RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
SCNM1-206ENST00000497147 ABCC9O60706 1549 aa22.85■■□□□ 1.25
SCNM1-206ENST00000497147 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.14
SCNM1-206ENST00000497147 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
SCNM1-206ENST00000497147 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
SCNM1-206ENST00000497147 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
SCNM1-206ENST00000497147 NACADO15069 1562 aa21.15■□□□□ 0.98
SCNM1-206ENST00000497147 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
SCNM1-206ENST00000497147 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
SCNM1-206ENST00000497147 BICRAQ9NZM4 1560 aa20.9■□□□□ 0.94
SCNM1-206ENST00000497147 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
SCNM1-206ENST00000497147 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
SCNM1-206ENST00000497147 DNAJC5Q9H3Z4 198 aa20.59■□□□□ 0.89
SCNM1-206ENST00000497147 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
SCNM1-206ENST00000497147 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
SCNM1-206ENST00000497147 EIF4G1Q04637 1599 aaKnown RBP20.4■□□□□ 0.86
SCNM1-206ENST00000497147 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
SCNM1-206ENST00000497147 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
SCNM1-206ENST00000497147 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
SCNM1-206ENST00000497147 CUX2O14529 1486 aa19.88■□□□□ 0.77
SCNM1-206ENST00000497147 ERCC6Q03468 1493 aa19.73■□□□□ 0.75
SCNM1-206ENST00000497147 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
SCNM1-206ENST00000497147 NESP48681 1621 aa19.5■□□□□ 0.71
SCNM1-206ENST00000497147 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
SCNM1-206ENST00000497147 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
SCNM1-206ENST00000497147 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
SCNM1-206ENST00000497147 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
SCNM1-206ENST00000497147 SMARCA2P51531 1590 aa19.31■□□□□ 0.68
SCNM1-206ENST00000497147 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
SCNM1-206ENST00000497147 BAZ1BQ9UIG0 1483 aaKnown RBP19.2■□□□□ 0.66
SCNM1-206ENST00000497147 LAMC3Q9Y6N6 1575 aa19.18■□□□□ 0.66
SCNM1-206ENST00000497147 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
SCNM1-206ENST00000497147 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
SCNM1-206ENST00000497147 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
SCNM1-206ENST00000497147 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
SCNM1-206ENST00000497147 MRC2Q9UBG0 1479 aa18.99■□□□□ 0.63
SCNM1-206ENST00000497147 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
SCNM1-206ENST00000497147 WDR62O43379 1518 aa18.96■□□□□ 0.63
SCNM1-206ENST00000497147 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
SCNM1-206ENST00000497147 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
SCNM1-206ENST00000497147 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
SCNM1-206ENST00000497147 FANCD2Q9BXW9 1451 aa18.74■□□□□ 0.59
SCNM1-206ENST00000497147 RIMBP3CA6NJZ7 1639 aa18.71■□□□□ 0.59
SCNM1-206ENST00000497147 RIMBP3BA6NNM3 1639 aa18.71■□□□□ 0.59
SCNM1-206ENST00000497147 RIMBP3Q9UFD9 1639 aa18.71■□□□□ 0.59
SCNM1-206ENST00000497147 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
SCNM1-206ENST00000497147 WIZO95785 1651 aa18.65■□□□□ 0.58
SCNM1-206ENST00000497147 CFTRP13569 1480 aa18.63■□□□□ 0.57
SCNM1-206ENST00000497147 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
SCNM1-206ENST00000497147 CYB5RLQ6IPT4 315 aa18.53■□□□□ 0.56
SCNM1-206ENST00000497147 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
SCNM1-206ENST00000497147 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
SCNM1-206ENST00000497147 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
SCNM1-206ENST00000497147 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
SCNM1-206ENST00000497147 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
SCNM1-206ENST00000497147 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
SCNM1-206ENST00000497147 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.52
SCNM1-206ENST00000497147 EIF4G3O43432 1585 aaKnown RBP18.33■□□□□ 0.52
SCNM1-206ENST00000497147 TOPBP1Q92547 1522 aa18.33■□□□□ 0.52
SCNM1-206ENST00000497147 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.52
SCNM1-206ENST00000497147 CHD1O14646 1710 aa18.28■□□□□ 0.52
SCNM1-206ENST00000497147 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
SCNM1-206ENST00000497147 FBLN2P98095 1184 aa18.25■□□□□ 0.51
SCNM1-206ENST00000497147 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
SCNM1-206ENST00000497147 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
SCNM1-206ENST00000497147 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
SCNM1-206ENST00000497147 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
SCNM1-206ENST00000497147 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
SCNM1-206ENST00000497147 CLASP1Q7Z460 1538 aa18.11■□□□□ 0.49
SCNM1-206ENST00000497147 RAD54L2Q9Y4B4 1467 aa18.08■□□□□ 0.49
SCNM1-206ENST00000497147 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.49
SCNM1-206ENST00000497147 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
SCNM1-206ENST00000497147 SOGA1O94964 1423 aa18.01■□□□□ 0.47
SCNM1-206ENST00000497147 CHMP7Q8WUX9 453 aaPredicted RBP18.01■□□□□ 0.47
SCNM1-206ENST00000497147 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
SCNM1-206ENST00000497147 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
SCNM1-206ENST00000497147 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
SCNM1-206ENST00000497147 SYNJ2O15056 1496 aa17.91■□□□□ 0.46
SCNM1-206ENST00000497147 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
SCNM1-206ENST00000497147 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
SCNM1-206ENST00000497147 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
SCNM1-206ENST00000497147 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.44
SCNM1-206ENST00000497147 CUX1P39880 1505 aa17.82■□□□□ 0.44
SCNM1-206ENST00000497147 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
SCNM1-206ENST00000497147 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
SCNM1-206ENST00000497147 ILDR1Q86SU0 546 aaPredicted RBP17.68■□□□□ 0.42
SCNM1-206ENST00000497147 ABCA5Q8WWZ7 1642 aa17.68■□□□□ 0.42
SCNM1-206ENST00000497147 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
SCNM1-206ENST00000497147 KIF13AQ9H1H9 1805 aa17.68■□□□□ 0.42
SCNM1-206ENST00000497147 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
SCNM1-206ENST00000497147 NUP160Q12769 1436 aa17.65■□□□□ 0.42
SCNM1-206ENST00000497147 KDM4FA0A1W2PPD8 638 aa17.64■□□□□ 0.41
SCNM1-206ENST00000497147 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
SCNM1-206ENST00000497147 FAM69CQ0P6D2 419 aa17.58■□□□□ 0.4
SCNM1-206ENST00000497147 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
SCNM1-206ENST00000497147 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
SCNM1-206ENST00000497147 PRG4Q92954 1404 aaPredicted RBP17.54■□□□□ 0.4
SCNM1-206ENST00000497147 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
SCNM1-206ENST00000497147 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
SCNM1-206ENST00000497147 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms