RNA–Protein interactions for RNA: ENST00000497553.2

FOXP1-216, Transcript of forkhead box P1, humanhuman

TSL 4

Gene FOXP1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-216ENST00000497553 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
FOXP1-216ENST00000497553 AEBP2Q6ZN18 517 aaPredicted RBP24.74■■□□□ 1.55
FOXP1-216ENST00000497553 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
FOXP1-216ENST00000497553 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
FOXP1-216ENST00000497553 ABCC9O60706 1549 aa22.26■■□□□ 1.15
FOXP1-216ENST00000497553 ZCCHC6Q5VYS8 1495 aaKnown RBP21.62■■□□□ 1.05
FOXP1-216ENST00000497553 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
FOXP1-216ENST00000497553 NACADO15069 1562 aa21.52■■□□□ 1.04
FOXP1-216ENST00000497553 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
FOXP1-216ENST00000497553 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
FOXP1-216ENST00000497553 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
FOXP1-216ENST00000497553 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
FOXP1-216ENST00000497553 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
FOXP1-216ENST00000497553 SCRIBQ14160 1630 aa21■□□□□ 0.95
FOXP1-216ENST00000497553 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
FOXP1-216ENST00000497553 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
FOXP1-216ENST00000497553 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
FOXP1-216ENST00000497553 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
FOXP1-216ENST00000497553 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
FOXP1-216ENST00000497553 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
FOXP1-216ENST00000497553 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
FOXP1-216ENST00000497553 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
FOXP1-216ENST00000497553 SMARCA4P51532 1647 aa20.08■□□□□ 0.8
FOXP1-216ENST00000497553 BAZ1AQ9NRL2 1556 aaPredicted RBP20.06■□□□□ 0.8
FOXP1-216ENST00000497553 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
FOXP1-216ENST00000497553 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
FOXP1-216ENST00000497553 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
FOXP1-216ENST00000497553 PEG3Q9GZU2 1588 aa19.85■□□□□ 0.77
FOXP1-216ENST00000497553 FOXD1Q16676 465 aa19.81■□□□□ 0.76
FOXP1-216ENST00000497553 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
FOXP1-216ENST00000497553 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
FOXP1-216ENST00000497553 WIZO95785 1651 aa19.76■□□□□ 0.75
FOXP1-216ENST00000497553 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
FOXP1-216ENST00000497553 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
FOXP1-216ENST00000497553 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
FOXP1-216ENST00000497553 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
FOXP1-216ENST00000497553 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
FOXP1-216ENST00000497553 NESP48681 1621 aa19.31■□□□□ 0.68
FOXP1-216ENST00000497553 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
FOXP1-216ENST00000497553 POTEDQ86YR6 584 aa19.25■□□□□ 0.67
FOXP1-216ENST00000497553 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
FOXP1-216ENST00000497553 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
FOXP1-216ENST00000497553 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
FOXP1-216ENST00000497553 CFTRP13569 1480 aa19.17■□□□□ 0.66
FOXP1-216ENST00000497553 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
FOXP1-216ENST00000497553 PDS5BQ9NTI5 1447 aa19.14■□□□□ 0.65
FOXP1-216ENST00000497553 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
FOXP1-216ENST00000497553 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
FOXP1-216ENST00000497553 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
FOXP1-216ENST00000497553 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
FOXP1-216ENST00000497553 CUX2O14529 1486 aa18.92■□□□□ 0.62
FOXP1-216ENST00000497553 WDR62O43379 1518 aa18.92■□□□□ 0.62
FOXP1-216ENST00000497553 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
FOXP1-216ENST00000497553 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
FOXP1-216ENST00000497553 TOPBP1Q92547 1522 aa18.78■□□□□ 0.6
FOXP1-216ENST00000497553 MSH5O43196 834 aa18.77■□□□□ 0.6
FOXP1-216ENST00000497553 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
FOXP1-216ENST00000497553 CUX1P39880 1505 aa18.71■□□□□ 0.59
FOXP1-216ENST00000497553 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
FOXP1-216ENST00000497553 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
FOXP1-216ENST00000497553 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
FOXP1-216ENST00000497553 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
FOXP1-216ENST00000497553 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
FOXP1-216ENST00000497553 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
FOXP1-216ENST00000497553 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
FOXP1-216ENST00000497553 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
FOXP1-216ENST00000497553 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
FOXP1-216ENST00000497553 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
FOXP1-216ENST00000497553 EIF4G3O43432 1585 aaKnown RBP18.52■□□□□ 0.56
FOXP1-216ENST00000497553 SOGA1O94964 1423 aa18.5■□□□□ 0.55
FOXP1-216ENST00000497553 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
FOXP1-216ENST00000497553 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
FOXP1-216ENST00000497553 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
FOXP1-216ENST00000497553 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.54
FOXP1-216ENST00000497553 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
FOXP1-216ENST00000497553 PIAS4Q8N2W9 510 aaPredicted RBP18.37■□□□□ 0.53
FOXP1-216ENST00000497553 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
FOXP1-216ENST00000497553 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.53
FOXP1-216ENST00000497553 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
FOXP1-216ENST00000497553 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
FOXP1-216ENST00000497553 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
FOXP1-216ENST00000497553 CHD1O14646 1710 aa18.26■□□□□ 0.51
FOXP1-216ENST00000497553 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
FOXP1-216ENST00000497553 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
FOXP1-216ENST00000497553 ADAMTS12P58397 1594 aa18.23■□□□□ 0.51
FOXP1-216ENST00000497553 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
FOXP1-216ENST00000497553 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
FOXP1-216ENST00000497553 CUL7Q14999 1698 aa18.15■□□□□ 0.5
FOXP1-216ENST00000497553 FBLN2P98095 1184 aa18.12■□□□□ 0.49
FOXP1-216ENST00000497553 FHAD1B1AJZ9 1412 aa18.12■□□□□ 0.49
FOXP1-216ENST00000497553 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
FOXP1-216ENST00000497553 GRIN2AQ12879 1464 aa18.09■□□□□ 0.49
FOXP1-216ENST00000497553 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
FOXP1-216ENST00000497553 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
FOXP1-216ENST00000497553 PPP6R1Q9UPN7 881 aa18.09■□□□□ 0.49
FOXP1-216ENST00000497553 IGF1RP08069 1367 aa18.06■□□□□ 0.48
FOXP1-216ENST00000497553 OSCARQ8IYS5 282 aa18.06■□□□□ 0.48
FOXP1-216ENST00000497553 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
FOXP1-216ENST00000497553 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
FOXP1-216ENST00000497553 EEA1Q15075 1411 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms