RNA–Protein interactions for RNA: ENST00000497061.1

C1S-217, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-217ENST00000497061 NISCHQ9Y2I1 1504 aa42.22■■■■■ 4.35
C1S-217ENST00000497061 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.59
C1S-217ENST00000497061 ABCC9O60706 1549 aa36.36■■■■□ 3.41
C1S-217ENST00000497061 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
C1S-217ENST00000497061 DCAF8L2P0C7V8 631 aa35.19■■■■□ 3.22
C1S-217ENST00000497061 NACADO15069 1562 aa35.11■■■■□ 3.21
C1S-217ENST00000497061 RB1CC1Q8TDY2 1594 aa35.09■■■■□ 3.21
C1S-217ENST00000497061 MYO15BQ96JP2 1530 aa34.95■■■■□ 3.19
C1S-217ENST00000497061 DCAF1Q9Y4B6 1507 aa34.92■■■■□ 3.18
C1S-217ENST00000497061 UNC13AQ9UPW8 1703 aa34.43■■■■□ 3.1
C1S-217ENST00000497061 SCRIBQ14160 1630 aa34.2■■■■□ 3.07
C1S-217ENST00000497061 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
C1S-217ENST00000497061 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
C1S-217ENST00000497061 SHROOM4Q9ULL8 1493 aa33.62■■■□□ 2.97
C1S-217ENST00000497061 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
C1S-217ENST00000497061 EIF4G1Q04637 1599 aaKnown RBP33.1■■■□□ 2.89
C1S-217ENST00000497061 CC2D2AQ9P2K1 1620 aa32.93■■■□□ 2.86
C1S-217ENST00000497061 CECR2Q9BXF3 1484 aa32.87■■■□□ 2.85
C1S-217ENST00000497061 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
C1S-217ENST00000497061 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.82
C1S-217ENST00000497061 MROH2BQ7Z745 1585 aa32.56■■■□□ 2.8
C1S-217ENST00000497061 ATAD2BQ9ULI0 1458 aa32.44■■■□□ 2.78
C1S-217ENST00000497061 SMARCA2P51531 1590 aa32.42■■■□□ 2.78
C1S-217ENST00000497061 PEG3Q9GZU2 1588 aa32.37■■■□□ 2.77
C1S-217ENST00000497061 NCAPD3P42695 1498 aa32.37■■■□□ 2.77
C1S-217ENST00000497061 WIZO95785 1651 aa32.27■■■□□ 2.76
C1S-217ENST00000497061 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.76
C1S-217ENST00000497061 HMGXB3Q12766 1538 aa32.25■■■□□ 2.75
C1S-217ENST00000497061 BAZ1BQ9UIG0 1483 aaKnown RBP32.2■■■□□ 2.75
C1S-217ENST00000497061 TOP2AP11388 1531 aaKnown RBP31.89■■■□□ 2.7
C1S-217ENST00000497061 SUPT5HO00267 1087 aaKnown RBP31.69■■■□□ 2.66
C1S-217ENST00000497061 NESP48681 1621 aa31.57■■■□□ 2.64
C1S-217ENST00000497061 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
C1S-217ENST00000497061 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.63
C1S-217ENST00000497061 CADPSQ9ULU8 1353 aa31.44■■■□□ 2.62
C1S-217ENST00000497061 CFTRP13569 1480 aa31.32■■■□□ 2.6
C1S-217ENST00000497061 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
C1S-217ENST00000497061 KIF21AQ7Z4S6 1674 aa31.26■■■□□ 2.6
C1S-217ENST00000497061 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
C1S-217ENST00000497061 PRDM2Q13029 1718 aa31.23■■■□□ 2.59
C1S-217ENST00000497061 FANCD2Q9BXW9 1451 aa31.1■■■□□ 2.57
C1S-217ENST00000497061 CEP164Q9UPV0 1460 aa31.03■■■□□ 2.56
C1S-217ENST00000497061 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
C1S-217ENST00000497061 MRC2Q9UBG0 1479 aa30.93■■■□□ 2.54
C1S-217ENST00000497061 CUX2O14529 1486 aa30.85■■■□□ 2.53
C1S-217ENST00000497061 WDR62O43379 1518 aa30.83■■■□□ 2.53
C1S-217ENST00000497061 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
C1S-217ENST00000497061 TOPBP1Q92547 1522 aa30.65■■■□□ 2.5
C1S-217ENST00000497061 DNMBPQ6XZF7 1577 aa30.64■■■□□ 2.5
C1S-217ENST00000497061 ABCC8Q09428 1581 aa30.63■■■□□ 2.49
C1S-217ENST00000497061 CUX1P39880 1505 aa30.52■■■□□ 2.48
C1S-217ENST00000497061 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
C1S-217ENST00000497061 POLA1P09884 1462 aaPredicted RBP30.39■■■□□ 2.46
C1S-217ENST00000497061 FGD5Q6ZNL6 1462 aa30.37■■■□□ 2.45
C1S-217ENST00000497061 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
C1S-217ENST00000497061 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
C1S-217ENST00000497061 IFT140Q96RY7 1462 aa30.36■■■□□ 2.45
C1S-217ENST00000497061 TOP2BQ02880 1626 aa30.35■■■□□ 2.45
C1S-217ENST00000497061 TARBP1Q13395 1621 aaKnown RBP30.32■■■□□ 2.44
C1S-217ENST00000497061 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
C1S-217ENST00000497061 SOGA1O94964 1423 aa30.28■■■□□ 2.44
C1S-217ENST00000497061 ZNF608Q9ULD9 1512 aaPredicted RBP30.23■■■□□ 2.43
C1S-217ENST00000497061 WDR97A6NE52 1622 aa30.16■■■□□ 2.42
C1S-217ENST00000497061 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
C1S-217ENST00000497061 AQRO60306 1485 aaKnown RBP eCLIP30.1■■■□□ 2.41
C1S-217ENST00000497061 TDRD9Q8NDG6 1382 aaKnown RBP30.08■■■□□ 2.41
C1S-217ENST00000497061 ABCA10Q8WWZ4 1543 aa30.07■■■□□ 2.4
C1S-217ENST00000497061 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
C1S-217ENST00000497061 PBRM1Q86U86 1689 aa29.94■■■□□ 2.38
C1S-217ENST00000497061 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
C1S-217ENST00000497061 TRIM41Q8WV44 630 aa29.89■■■□□ 2.38
C1S-217ENST00000497061 GRIN2BQ13224 1484 aa29.88■■■□□ 2.37
C1S-217ENST00000497061 SNAPC4Q5SXM2 1469 aa29.81■■■□□ 2.36
C1S-217ENST00000497061 CHD1O14646 1710 aa29.77■■■□□ 2.36
C1S-217ENST00000497061 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
C1S-217ENST00000497061 KIF27Q86VH2 1401 aa29.74■■■□□ 2.35
C1S-217ENST00000497061 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
C1S-217ENST00000497061 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
C1S-217ENST00000497061 FBLN2P98095 1184 aa29.68■■■□□ 2.34
C1S-217ENST00000497061 SYNJ2O15056 1496 aa29.66■■■□□ 2.34
C1S-217ENST00000497061 ADAMTS12P58397 1594 aa29.64■■■□□ 2.34
C1S-217ENST00000497061 OSCARQ8IYS5 282 aa29.63■■■□□ 2.33
C1S-217ENST00000497061 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
C1S-217ENST00000497061 RUSC2Q8N2Y8 1516 aa29.62■■■□□ 2.33
C1S-217ENST00000497061 IGF1RP08069 1367 aa29.6■■■□□ 2.33
C1S-217ENST00000497061 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
C1S-217ENST00000497061 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
C1S-217ENST00000497061 CUL7Q14999 1698 aa29.54■■■□□ 2.32
C1S-217ENST00000497061 GRIN2AQ12879 1464 aa29.5■■■□□ 2.31
C1S-217ENST00000497061 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
C1S-217ENST00000497061 CEP170Q5SW79 1584 aa29.39■■■□□ 2.29
C1S-217ENST00000497061 CLASP1Q7Z460 1538 aa29.38■■■□□ 2.29
C1S-217ENST00000497061 NUP160Q12769 1436 aa29.34■■■□□ 2.29
C1S-217ENST00000497061 EEA1Q15075 1411 aa29.34■■■□□ 2.29
C1S-217ENST00000497061 FAM9AQ8IZU1 332 aaPredicted RBP29.3■■■□□ 2.28
C1S-217ENST00000497061 CSRNP3Q8WYN3 585 aa29.3■■■□□ 2.28
C1S-217ENST00000497061 RAPGEF2Q9Y4G8 1499 aa29.29■■■□□ 2.28
C1S-217ENST00000497061 PRXQ9BXM0 1461 aa29.24■■■□□ 2.27
C1S-217ENST00000497061 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
C1S-217ENST00000497061 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms