RNA–Protein interactions for RNA: ENST00000502409.1

PRDM5-204, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 1,044 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-204ENST00000502409 AEBP2Q6ZN18 517 aaPredicted RBP29.82■■■□□ 2.36
PRDM5-204ENST00000502409 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.35
PRDM5-204ENST00000502409 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
PRDM5-204ENST00000502409 CCDC180Q9P1Z9 1646 aa26.45■■□□□ 1.82
PRDM5-204ENST00000502409 SENP3Q9H4L4 574 aaPredicted RBP25.5■■□□□ 1.67
PRDM5-204ENST00000502409 ABCC9O60706 1549 aa25.48■■□□□ 1.67
PRDM5-204ENST00000502409 PHF23Q9BUL5 403 aaPredicted RBP25.11■■□□□ 1.61
PRDM5-204ENST00000502409 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
PRDM5-204ENST00000502409 NACADO15069 1562 aa24.8■■□□□ 1.56
PRDM5-204ENST00000502409 MYO15BQ96JP2 1530 aa24.77■■□□□ 1.56
PRDM5-204ENST00000502409 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
PRDM5-204ENST00000502409 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
PRDM5-204ENST00000502409 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
PRDM5-204ENST00000502409 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
PRDM5-204ENST00000502409 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
PRDM5-204ENST00000502409 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
PRDM5-204ENST00000502409 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
PRDM5-204ENST00000502409 FOXD1Q16676 465 aa23.8■■□□□ 1.4
PRDM5-204ENST00000502409 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
PRDM5-204ENST00000502409 EIF4G1Q04637 1599 aaKnown RBP23.3■■□□□ 1.32
PRDM5-204ENST00000502409 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
PRDM5-204ENST00000502409 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
PRDM5-204ENST00000502409 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
PRDM5-204ENST00000502409 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
PRDM5-204ENST00000502409 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
PRDM5-204ENST00000502409 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
PRDM5-204ENST00000502409 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
PRDM5-204ENST00000502409 PEG3Q9GZU2 1588 aa22.88■■□□□ 1.25
PRDM5-204ENST00000502409 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
PRDM5-204ENST00000502409 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
PRDM5-204ENST00000502409 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
PRDM5-204ENST00000502409 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
PRDM5-204ENST00000502409 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
PRDM5-204ENST00000502409 WIZO95785 1651 aa22.65■■□□□ 1.22
PRDM5-204ENST00000502409 TOP2AP11388 1531 aaKnown RBP22.5■■□□□ 1.19
PRDM5-204ENST00000502409 POTEDQ86YR6 584 aa22.45■■□□□ 1.18
PRDM5-204ENST00000502409 MSH5O43196 834 aa22.41■■□□□ 1.18
PRDM5-204ENST00000502409 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
PRDM5-204ENST00000502409 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
PRDM5-204ENST00000502409 SUPT5HO00267 1087 aaKnown RBP22.2■■□□□ 1.14
PRDM5-204ENST00000502409 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
PRDM5-204ENST00000502409 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
PRDM5-204ENST00000502409 CADPSQ9ULU8 1353 aa22.15■■□□□ 1.14
PRDM5-204ENST00000502409 NESP48681 1621 aa22.1■■□□□ 1.13
PRDM5-204ENST00000502409 CFTRP13569 1480 aa22.09■■□□□ 1.13
PRDM5-204ENST00000502409 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
PRDM5-204ENST00000502409 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
PRDM5-204ENST00000502409 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
PRDM5-204ENST00000502409 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
PRDM5-204ENST00000502409 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
PRDM5-204ENST00000502409 ADRA2BP18089 450 aa21.9■■□□□ 1.1
PRDM5-204ENST00000502409 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
PRDM5-204ENST00000502409 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
PRDM5-204ENST00000502409 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
PRDM5-204ENST00000502409 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
PRDM5-204ENST00000502409 CUX2O14529 1486 aa21.77■■□□□ 1.07
PRDM5-204ENST00000502409 WDR62O43379 1518 aa21.73■■□□□ 1.07
PRDM5-204ENST00000502409 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
PRDM5-204ENST00000502409 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
PRDM5-204ENST00000502409 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
PRDM5-204ENST00000502409 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
PRDM5-204ENST00000502409 CUX1P39880 1505 aa21.47■■□□□ 1.03
PRDM5-204ENST00000502409 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
PRDM5-204ENST00000502409 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
PRDM5-204ENST00000502409 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
PRDM5-204ENST00000502409 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
PRDM5-204ENST00000502409 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
PRDM5-204ENST00000502409 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
PRDM5-204ENST00000502409 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
PRDM5-204ENST00000502409 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
PRDM5-204ENST00000502409 WDR97A6NE52 1622 aa21.31■■□□□ 1
PRDM5-204ENST00000502409 SOGA1O94964 1423 aa21.3■■□□□ 1
PRDM5-204ENST00000502409 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
PRDM5-204ENST00000502409 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
PRDM5-204ENST00000502409 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
PRDM5-204ENST00000502409 ZNF608Q9ULD9 1512 aaPredicted RBP21.19■□□□□ 0.98
PRDM5-204ENST00000502409 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
PRDM5-204ENST00000502409 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.97
PRDM5-204ENST00000502409 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
PRDM5-204ENST00000502409 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
PRDM5-204ENST00000502409 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
PRDM5-204ENST00000502409 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
PRDM5-204ENST00000502409 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
PRDM5-204ENST00000502409 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
PRDM5-204ENST00000502409 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
PRDM5-204ENST00000502409 KIF27Q86VH2 1401 aa21■□□□□ 0.95
PRDM5-204ENST00000502409 SNAPC4Q5SXM2 1469 aa20.97■□□□□ 0.95
PRDM5-204ENST00000502409 SYNJ2O15056 1496 aa20.91■□□□□ 0.94
PRDM5-204ENST00000502409 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
PRDM5-204ENST00000502409 CHD1O14646 1710 aa20.88■□□□□ 0.93
PRDM5-204ENST00000502409 CUL7Q14999 1698 aa20.87■□□□□ 0.93
PRDM5-204ENST00000502409 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
PRDM5-204ENST00000502409 IGF1RP08069 1367 aa20.83■□□□□ 0.92
PRDM5-204ENST00000502409 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
PRDM5-204ENST00000502409 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
PRDM5-204ENST00000502409 EEA1Q15075 1411 aa20.81■□□□□ 0.92
PRDM5-204ENST00000502409 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
PRDM5-204ENST00000502409 FBLN2P98095 1184 aa20.78■□□□□ 0.92
PRDM5-204ENST00000502409 RUSC2Q8N2Y8 1516 aa20.74■□□□□ 0.91
PRDM5-204ENST00000502409 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms