RNA–Protein interactions for RNA: ENST00000500334.1

HOMER2-203, Transcript of homer scaffold protein 2, humanhuman

TSL 1 (best)

Gene HOMER2, Length 1,261 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER2-203ENST00000500334 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
HOMER2-203ENST00000500334 CCDC180Q9P1Z9 1646 aa24.93■■□□□ 1.58
HOMER2-203ENST00000500334 ABCC9O60706 1549 aa24.61■■□□□ 1.53
HOMER2-203ENST00000500334 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
HOMER2-203ENST00000500334 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
HOMER2-203ENST00000500334 NACADO15069 1562 aa23.52■■□□□ 1.36
HOMER2-203ENST00000500334 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
HOMER2-203ENST00000500334 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
HOMER2-203ENST00000500334 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
HOMER2-203ENST00000500334 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
HOMER2-203ENST00000500334 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
HOMER2-203ENST00000500334 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
HOMER2-203ENST00000500334 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
HOMER2-203ENST00000500334 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
HOMER2-203ENST00000500334 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
HOMER2-203ENST00000500334 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
HOMER2-203ENST00000500334 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
HOMER2-203ENST00000500334 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
HOMER2-203ENST00000500334 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
HOMER2-203ENST00000500334 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
HOMER2-203ENST00000500334 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
HOMER2-203ENST00000500334 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
HOMER2-203ENST00000500334 NCAPD3P42695 1498 aa21.76■■□□□ 1.07
HOMER2-203ENST00000500334 SMARCA2P51531 1590 aa21.69■■□□□ 1.06
HOMER2-203ENST00000500334 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
HOMER2-203ENST00000500334 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
HOMER2-203ENST00000500334 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
HOMER2-203ENST00000500334 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
HOMER2-203ENST00000500334 WIZO95785 1651 aa21.5■■□□□ 1.03
HOMER2-203ENST00000500334 NESP48681 1621 aa21.29■■□□□ 1
HOMER2-203ENST00000500334 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
HOMER2-203ENST00000500334 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
HOMER2-203ENST00000500334 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
HOMER2-203ENST00000500334 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
HOMER2-203ENST00000500334 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
HOMER2-203ENST00000500334 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
HOMER2-203ENST00000500334 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
HOMER2-203ENST00000500334 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
HOMER2-203ENST00000500334 CFTRP13569 1480 aa20.99■□□□□ 0.95
HOMER2-203ENST00000500334 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
HOMER2-203ENST00000500334 CUX2O14529 1486 aa20.89■□□□□ 0.94
HOMER2-203ENST00000500334 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
HOMER2-203ENST00000500334 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
HOMER2-203ENST00000500334 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
HOMER2-203ENST00000500334 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
HOMER2-203ENST00000500334 WDR62O43379 1518 aa20.7■□□□□ 0.9
HOMER2-203ENST00000500334 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
HOMER2-203ENST00000500334 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
HOMER2-203ENST00000500334 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
HOMER2-203ENST00000500334 DNAJC5Q9H3Z4 198 aa20.52■□□□□ 0.88
HOMER2-203ENST00000500334 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
HOMER2-203ENST00000500334 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
HOMER2-203ENST00000500334 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
HOMER2-203ENST00000500334 CUX1P39880 1505 aa20.39■□□□□ 0.85
HOMER2-203ENST00000500334 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
HOMER2-203ENST00000500334 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
HOMER2-203ENST00000500334 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
HOMER2-203ENST00000500334 SOGA1O94964 1423 aa20.35■□□□□ 0.85
HOMER2-203ENST00000500334 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
HOMER2-203ENST00000500334 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.84
HOMER2-203ENST00000500334 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
HOMER2-203ENST00000500334 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.84
HOMER2-203ENST00000500334 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
HOMER2-203ENST00000500334 SYNJ1O43426 1573 aa20.19■□□□□ 0.82
HOMER2-203ENST00000500334 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
HOMER2-203ENST00000500334 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
HOMER2-203ENST00000500334 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
HOMER2-203ENST00000500334 FBLN2P98095 1184 aa20.13■□□□□ 0.81
HOMER2-203ENST00000500334 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
HOMER2-203ENST00000500334 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
HOMER2-203ENST00000500334 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
HOMER2-203ENST00000500334 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
HOMER2-203ENST00000500334 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
HOMER2-203ENST00000500334 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
HOMER2-203ENST00000500334 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
HOMER2-203ENST00000500334 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
HOMER2-203ENST00000500334 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
HOMER2-203ENST00000500334 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
HOMER2-203ENST00000500334 CHD1O14646 1710 aa19.93■□□□□ 0.78
HOMER2-203ENST00000500334 PBRM1Q86U86 1689 aa19.92■□□□□ 0.78
HOMER2-203ENST00000500334 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
HOMER2-203ENST00000500334 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
HOMER2-203ENST00000500334 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
HOMER2-203ENST00000500334 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
HOMER2-203ENST00000500334 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
HOMER2-203ENST00000500334 IGF1RP08069 1367 aa19.83■□□□□ 0.76
HOMER2-203ENST00000500334 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
HOMER2-203ENST00000500334 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
HOMER2-203ENST00000500334 ARHGEF11O15085 1522 aa19.74■□□□□ 0.75
HOMER2-203ENST00000500334 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
HOMER2-203ENST00000500334 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
HOMER2-203ENST00000500334 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
HOMER2-203ENST00000500334 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
HOMER2-203ENST00000500334 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
HOMER2-203ENST00000500334 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
HOMER2-203ENST00000500334 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
HOMER2-203ENST00000500334 NUP160Q12769 1436 aa19.7■□□□□ 0.74
HOMER2-203ENST00000500334 CEP170Q5SW79 1584 aa19.68■□□□□ 0.74
HOMER2-203ENST00000500334 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
HOMER2-203ENST00000500334 CUL7Q14999 1698 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms