RNA–Protein interactions for RNA: ENST00000498069.5

SCG5-208, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 612 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-208ENST00000498069 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
SCG5-208ENST00000498069 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
SCG5-208ENST00000498069 ABCC9O60706 1549 aa21.72■■□□□ 1.07
SCG5-208ENST00000498069 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
SCG5-208ENST00000498069 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
SCG5-208ENST00000498069 NACADO15069 1562 aa20.68■□□□□ 0.9
SCG5-208ENST00000498069 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
SCG5-208ENST00000498069 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
SCG5-208ENST00000498069 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
SCG5-208ENST00000498069 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
SCG5-208ENST00000498069 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
SCG5-208ENST00000498069 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
SCG5-208ENST00000498069 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.8
SCG5-208ENST00000498069 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
SCG5-208ENST00000498069 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
SCG5-208ENST00000498069 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
SCG5-208ENST00000498069 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
SCG5-208ENST00000498069 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
SCG5-208ENST00000498069 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
SCG5-208ENST00000498069 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
SCG5-208ENST00000498069 BAZ1AQ9NRL2 1556 aaPredicted RBP19.08■□□□□ 0.65
SCG5-208ENST00000498069 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
SCG5-208ENST00000498069 SMARCA2P51531 1590 aa19.04■□□□□ 0.64
SCG5-208ENST00000498069 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
SCG5-208ENST00000498069 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
SCG5-208ENST00000498069 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
SCG5-208ENST00000498069 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
SCG5-208ENST00000498069 ERCC6Q03468 1493 aa18.77■□□□□ 0.6
SCG5-208ENST00000498069 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
SCG5-208ENST00000498069 NESP48681 1621 aa18.71■□□□□ 0.58
SCG5-208ENST00000498069 WIZO95785 1651 aa18.68■□□□□ 0.58
SCG5-208ENST00000498069 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
SCG5-208ENST00000498069 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
SCG5-208ENST00000498069 LAMC3Q9Y6N6 1575 aa18.59■□□□□ 0.57
SCG5-208ENST00000498069 CUX2O14529 1486 aa18.58■□□□□ 0.57
SCG5-208ENST00000498069 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
SCG5-208ENST00000498069 CFTRP13569 1480 aa18.41■□□□□ 0.54
SCG5-208ENST00000498069 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
SCG5-208ENST00000498069 FANCD2Q9BXW9 1451 aa18.36■□□□□ 0.53
SCG5-208ENST00000498069 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
SCG5-208ENST00000498069 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
SCG5-208ENST00000498069 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
SCG5-208ENST00000498069 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
SCG5-208ENST00000498069 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
SCG5-208ENST00000498069 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
SCG5-208ENST00000498069 WDR62O43379 1518 aa18.23■□□□□ 0.51
SCG5-208ENST00000498069 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
SCG5-208ENST00000498069 ABCC8Q09428 1581 aa18.05■□□□□ 0.48
SCG5-208ENST00000498069 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
SCG5-208ENST00000498069 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
SCG5-208ENST00000498069 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
SCG5-208ENST00000498069 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
SCG5-208ENST00000498069 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
SCG5-208ENST00000498069 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
SCG5-208ENST00000498069 SOGA1O94964 1423 aa17.88■□□□□ 0.45
SCG5-208ENST00000498069 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
SCG5-208ENST00000498069 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
SCG5-208ENST00000498069 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
SCG5-208ENST00000498069 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
SCG5-208ENST00000498069 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
SCG5-208ENST00000498069 FBLN2P98095 1184 aa17.78■□□□□ 0.44
SCG5-208ENST00000498069 CUX1P39880 1505 aa17.77■□□□□ 0.44
SCG5-208ENST00000498069 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
SCG5-208ENST00000498069 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
SCG5-208ENST00000498069 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
SCG5-208ENST00000498069 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
SCG5-208ENST00000498069 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
SCG5-208ENST00000498069 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
SCG5-208ENST00000498069 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
SCG5-208ENST00000498069 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
SCG5-208ENST00000498069 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
SCG5-208ENST00000498069 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
SCG5-208ENST00000498069 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
SCG5-208ENST00000498069 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
SCG5-208ENST00000498069 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
SCG5-208ENST00000498069 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
SCG5-208ENST00000498069 CYB5RLQ6IPT4 315 aa17.51■□□□□ 0.39
SCG5-208ENST00000498069 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
SCG5-208ENST00000498069 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
SCG5-208ENST00000498069 CHD1O14646 1710 aa17.45■□□□□ 0.38
SCG5-208ENST00000498069 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
SCG5-208ENST00000498069 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
SCG5-208ENST00000498069 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
SCG5-208ENST00000498069 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
SCG5-208ENST00000498069 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
SCG5-208ENST00000498069 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
SCG5-208ENST00000498069 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
SCG5-208ENST00000498069 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
SCG5-208ENST00000498069 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
SCG5-208ENST00000498069 CLASP1Q7Z460 1538 aa17.36■□□□□ 0.37
SCG5-208ENST00000498069 IGF1RP08069 1367 aa17.33■□□□□ 0.36
SCG5-208ENST00000498069 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
SCG5-208ENST00000498069 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
SCG5-208ENST00000498069 NUP160Q12769 1436 aa17.3■□□□□ 0.36
SCG5-208ENST00000498069 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
SCG5-208ENST00000498069 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
SCG5-208ENST00000498069 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
SCG5-208ENST00000498069 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
SCG5-208ENST00000498069 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
SCG5-208ENST00000498069 KIAA0586Q9BVV6 1533 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms