RNA–Protein interactions for RNA: ENST00000500890.6

LRAT-203, Transcript of lecithin retinol acyltransferase, humanhuman

TSL 2

Gene LRAT, Length 1,776 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-203ENST00000500890 NISCHQ9Y2I1 1504 aa49.8■■■■■ 5.56
LRAT-203ENST00000500890 CCDC180Q9P1Z9 1646 aa43.76■■■■■ 4.6
LRAT-203ENST00000500890 ABCC9O60706 1549 aa42.09■■■■■ 4.33
LRAT-203ENST00000500890 ZCCHC6Q5VYS8 1495 aaKnown RBP41.7■■■■■ 4.27
LRAT-203ENST00000500890 DCAF1Q9Y4B6 1507 aa41.19■■■■■ 4.18
LRAT-203ENST00000500890 DCAF8L2P0C7V8 631 aa41.17■■■■■ 4.18
LRAT-203ENST00000500890 MYO15BQ96JP2 1530 aa41.01■■■■■ 4.15
LRAT-203ENST00000500890 NACADO15069 1562 aa40.94■■■■■ 4.14
LRAT-203ENST00000500890 RB1CC1Q8TDY2 1594 aa40.74■■■■■ 4.11
LRAT-203ENST00000500890 SCRIBQ14160 1630 aa40.12■■■■■ 4.01
LRAT-203ENST00000500890 UNC13AQ9UPW8 1703 aa39.97■■■■□ 3.99
LRAT-203ENST00000500890 SHROOM4Q9ULL8 1493 aa39.96■■■■□ 3.99
LRAT-203ENST00000500890 BICRAQ9NZM4 1560 aa39.68■■■■□ 3.94
LRAT-203ENST00000500890 PABPN1Q86U42 306 aaKnown RBP eCLIP39.52■■■■□ 3.92
LRAT-203ENST00000500890 CECR2Q9BXF3 1484 aa38.8■■■■□ 3.8
LRAT-203ENST00000500890 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
LRAT-203ENST00000500890 MROH2BQ7Z745 1585 aa38.47■■■■□ 3.75
LRAT-203ENST00000500890 BAZ1AQ9NRL2 1556 aaPredicted RBP38.46■■■■□ 3.75
LRAT-203ENST00000500890 SMARCA4P51532 1647 aa38.44■■■■□ 3.74
LRAT-203ENST00000500890 RSF1Q96T23 1441 aaPredicted RBP38.34■■■■□ 3.73
LRAT-203ENST00000500890 CC2D2AQ9P2K1 1620 aa38.09■■■■□ 3.69
LRAT-203ENST00000500890 WIZO95785 1651 aa38.07■■■■□ 3.69
LRAT-203ENST00000500890 PEG3Q9GZU2 1588 aa38.05■■■■□ 3.68
LRAT-203ENST00000500890 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
LRAT-203ENST00000500890 SUPT5HO00267 1087 aaKnown RBP37.99■■■■□ 3.67
LRAT-203ENST00000500890 DNAJC5BQ9UF47 199 aa37.96■■■■□ 3.67
LRAT-203ENST00000500890 SMARCA2P51531 1590 aa37.91■■■■□ 3.66
LRAT-203ENST00000500890 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
LRAT-203ENST00000500890 HMGXB3Q12766 1538 aa37.7■■■■□ 3.63
LRAT-203ENST00000500890 BAZ1BQ9UIG0 1483 aaKnown RBP37.69■■■■□ 3.62
LRAT-203ENST00000500890 TOP2AP11388 1531 aaKnown RBP37.65■■■■□ 3.62
LRAT-203ENST00000500890 CCDC88BA6NC98 1476 aa37.27■■■■□ 3.56
LRAT-203ENST00000500890 CADPSQ9ULU8 1353 aa36.77■■■■□ 3.48
LRAT-203ENST00000500890 CFTRP13569 1480 aa36.77■■■■□ 3.48
LRAT-203ENST00000500890 NESP48681 1621 aa36.75■■■■□ 3.47
LRAT-203ENST00000500890 LAMC3Q9Y6N6 1575 aa36.63■■■■□ 3.45
LRAT-203ENST00000500890 PRDM2Q13029 1718 aa36.46■■■■□ 3.43
LRAT-203ENST00000500890 FANCD2Q9BXW9 1451 aa36.35■■■■□ 3.41
LRAT-203ENST00000500890 PDS5BQ9NTI5 1447 aa36.33■■■■□ 3.41
LRAT-203ENST00000500890 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.4
LRAT-203ENST00000500890 ABCC8Q09428 1581 aa36.22■■■■□ 3.39
LRAT-203ENST00000500890 CEP164Q9UPV0 1460 aa36.18■■■■□ 3.38
LRAT-203ENST00000500890 ERCC6Q03468 1493 aa36.08■■■■□ 3.37
LRAT-203ENST00000500890 CHIC1Q5VXU3 224 aa36.04■■■■□ 3.36
LRAT-203ENST00000500890 WRNQ14191 1432 aaPredicted RBP eCLIP36.04■■■■□ 3.36
LRAT-203ENST00000500890 CUX1P39880 1505 aa36.02■■■■□ 3.36
LRAT-203ENST00000500890 URB2Q14146 1524 aaKnown RBP36.01■■■■□ 3.36
LRAT-203ENST00000500890 SYNJ1O43426 1573 aa35.99■■■■□ 3.35
LRAT-203ENST00000500890 MRC2Q9UBG0 1479 aa35.95■■■■□ 3.35
LRAT-203ENST00000500890 THOC2Q8NI27 1593 aaKnown RBP35.94■■■■□ 3.34
LRAT-203ENST00000500890 TOPBP1Q92547 1522 aa35.9■■■■□ 3.34
LRAT-203ENST00000500890 DNMBPQ6XZF7 1577 aa35.89■■■■□ 3.34
LRAT-203ENST00000500890 TOP2BQ02880 1626 aa35.87■■■■□ 3.33
LRAT-203ENST00000500890 BIVM-ERCC5R4GMW8 1640 aa35.86■■■■□ 3.33
LRAT-203ENST00000500890 WDR62O43379 1518 aa35.84■■■■□ 3.33
LRAT-203ENST00000500890 TRIM41Q8WV44 630 aa35.76■■■■□ 3.32
LRAT-203ENST00000500890 FGD5Q6ZNL6 1462 aa35.7■■■■□ 3.31
LRAT-203ENST00000500890 POLA1P09884 1462 aaPredicted RBP35.67■■■■□ 3.3
LRAT-203ENST00000500890 CUX2O14529 1486 aa35.59■■■■□ 3.29
LRAT-203ENST00000500890 RAD54L2Q9Y4B4 1467 aa35.55■■■■□ 3.28
LRAT-203ENST00000500890 SOGA1O94964 1423 aa35.48■■■■□ 3.27
LRAT-203ENST00000500890 TARBP1Q13395 1621 aaKnown RBP35.46■■■■□ 3.27
LRAT-203ENST00000500890 ABCA10Q8WWZ4 1543 aa35.38■■■■□ 3.26
LRAT-203ENST00000500890 IFT140Q96RY7 1462 aa35.37■■■■□ 3.25
LRAT-203ENST00000500890 WDR97A6NE52 1622 aa35.37■■■■□ 3.25
LRAT-203ENST00000500890 RUSC2Q8N2Y8 1516 aa35.34■■■■□ 3.25
LRAT-203ENST00000500890 ZNF608Q9ULD9 1512 aaPredicted RBP35.28■■■■□ 3.24
LRAT-203ENST00000500890 TDRD9Q8NDG6 1382 aaKnown RBP35.24■■■■□ 3.23
LRAT-203ENST00000500890 ABCA5Q8WWZ7 1642 aa35.18■■■■□ 3.22
LRAT-203ENST00000500890 AQRO60306 1485 aaKnown RBP eCLIP35.17■■■■□ 3.22
LRAT-203ENST00000500890 KIF27Q86VH2 1401 aa35.16■■■■□ 3.22
LRAT-203ENST00000500890 EIF4G3O43432 1585 aaKnown RBP35.1■■■■□ 3.21
LRAT-203ENST00000500890 FAM9AQ8IZU1 332 aaPredicted RBP35.1■■■■□ 3.21
LRAT-203ENST00000500890 GAPVD1Q14C86 1478 aa35.09■■■■□ 3.21
LRAT-203ENST00000500890 EEA1Q15075 1411 aa35.05■■■■□ 3.2
LRAT-203ENST00000500890 IGF1RP08069 1367 aa35.02■■■■□ 3.2
LRAT-203ENST00000500890 CSRNP3Q8WYN3 585 aa34.95■■■■□ 3.18
LRAT-203ENST00000500890 PBRM1Q86U86 1689 aa34.94■■■■□ 3.18
LRAT-203ENST00000500890 GRIN2BQ13224 1484 aa34.94■■■■□ 3.18
LRAT-203ENST00000500890 ERICH3Q5RHP9 1530 aa34.93■■■■□ 3.18
LRAT-203ENST00000500890 SNAPC4Q5SXM2 1469 aa34.83■■■■□ 3.17
LRAT-203ENST00000500890 PRXQ9BXM0 1461 aa34.83■■■■□ 3.17
LRAT-203ENST00000500890 CARMIL1Q5VZK9 1371 aa34.78■■■■□ 3.16
LRAT-203ENST00000500890 ADAMTS12P58397 1594 aa34.77■■■■□ 3.16
LRAT-203ENST00000500890 CUL7Q14999 1698 aa34.75■■■■□ 3.15
LRAT-203ENST00000500890 MAGI1Q96QZ7 1491 aaPredicted RBP34.74■■■■□ 3.15
LRAT-203ENST00000500890 FHAD1B1AJZ9 1412 aa34.7■■■■□ 3.15
LRAT-203ENST00000500890 KIF21BO75037 1637 aa34.7■■■■□ 3.14
LRAT-203ENST00000500890 RAPGEF2Q9Y4G8 1499 aa34.69■■■■□ 3.14
LRAT-203ENST00000500890 SYNJ2O15056 1496 aa34.62■■■■□ 3.13
LRAT-203ENST00000500890 LOC105371045A0A1W2PR82 267 aa34.62■■■■□ 3.13
LRAT-203ENST00000500890 EHMT2Q96KQ7 1210 aa34.6■■■■□ 3.13
LRAT-203ENST00000500890 GOLGA3Q08378 1498 aa34.55■■■■□ 3.12
LRAT-203ENST00000500890 GRIN2AQ12879 1464 aa34.53■■■■□ 3.12
LRAT-203ENST00000500890 CHMP7Q8WUX9 453 aaPredicted RBP34.48■■■■□ 3.11
LRAT-203ENST00000500890 CHD1O14646 1710 aa34.47■■■■□ 3.11
LRAT-203ENST00000500890 FBLN2P98095 1184 aa34.45■■■■□ 3.11
LRAT-203ENST00000500890 CEP170Q5SW79 1584 aa34.38■■■■□ 3.09
LRAT-203ENST00000500890 NUP160Q12769 1436 aa34.37■■■■□ 3.09
LRAT-203ENST00000500890 UBTFP17480 764 aaKnown RBP34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms