RNA–Protein interactions for RNA: ENST00000498435.1

IGKV1-27-201, Transcript of immunoglobulin kappa variable 1-27, humanhuman

APPRIS P1 BASIC

Gene IGKV1-27, Length 382 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-27-201ENST00000498435 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
IGKV1-27-201ENST00000498435 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
IGKV1-27-201ENST00000498435 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
IGKV1-27-201ENST00000498435 DCAF1Q9Y4B6 1507 aa17.14■□□□□ 0.33
IGKV1-27-201ENST00000498435 MYO15BQ96JP2 1530 aa16.99■□□□□ 0.31
IGKV1-27-201ENST00000498435 ABCC9O60706 1549 aa16.86■□□□□ 0.29
IGKV1-27-201ENST00000498435 NACADO15069 1562 aa16.81■□□□□ 0.28
IGKV1-27-201ENST00000498435 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
IGKV1-27-201ENST00000498435 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
IGKV1-27-201ENST00000498435 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
IGKV1-27-201ENST00000498435 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
IGKV1-27-201ENST00000498435 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
IGKV1-27-201ENST00000498435 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
IGKV1-27-201ENST00000498435 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
IGKV1-27-201ENST00000498435 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
IGKV1-27-201ENST00000498435 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
IGKV1-27-201ENST00000498435 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
IGKV1-27-201ENST00000498435 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
IGKV1-27-201ENST00000498435 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
IGKV1-27-201ENST00000498435 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
IGKV1-27-201ENST00000498435 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
IGKV1-27-201ENST00000498435 WIZO95785 1651 aa15.65■□□□□ 0.1
IGKV1-27-201ENST00000498435 SMARCA2P51531 1590 aa15.64■□□□□ 0.09
IGKV1-27-201ENST00000498435 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
IGKV1-27-201ENST00000498435 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
IGKV1-27-201ENST00000498435 HMGXB3Q12766 1538 aa15.52■□□□□ 0.07
IGKV1-27-201ENST00000498435 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
IGKV1-27-201ENST00000498435 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.07
IGKV1-27-201ENST00000498435 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
IGKV1-27-201ENST00000498435 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
IGKV1-27-201ENST00000498435 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
IGKV1-27-201ENST00000498435 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
IGKV1-27-201ENST00000498435 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
IGKV1-27-201ENST00000498435 CFTRP13569 1480 aa15.08■□□□□ 0
IGKV1-27-201ENST00000498435 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
IGKV1-27-201ENST00000498435 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
IGKV1-27-201ENST00000498435 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.01
IGKV1-27-201ENST00000498435 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
IGKV1-27-201ENST00000498435 ABCC8Q09428 1581 aa14.95□□□□□ -0.02
IGKV1-27-201ENST00000498435 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
IGKV1-27-201ENST00000498435 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
IGKV1-27-201ENST00000498435 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
IGKV1-27-201ENST00000498435 EEA1Q15075 1411 aa14.86□□□□□ -0.03
IGKV1-27-201ENST00000498435 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
IGKV1-27-201ENST00000498435 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
IGKV1-27-201ENST00000498435 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
IGKV1-27-201ENST00000498435 CUX1P39880 1505 aa14.79□□□□□ -0.04
IGKV1-27-201ENST00000498435 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
IGKV1-27-201ENST00000498435 NESP48681 1621 aa14.75□□□□□ -0.05
IGKV1-27-201ENST00000498435 KIF21AQ7Z4S6 1674 aa14.72□□□□□ -0.05
IGKV1-27-201ENST00000498435 DNAJC5BQ9UF47 199 aa14.7□□□□□ -0.06
IGKV1-27-201ENST00000498435 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
IGKV1-27-201ENST00000498435 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
IGKV1-27-201ENST00000498435 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
IGKV1-27-201ENST00000498435 KIF21BO75037 1637 aa14.63□□□□□ -0.07
IGKV1-27-201ENST00000498435 URB2Q14146 1524 aaKnown RBP14.62□□□□□ -0.07
IGKV1-27-201ENST00000498435 SOGA1O94964 1423 aa14.62□□□□□ -0.07
IGKV1-27-201ENST00000498435 KIF27Q86VH2 1401 aa14.61□□□□□ -0.07
IGKV1-27-201ENST00000498435 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
IGKV1-27-201ENST00000498435 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
IGKV1-27-201ENST00000498435 WDR62O43379 1518 aa14.59□□□□□ -0.07
IGKV1-27-201ENST00000498435 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
IGKV1-27-201ENST00000498435 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
IGKV1-27-201ENST00000498435 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
IGKV1-27-201ENST00000498435 ERCC6Q03468 1493 aa14.56□□□□□ -0.08
IGKV1-27-201ENST00000498435 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
IGKV1-27-201ENST00000498435 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
IGKV1-27-201ENST00000498435 CUX2O14529 1486 aa14.53□□□□□ -0.08
IGKV1-27-201ENST00000498435 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
IGKV1-27-201ENST00000498435 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
IGKV1-27-201ENST00000498435 CUL7Q14999 1698 aa14.5□□□□□ -0.09
IGKV1-27-201ENST00000498435 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
IGKV1-27-201ENST00000498435 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
IGKV1-27-201ENST00000498435 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
IGKV1-27-201ENST00000498435 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
IGKV1-27-201ENST00000498435 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
IGKV1-27-201ENST00000498435 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
IGKV1-27-201ENST00000498435 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
IGKV1-27-201ENST00000498435 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
IGKV1-27-201ENST00000498435 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
IGKV1-27-201ENST00000498435 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
IGKV1-27-201ENST00000498435 IGF1RP08069 1367 aa14.37□□□□□ -0.11
IGKV1-27-201ENST00000498435 CEP162Q5TB80 1403 aa14.35□□□□□ -0.11
IGKV1-27-201ENST00000498435 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
IGKV1-27-201ENST00000498435 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
IGKV1-27-201ENST00000498435 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
IGKV1-27-201ENST00000498435 ADAMTS12P58397 1594 aa14.31□□□□□ -0.12
IGKV1-27-201ENST00000498435 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
IGKV1-27-201ENST00000498435 CTTNBP2Q8WZ74 1663 aa14.3□□□□□ -0.12
IGKV1-27-201ENST00000498435 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
IGKV1-27-201ENST00000498435 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
IGKV1-27-201ENST00000498435 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
IGKV1-27-201ENST00000498435 CLIP1P30622 1438 aa14.26□□□□□ -0.13
IGKV1-27-201ENST00000498435 EFCAB5A4FU69 1503 aa14.22□□□□□ -0.13
IGKV1-27-201ENST00000498435 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
IGKV1-27-201ENST00000498435 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.13
IGKV1-27-201ENST00000498435 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
IGKV1-27-201ENST00000498435 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
IGKV1-27-201ENST00000498435 SYNJ2O15056 1496 aa14.17□□□□□ -0.14
IGKV1-27-201ENST00000498435 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms