RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
CSF1R-202ENST00000502660 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
CSF1R-202ENST00000502660 ABCC9O60706 1549 aa31.71■■■□□ 2.67
CSF1R-202ENST00000502660 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.63
CSF1R-202ENST00000502660 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
CSF1R-202ENST00000502660 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
CSF1R-202ENST00000502660 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
CSF1R-202ENST00000502660 NACADO15069 1562 aa30.67■■■□□ 2.5
CSF1R-202ENST00000502660 RB1CC1Q8TDY2 1594 aa30.43■■■□□ 2.46
CSF1R-202ENST00000502660 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
CSF1R-202ENST00000502660 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
CSF1R-202ENST00000502660 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
CSF1R-202ENST00000502660 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
CSF1R-202ENST00000502660 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.3
CSF1R-202ENST00000502660 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
CSF1R-202ENST00000502660 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
CSF1R-202ENST00000502660 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
CSF1R-202ENST00000502660 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.24
CSF1R-202ENST00000502660 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
CSF1R-202ENST00000502660 MROH2BQ7Z745 1585 aa28.93■■■□□ 2.22
CSF1R-202ENST00000502660 SMARCA4P51532 1647 aa28.86■■■□□ 2.21
CSF1R-202ENST00000502660 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
CSF1R-202ENST00000502660 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
CSF1R-202ENST00000502660 WIZO95785 1651 aa28.66■■■□□ 2.18
CSF1R-202ENST00000502660 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
CSF1R-202ENST00000502660 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
CSF1R-202ENST00000502660 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
CSF1R-202ENST00000502660 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
CSF1R-202ENST00000502660 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
CSF1R-202ENST00000502660 BAZ1BQ9UIG0 1483 aaKnown RBP28.29■■■□□ 2.12
CSF1R-202ENST00000502660 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
CSF1R-202ENST00000502660 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
CSF1R-202ENST00000502660 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
CSF1R-202ENST00000502660 CFTRP13569 1480 aa27.59■■■□□ 2.01
CSF1R-202ENST00000502660 CADPSQ9ULU8 1353 aa27.56■■■□□ 2
CSF1R-202ENST00000502660 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
CSF1R-202ENST00000502660 PRDM2Q13029 1718 aa27.39■■□□□ 1.98
CSF1R-202ENST00000502660 ERCC6Q03468 1493 aa27.37■■□□□ 1.97
CSF1R-202ENST00000502660 ABCC8Q09428 1581 aa27.37■■□□□ 1.97
CSF1R-202ENST00000502660 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
CSF1R-202ENST00000502660 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
CSF1R-202ENST00000502660 NESP48681 1621 aa27.33■■□□□ 1.97
CSF1R-202ENST00000502660 FANCD2Q9BXW9 1451 aa27.2■■□□□ 1.95
CSF1R-202ENST00000502660 CUX2O14529 1486 aa27.2■■□□□ 1.94
CSF1R-202ENST00000502660 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
CSF1R-202ENST00000502660 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
CSF1R-202ENST00000502660 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
CSF1R-202ENST00000502660 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
CSF1R-202ENST00000502660 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
CSF1R-202ENST00000502660 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
CSF1R-202ENST00000502660 CUX1P39880 1505 aa27.06■■□□□ 1.92
CSF1R-202ENST00000502660 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
CSF1R-202ENST00000502660 DNMBPQ6XZF7 1577 aa26.93■■□□□ 1.9
CSF1R-202ENST00000502660 EEA1Q15075 1411 aa26.91■■□□□ 1.9
CSF1R-202ENST00000502660 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
CSF1R-202ENST00000502660 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
CSF1R-202ENST00000502660 SOGA1O94964 1423 aa26.86■■□□□ 1.89
CSF1R-202ENST00000502660 URB2Q14146 1524 aaKnown RBP26.86■■□□□ 1.89
CSF1R-202ENST00000502660 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
CSF1R-202ENST00000502660 MRC2Q9UBG0 1479 aa26.8■■□□□ 1.88
CSF1R-202ENST00000502660 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
CSF1R-202ENST00000502660 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
CSF1R-202ENST00000502660 WDR62O43379 1518 aa26.74■■□□□ 1.87
CSF1R-202ENST00000502660 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
CSF1R-202ENST00000502660 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
CSF1R-202ENST00000502660 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
CSF1R-202ENST00000502660 DNAJC5Q9H3Z4 198 aa26.69■■□□□ 1.86
CSF1R-202ENST00000502660 ABCA10Q8WWZ4 1543 aa26.62■■□□□ 1.85
CSF1R-202ENST00000502660 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
CSF1R-202ENST00000502660 WDR97A6NE52 1622 aa26.48■■□□□ 1.83
CSF1R-202ENST00000502660 KIF21BO75037 1637 aa26.48■■□□□ 1.83
CSF1R-202ENST00000502660 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
CSF1R-202ENST00000502660 IFT140Q96RY7 1462 aa26.47■■□□□ 1.83
CSF1R-202ENST00000502660 IGF1RP08069 1367 aa26.47■■□□□ 1.83
CSF1R-202ENST00000502660 GOLGA3Q08378 1498 aa26.45■■□□□ 1.82
CSF1R-202ENST00000502660 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
CSF1R-202ENST00000502660 PRXQ9BXM0 1461 aa26.43■■□□□ 1.82
CSF1R-202ENST00000502660 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
CSF1R-202ENST00000502660 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
CSF1R-202ENST00000502660 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
CSF1R-202ENST00000502660 TNIKQ9UKE5 1360 aa26.37■■□□□ 1.81
CSF1R-202ENST00000502660 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
CSF1R-202ENST00000502660 UBTFP17480 764 aaKnown RBP26.36■■□□□ 1.81
CSF1R-202ENST00000502660 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
CSF1R-202ENST00000502660 RAPGEF2Q9Y4G8 1499 aa26.33■■□□□ 1.81
CSF1R-202ENST00000502660 CUL7Q14999 1698 aa26.26■■□□□ 1.79
CSF1R-202ENST00000502660 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.79
CSF1R-202ENST00000502660 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
CSF1R-202ENST00000502660 GRIN2BQ13224 1484 aa26.22■■□□□ 1.79
CSF1R-202ENST00000502660 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
CSF1R-202ENST00000502660 EIF4G3O43432 1585 aaKnown RBP26.14■■□□□ 1.77
CSF1R-202ENST00000502660 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
CSF1R-202ENST00000502660 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
CSF1R-202ENST00000502660 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
CSF1R-202ENST00000502660 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
CSF1R-202ENST00000502660 CLIP1P30622 1438 aa26.01■■□□□ 1.75
CSF1R-202ENST00000502660 SNAPC4Q5SXM2 1469 aa26.01■■□□□ 1.75
CSF1R-202ENST00000502660 OSCARQ8IYS5 282 aa25.95■■□□□ 1.74
CSF1R-202ENST00000502660 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
CSF1R-202ENST00000502660 CHMP7Q8WUX9 453 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms