RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-208ENST00000497287 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
GPATCH4-208ENST00000497287 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
GPATCH4-208ENST00000497287 ABCC9O60706 1549 aa14.12□□□□□ -0.15
GPATCH4-208ENST00000497287 ZCCHC6Q5VYS8 1495 aaKnown RBP14.08□□□□□ -0.16
GPATCH4-208ENST00000497287 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
GPATCH4-208ENST00000497287 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
GPATCH4-208ENST00000497287 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
GPATCH4-208ENST00000497287 NACADO15069 1562 aa13.78□□□□□ -0.2
GPATCH4-208ENST00000497287 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
GPATCH4-208ENST00000497287 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
GPATCH4-208ENST00000497287 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
GPATCH4-208ENST00000497287 UNC13AQ9UPW8 1703 aa13.34□□□□□ -0.27
GPATCH4-208ENST00000497287 BICRAQ9NZM4 1560 aa13.23□□□□□ -0.29
GPATCH4-208ENST00000497287 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
GPATCH4-208ENST00000497287 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
GPATCH4-208ENST00000497287 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
GPATCH4-208ENST00000497287 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
GPATCH4-208ENST00000497287 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
GPATCH4-208ENST00000497287 RSF1Q96T23 1441 aaPredicted RBP12.97□□□□□ -0.33
GPATCH4-208ENST00000497287 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
GPATCH4-208ENST00000497287 SMARCA4P51532 1647 aa12.94□□□□□ -0.34
GPATCH4-208ENST00000497287 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
GPATCH4-208ENST00000497287 WIZO95785 1651 aa12.83□□□□□ -0.35
GPATCH4-208ENST00000497287 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
GPATCH4-208ENST00000497287 SMARCA2P51531 1590 aa12.79□□□□□ -0.36
GPATCH4-208ENST00000497287 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
GPATCH4-208ENST00000497287 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
GPATCH4-208ENST00000497287 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
GPATCH4-208ENST00000497287 NCAPD3P42695 1498 aa12.71□□□□□ -0.38
GPATCH4-208ENST00000497287 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
GPATCH4-208ENST00000497287 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
GPATCH4-208ENST00000497287 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
GPATCH4-208ENST00000497287 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
GPATCH4-208ENST00000497287 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
GPATCH4-208ENST00000497287 CFTRP13569 1480 aa12.38□□□□□ -0.43
GPATCH4-208ENST00000497287 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
GPATCH4-208ENST00000497287 PRDM2Q13029 1718 aa12.3□□□□□ -0.44
GPATCH4-208ENST00000497287 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
GPATCH4-208ENST00000497287 NESP48681 1621 aa12.26□□□□□ -0.45
GPATCH4-208ENST00000497287 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
GPATCH4-208ENST00000497287 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
GPATCH4-208ENST00000497287 WRNQ14191 1432 aaPredicted RBP eCLIP12.23□□□□□ -0.45
GPATCH4-208ENST00000497287 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
GPATCH4-208ENST00000497287 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
GPATCH4-208ENST00000497287 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
GPATCH4-208ENST00000497287 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
GPATCH4-208ENST00000497287 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
GPATCH4-208ENST00000497287 CUX1P39880 1505 aa12.13□□□□□ -0.47
GPATCH4-208ENST00000497287 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
GPATCH4-208ENST00000497287 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
GPATCH4-208ENST00000497287 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
GPATCH4-208ENST00000497287 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
GPATCH4-208ENST00000497287 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
GPATCH4-208ENST00000497287 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
GPATCH4-208ENST00000497287 CUX2O14529 1486 aa12.05□□□□□ -0.48
GPATCH4-208ENST00000497287 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.48
GPATCH4-208ENST00000497287 EEA1Q15075 1411 aa12.02□□□□□ -0.49
GPATCH4-208ENST00000497287 FAM9AQ8IZU1 332 aaPredicted RBP12□□□□□ -0.49
GPATCH4-208ENST00000497287 SOGA1O94964 1423 aa12□□□□□ -0.49
GPATCH4-208ENST00000497287 POLA1P09884 1462 aaPredicted RBP11.99□□□□□ -0.49
GPATCH4-208ENST00000497287 WDR62O43379 1518 aa11.99□□□□□ -0.49
GPATCH4-208ENST00000497287 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
GPATCH4-208ENST00000497287 KIF27Q86VH2 1401 aa11.95□□□□□ -0.5
GPATCH4-208ENST00000497287 CSRNP3Q8WYN3 585 aa11.95□□□□□ -0.5
GPATCH4-208ENST00000497287 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
GPATCH4-208ENST00000497287 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
GPATCH4-208ENST00000497287 ABCA10Q8WWZ4 1543 aa11.94□□□□□ -0.5
GPATCH4-208ENST00000497287 IFT140Q96RY7 1462 aa11.9□□□□□ -0.5
GPATCH4-208ENST00000497287 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
GPATCH4-208ENST00000497287 DNAJC5Q9H3Z4 198 aa11.88□□□□□ -0.51
GPATCH4-208ENST00000497287 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-208ENST00000497287 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
GPATCH4-208ENST00000497287 IGF1RP08069 1367 aa11.85□□□□□ -0.51
GPATCH4-208ENST00000497287 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
GPATCH4-208ENST00000497287 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
GPATCH4-208ENST00000497287 KIF21BO75037 1637 aa11.82□□□□□ -0.52
GPATCH4-208ENST00000497287 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
GPATCH4-208ENST00000497287 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
GPATCH4-208ENST00000497287 GOLGA3Q08378 1498 aa11.82□□□□□ -0.52
GPATCH4-208ENST00000497287 PRXQ9BXM0 1461 aa11.81□□□□□ -0.52
GPATCH4-208ENST00000497287 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
GPATCH4-208ENST00000497287 CARMIL1Q5VZK9 1371 aa11.8□□□□□ -0.52
GPATCH4-208ENST00000497287 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.524e-7■■■■□ 25.1
GPATCH4-208ENST00000497287 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
GPATCH4-208ENST00000497287 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
GPATCH4-208ENST00000497287 CUL7Q14999 1698 aa11.78□□□□□ -0.52
GPATCH4-208ENST00000497287 GRIN2BQ13224 1484 aa11.77□□□□□ -0.52
GPATCH4-208ENST00000497287 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
GPATCH4-208ENST00000497287 PBRM1Q86U86 1689 aa11.76□□□□□ -0.53
GPATCH4-208ENST00000497287 TNIKQ9UKE5 1360 aa11.76□□□□□ -0.53
GPATCH4-208ENST00000497287 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-208ENST00000497287 FHAD1B1AJZ9 1412 aa11.72□□□□□ -0.53
GPATCH4-208ENST00000497287 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
GPATCH4-208ENST00000497287 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
GPATCH4-208ENST00000497287 ADAMTS12P58397 1594 aa11.69□□□□□ -0.54
GPATCH4-208ENST00000497287 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
GPATCH4-208ENST00000497287 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
GPATCH4-208ENST00000497287 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
GPATCH4-208ENST00000497287 GRIN2AQ12879 1464 aa11.62□□□□□ -0.55
GPATCH4-208ENST00000497287 CLIP1P30622 1438 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms