RNA–Protein interactions for RNA: ENST00000497468.3

RN7SL558P-201, Transcript of RNA, 7SL, cytoplasmic 558, pseudogene, humanhuman

BASIC

Gene RN7SL558P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL558P-201ENST00000497468 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
RN7SL558P-201ENST00000497468 CCDC180Q9P1Z9 1646 aa9.69□□□□□ -0.86
RN7SL558P-201ENST00000497468 AEBP2Q6ZN18 517 aaPredicted RBP9.6□□□□□ -0.87
RN7SL558P-201ENST00000497468 ZCCHC6Q5VYS8 1495 aaKnown RBP9.33□□□□□ -0.92
RN7SL558P-201ENST00000497468 ABCC9O60706 1549 aa9.28□□□□□ -0.92
RN7SL558P-201ENST00000497468 DCAF8L2P0C7V8 631 aa9.24□□□□□ -0.93
RN7SL558P-201ENST00000497468 DCAF1Q9Y4B6 1507 aa9.24□□□□□ -0.93
RN7SL558P-201ENST00000497468 MYO15BQ96JP2 1530 aa9.18□□□□□ -0.94
RN7SL558P-201ENST00000497468 NACADO15069 1562 aa9.11□□□□□ -0.95
RN7SL558P-201ENST00000497468 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
RN7SL558P-201ENST00000497468 SHROOM4Q9ULL8 1493 aa8.98□□□□□ -0.97
RN7SL558P-201ENST00000497468 CHIC1Q5VXU3 224 aa8.94□□□□□ -0.98
RN7SL558P-201ENST00000497468 SCRIBQ14160 1630 aa8.88□□□□□ -0.99
RN7SL558P-201ENST00000497468 POTEDQ86YR6 584 aa8.85□□□□□ -0.99
RN7SL558P-201ENST00000497468 PABPN1Q86U42 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
RN7SL558P-201ENST00000497468 BICRAQ9NZM4 1560 aa8.74□□□□□ -1.01
RN7SL558P-201ENST00000497468 UNC13AQ9UPW8 1703 aa8.7□□□□□ -1.02
RN7SL558P-201ENST00000497468 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
RN7SL558P-201ENST00000497468 SUPT5HO00267 1087 aaKnown RBP8.63□□□□□ -1.03
RN7SL558P-201ENST00000497468 RSF1Q96T23 1441 aaPredicted RBP8.63□□□□□ -1.03
RN7SL558P-201ENST00000497468 BAZ1AQ9NRL2 1556 aaPredicted RBP8.6□□□□□ -1.03
RN7SL558P-201ENST00000497468 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
RN7SL558P-201ENST00000497468 SMARCA4P51532 1647 aa8.54□□□□□ -1.04
RN7SL558P-201ENST00000497468 EIF4G1Q04637 1599 aaKnown RBP8.49□□□□□ -1.05
RN7SL558P-201ENST00000497468 ATAD2BQ9ULI0 1458 aa8.48□□□□□ -1.05
RN7SL558P-201ENST00000497468 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
RN7SL558P-201ENST00000497468 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
RN7SL558P-201ENST00000497468 SMARCA2P51531 1590 aa8.45□□□□□ -1.06
RN7SL558P-201ENST00000497468 WIZO95785 1651 aa8.44□□□□□ -1.06
RN7SL558P-201ENST00000497468 TOP2AP11388 1531 aaKnown RBP8.41□□□□□ -1.06
RN7SL558P-201ENST00000497468 BAZ1BQ9UIG0 1483 aaKnown RBP8.41□□□□□ -1.06
RN7SL558P-201ENST00000497468 HMGXB3Q12766 1538 aa8.39□□□□□ -1.07
RN7SL558P-201ENST00000497468 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
RN7SL558P-201ENST00000497468 CCDC88BA6NC98 1476 aa8.34□□□□□ -1.07
RN7SL558P-201ENST00000497468 DNAJC5BQ9UF47 199 aa8.32□□□□□ -1.08
RN7SL558P-201ENST00000497468 SENP3Q9H4L4 574 aaPredicted RBP8.29□□□□□ -1.08
RN7SL558P-201ENST00000497468 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
RN7SL558P-201ENST00000497468 CFTRP13569 1480 aa8.22□□□□□ -1.09
RN7SL558P-201ENST00000497468 TRIM41Q8WV44 630 aa8.15□□□□□ -1.1
RN7SL558P-201ENST00000497468 PHF23Q9BUL5 403 aaPredicted RBP8.12□□□□□ -1.11
RN7SL558P-201ENST00000497468 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
RN7SL558P-201ENST00000497468 WRNQ14191 1432 aaPredicted RBP eCLIP8.12□□□□□ -1.11
RN7SL558P-201ENST00000497468 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
RN7SL558P-201ENST00000497468 NESP48681 1621 aa8.11□□□□□ -1.11
RN7SL558P-201ENST00000497468 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
RN7SL558P-201ENST00000497468 ABCC8Q09428 1581 aa8.07□□□□□ -1.12
RN7SL558P-201ENST00000497468 CEP164Q9UPV0 1460 aa8.05□□□□□ -1.12
RN7SL558P-201ENST00000497468 CUX1P39880 1505 aa8.03□□□□□ -1.12
RN7SL558P-201ENST00000497468 SYNJ1O43426 1573 aa8.01□□□□□ -1.13
RN7SL558P-201ENST00000497468 TOP2BQ02880 1626 aa8.01□□□□□ -1.13
RN7SL558P-201ENST00000497468 PRDM2Q13029 1718 aa8□□□□□ -1.13
RN7SL558P-201ENST00000497468 ERCC6Q03468 1493 aa7.99□□□□□ -1.13
RN7SL558P-201ENST00000497468 URB2Q14146 1524 aaKnown RBP7.98□□□□□ -1.13
RN7SL558P-201ENST00000497468 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
RN7SL558P-201ENST00000497468 DNMBPQ6XZF7 1577 aa7.98□□□□□ -1.13
RN7SL558P-201ENST00000497468 MRC2Q9UBG0 1479 aa7.98□□□□□ -1.13
RN7SL558P-201ENST00000497468 EEA1Q15075 1411 aa7.97□□□□□ -1.13
RN7SL558P-201ENST00000497468 BIVM-ERCC5R4GMW8 1640 aa7.97□□□□□ -1.13
RN7SL558P-201ENST00000497468 SOGA1O94964 1423 aa7.96□□□□□ -1.13
RN7SL558P-201ENST00000497468 FAM9AQ8IZU1 332 aaPredicted RBP7.96□□□□□ -1.14
RN7SL558P-201ENST00000497468 FGD5Q6ZNL6 1462 aa7.95□□□□□ -1.14
RN7SL558P-201ENST00000497468 CSRNP3Q8WYN3 585 aa7.95□□□□□ -1.14
RN7SL558P-201ENST00000497468 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
RN7SL558P-201ENST00000497468 KIF27Q86VH2 1401 aa7.93□□□□□ -1.14
RN7SL558P-201ENST00000497468 WDR62O43379 1518 aa7.93□□□□□ -1.14
RN7SL558P-201ENST00000497468 KIF21AQ7Z4S6 1674 aa7.92□□□□□ -1.14
RN7SL558P-201ENST00000497468 RUSC2Q8N2Y8 1516 aa7.92□□□□□ -1.14
RN7SL558P-201ENST00000497468 RAD54L2Q9Y4B4 1467 aa7.91□□□□□ -1.14
RN7SL558P-201ENST00000497468 ABCA10Q8WWZ4 1543 aa7.91□□□□□ -1.14
RN7SL558P-201ENST00000497468 CUX2O14529 1486 aa7.9□□□□□ -1.14
RN7SL558P-201ENST00000497468 LOC105371045A0A1W2PR82 267 aa7.9□□□□□ -1.14
RN7SL558P-201ENST00000497468 IGF1RP08069 1367 aa7.89□□□□□ -1.15
RN7SL558P-201ENST00000497468 IFT140Q96RY7 1462 aa7.88□□□□□ -1.15
RN7SL558P-201ENST00000497468 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
RN7SL558P-201ENST00000497468 TDRD9Q8NDG6 1382 aaKnown RBP7.87□□□□□ -1.15
RN7SL558P-201ENST00000497468 FOXD1Q16676 465 aa7.86□□□□□ -1.15
RN7SL558P-201ENST00000497468 PRXQ9BXM0 1461 aa7.85□□□□□ -1.15
RN7SL558P-201ENST00000497468 TARBP1Q13395 1621 aaKnown RBP7.85□□□□□ -1.15
RN7SL558P-201ENST00000497468 GAPVD1Q14C86 1478 aa7.84□□□□□ -1.15
RN7SL558P-201ENST00000497468 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.16
RN7SL558P-201ENST00000497468 AQRO60306 1485 aaKnown RBP eCLIP7.82□□□□□ -1.16
RN7SL558P-201ENST00000497468 GOLGA3Q08378 1498 aa7.82□□□□□ -1.16
RN7SL558P-201ENST00000497468 UBTFP17480 764 aaKnown RBP7.82□□□□□ -1.16
RN7SL558P-201ENST00000497468 TNIKQ9UKE5 1360 aa7.82□□□□□ -1.16
RN7SL558P-201ENST00000497468 EHMT2Q96KQ7 1210 aa7.81□□□□□ -1.16
RN7SL558P-201ENST00000497468 ERICH3Q5RHP9 1530 aa7.81□□□□□ -1.16
RN7SL558P-201ENST00000497468 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
RN7SL558P-201ENST00000497468 WDR97A6NE52 1622 aa7.81□□□□□ -1.16
RN7SL558P-201ENST00000497468 GRIN2BQ13224 1484 aa7.81□□□□□ -1.16
RN7SL558P-201ENST00000497468 KIF21BO75037 1637 aa7.8□□□□□ -1.16
RN7SL558P-201ENST00000497468 RAPGEF2Q9Y4G8 1499 aa7.8□□□□□ -1.16
RN7SL558P-201ENST00000497468 ABCA5Q8WWZ7 1642 aa7.79□□□□□ -1.16
RN7SL558P-201ENST00000497468 FHAD1B1AJZ9 1412 aa7.78□□□□□ -1.16
RN7SL558P-201ENST00000497468 MAGI1Q96QZ7 1491 aaPredicted RBP7.75□□□□□ -1.17
RN7SL558P-201ENST00000497468 CUL7Q14999 1698 aa7.74□□□□□ -1.17
RN7SL558P-201ENST00000497468 EIF4G3O43432 1585 aaKnown RBP7.73□□□□□ -1.17
RN7SL558P-201ENST00000497468 CHMP7Q8WUX9 453 aaPredicted RBP7.73□□□□□ -1.17
RN7SL558P-201ENST00000497468 SNAPC4Q5SXM2 1469 aa7.73□□□□□ -1.17
RN7SL558P-201ENST00000497468 CEP162Q5TB80 1403 aa7.72□□□□□ -1.17
RN7SL558P-201ENST00000497468 SYNJ2O15056 1496 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms