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.79
C12orf43-203ENST00000502891 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
C12orf43-203ENST00000502891 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
C12orf43-203ENST00000502891 NACADO15069 1562 aa31.69■■■□□ 2.66
C12orf43-203ENST00000502891 ABCC9O60706 1549 aa31.65■■■□□ 2.66
C12orf43-203ENST00000502891 SUPT5HO00267 1087 aaKnown RBP31.64■■■□□ 2.66
C12orf43-203ENST00000502891 SCRIBQ14160 1630 aa31.39■■■□□ 2.62
C12orf43-203ENST00000502891 RB1CC1Q8TDY2 1594 aa31.25■■■□□ 2.59
C12orf43-203ENST00000502891 RSF1Q96T23 1441 aaPredicted RBP30.84■■■□□ 2.53
C12orf43-203ENST00000502891 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
C12orf43-203ENST00000502891 UNC13AQ9UPW8 1703 aa30.57■■■□□ 2.48
C12orf43-203ENST00000502891 CECR2Q9BXF3 1484 aa30.56■■■□□ 2.48
C12orf43-203ENST00000502891 MROH2BQ7Z745 1585 aa30.47■■■□□ 2.47
C12orf43-203ENST00000502891 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
C12orf43-203ENST00000502891 WIZO95785 1651 aa30.25■■■□□ 2.43
C12orf43-203ENST00000502891 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
C12orf43-203ENST00000502891 SMARCA4P51532 1647 aa30.19■■■□□ 2.42
C12orf43-203ENST00000502891 TOP2AP11388 1531 aaKnown RBP30■■■□□ 2.39
C12orf43-203ENST00000502891 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
C12orf43-203ENST00000502891 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
C12orf43-203ENST00000502891 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
C12orf43-203ENST00000502891 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
C12orf43-203ENST00000502891 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.34
C12orf43-203ENST00000502891 EIF4G1Q04637 1599 aaKnown RBP29.7■■■□□ 2.34
C12orf43-203ENST00000502891 ATAD2BQ9ULI0 1458 aa29.56■■■□□ 2.32
C12orf43-203ENST00000502891 LOC105371045A0A1W2PR82 267 aa29.46■■■□□ 2.31
C12orf43-203ENST00000502891 BAZ1BQ9UIG0 1483 aaKnown RBP29.42■■■□□ 2.3
C12orf43-203ENST00000502891 NCAPD3P42695 1498 aa29.24■■■□□ 2.27
C12orf43-203ENST00000502891 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
C12orf43-203ENST00000502891 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
C12orf43-203ENST00000502891 FAM9AQ8IZU1 332 aaPredicted RBP29.15■■■□□ 2.26
C12orf43-203ENST00000502891 DNAJC5BQ9UF47 199 aa29.11■■■□□ 2.25
C12orf43-203ENST00000502891 EEA1Q15075 1411 aa29.03■■■□□ 2.24
C12orf43-203ENST00000502891 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
C12orf43-203ENST00000502891 SYNJ1O43426 1573 aa28.82■■■□□ 2.2
C12orf43-203ENST00000502891 SOGA1O94964 1423 aa28.81■■■□□ 2.2
C12orf43-203ENST00000502891 PCGF6Q9BYE7 350 aa28.78■■■□□ 2.2
C12orf43-203ENST00000502891 CSRNP3Q8WYN3 585 aa28.76■■■□□ 2.19
C12orf43-203ENST00000502891 CFTRP13569 1480 aa28.74■■■□□ 2.19
C12orf43-203ENST00000502891 TRIM26Q12899 539 aaPredicted RBP28.74■■■□□ 2.19
C12orf43-203ENST00000502891 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
C12orf43-203ENST00000502891 CC2D2AQ9P2K1 1620 aa28.7■■■□□ 2.18
C12orf43-203ENST00000502891 BIVM-ERCC5R4GMW8 1640 aa28.68■■■□□ 2.18
C12orf43-203ENST00000502891 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.18
C12orf43-203ENST00000502891 TNIKQ9UKE5 1360 aa28.64■■■□□ 2.18
C12orf43-203ENST00000502891 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
C12orf43-203ENST00000502891 PRDM2Q13029 1718 aa28.62■■■□□ 2.17
C12orf43-203ENST00000502891 GOLGA3Q08378 1498 aa28.58■■■□□ 2.17
C12orf43-203ENST00000502891 KIF21BO75037 1637 aa28.54■■■□□ 2.16
C12orf43-203ENST00000502891 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
C12orf43-203ENST00000502891 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
C12orf43-203ENST00000502891 HRCP23327 699 aa28.52■■■□□ 2.16
C12orf43-203ENST00000502891 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
C12orf43-203ENST00000502891 CUX1P39880 1505 aa28.46■■■□□ 2.15
C12orf43-203ENST00000502891 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
C12orf43-203ENST00000502891 KIF27Q86VH2 1401 aa28.27■■■□□ 2.12
C12orf43-203ENST00000502891 ERICH3Q5RHP9 1530 aa28.25■■■□□ 2.11
C12orf43-203ENST00000502891 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
C12orf43-203ENST00000502891 RAPGEF2Q9Y4G8 1499 aa28.2■■■□□ 2.11
C12orf43-203ENST00000502891 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
C12orf43-203ENST00000502891 LAMC3Q9Y6N6 1575 aa28.14■■■□□ 2.1
C12orf43-203ENST00000502891 CLIP1P30622 1438 aa28.12■■■□□ 2.09
C12orf43-203ENST00000502891 FGD5Q6ZNL6 1462 aa28.05■■■□□ 2.08
C12orf43-203ENST00000502891 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
C12orf43-203ENST00000502891 ZEB1P37275 1124 aaPredicted RBP28.01■■■□□ 2.07
C12orf43-203ENST00000502891 CUX2O14529 1486 aa28■■■□□ 2.07
C12orf43-203ENST00000502891 VPS8Q8N3P4 1428 aa27.98■■■□□ 2.07
C12orf43-203ENST00000502891 NESP48681 1621 aa27.97■■■□□ 2.07
C12orf43-203ENST00000502891 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.07
C12orf43-203ENST00000502891 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
C12orf43-203ENST00000502891 IGF1RP08069 1367 aa27.94■■■□□ 2.06
C12orf43-203ENST00000502891 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
C12orf43-203ENST00000502891 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
C12orf43-203ENST00000502891 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
C12orf43-203ENST00000502891 CARMIL1Q5VZK9 1371 aa27.82■■■□□ 2.04
C12orf43-203ENST00000502891 APLP2Q06481 763 aa27.78■■■□□ 2.04
C12orf43-203ENST00000502891 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
C12orf43-203ENST00000502891 ARAP1Q96P48 1450 aa27.74■■■□□ 2.03
C12orf43-203ENST00000502891 RAD54L2Q9Y4B4 1467 aa27.72■■■□□ 2.03
C12orf43-203ENST00000502891 CUL7Q14999 1698 aa27.68■■■□□ 2.02
C12orf43-203ENST00000502891 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
C12orf43-203ENST00000502891 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
C12orf43-203ENST00000502891 RANGAP1P46060 587 aaPredicted RBP27.64■■■□□ 2.02
C12orf43-203ENST00000502891 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
C12orf43-203ENST00000502891 TTBK1Q5TCY1 1321 aaPredicted RBP27.58■■■□□ 2.01
C12orf43-203ENST00000502891 ABCA5Q8WWZ7 1642 aa27.55■■■□□ 2
C12orf43-203ENST00000502891 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
C12orf43-203ENST00000502891 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
C12orf43-203ENST00000502891 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
C12orf43-203ENST00000502891 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
C12orf43-203ENST00000502891 CCER1Q8TC90 406 aaPredicted RBP27.45■■□□□ 1.99
C12orf43-203ENST00000502891 EFCAB5A4FU69 1503 aa27.43■■□□□ 1.98
C12orf43-203ENST00000502891 CTTNBP2Q8WZ74 1663 aa27.42■■□□□ 1.98
C12orf43-203ENST00000502891 FHAD1B1AJZ9 1412 aa27.42■■□□□ 1.98
C12orf43-203ENST00000502891 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
C12orf43-203ENST00000502891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms