RNA–Protein interactions for RNA: ENST00000497058.5

RWDD3-207, Transcript of RWD domain containing 3, humanhuman

TSL 2

Gene RWDD3, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RWDD3-207ENST00000497058 AEBP2Q6ZN18 517 aaPredicted RBP31.17■■■□□ 2.58
RWDD3-207ENST00000497058 CHIC1Q5VXU3 224 aa30.07■■■□□ 2.4
RWDD3-207ENST00000497058 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
RWDD3-207ENST00000497058 SENP3Q9H4L4 574 aaPredicted RBP26.57■■□□□ 1.84
RWDD3-207ENST00000497058 ABCC9O60706 1549 aa26.47■■□□□ 1.83
RWDD3-207ENST00000497058 PHF23Q9BUL5 403 aaPredicted RBP26.38■■□□□ 1.81
RWDD3-207ENST00000497058 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
RWDD3-207ENST00000497058 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
RWDD3-207ENST00000497058 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
RWDD3-207ENST00000497058 NACADO15069 1562 aa24.73■■□□□ 1.55
RWDD3-207ENST00000497058 FOXD1Q16676 465 aa24.68■■□□□ 1.54
RWDD3-207ENST00000497058 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
RWDD3-207ENST00000497058 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
RWDD3-207ENST00000497058 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
RWDD3-207ENST00000497058 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
RWDD3-207ENST00000497058 PLPPR3Q6T4P5 718 aa24.24■■□□□ 1.47
RWDD3-207ENST00000497058 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
RWDD3-207ENST00000497058 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
RWDD3-207ENST00000497058 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
RWDD3-207ENST00000497058 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
RWDD3-207ENST00000497058 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
RWDD3-207ENST00000497058 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
RWDD3-207ENST00000497058 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
RWDD3-207ENST00000497058 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
RWDD3-207ENST00000497058 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
RWDD3-207ENST00000497058 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
RWDD3-207ENST00000497058 ADRA2BP18089 450 aa23.35■■□□□ 1.33
RWDD3-207ENST00000497058 CUX2O14529 1486 aa23.3■■□□□ 1.32
RWDD3-207ENST00000497058 PIAS4Q8N2W9 510 aaPredicted RBP23.15■■□□□ 1.3
RWDD3-207ENST00000497058 MSH5O43196 834 aa22.97■■□□□ 1.27
RWDD3-207ENST00000497058 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
RWDD3-207ENST00000497058 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
RWDD3-207ENST00000497058 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
RWDD3-207ENST00000497058 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
RWDD3-207ENST00000497058 NESP48681 1621 aa22.54■■□□□ 1.2
RWDD3-207ENST00000497058 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
RWDD3-207ENST00000497058 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
RWDD3-207ENST00000497058 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
RWDD3-207ENST00000497058 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
RWDD3-207ENST00000497058 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
RWDD3-207ENST00000497058 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
RWDD3-207ENST00000497058 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
RWDD3-207ENST00000497058 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
RWDD3-207ENST00000497058 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
RWDD3-207ENST00000497058 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
RWDD3-207ENST00000497058 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
RWDD3-207ENST00000497058 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
RWDD3-207ENST00000497058 WDR62O43379 1518 aa22.11■■□□□ 1.13
RWDD3-207ENST00000497058 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
RWDD3-207ENST00000497058 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
RWDD3-207ENST00000497058 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
RWDD3-207ENST00000497058 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
RWDD3-207ENST00000497058 RIMBP3CA6NJZ7 1639 aa21.74■■□□□ 1.07
RWDD3-207ENST00000497058 RIMBP3BA6NNM3 1639 aa21.74■■□□□ 1.07
RWDD3-207ENST00000497058 RIMBP3Q9UFD9 1639 aa21.74■■□□□ 1.07
RWDD3-207ENST00000497058 CFTRP13569 1480 aa21.72■■□□□ 1.07
RWDD3-207ENST00000497058 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
RWDD3-207ENST00000497058 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
RWDD3-207ENST00000497058 POTEDQ86YR6 584 aa21.62■■□□□ 1.05
RWDD3-207ENST00000497058 WIZO95785 1651 aa21.54■■□□□ 1.04
RWDD3-207ENST00000497058 IFT140Q96RY7 1462 aa21.52■■□□□ 1.03
RWDD3-207ENST00000497058 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
RWDD3-207ENST00000497058 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
RWDD3-207ENST00000497058 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
RWDD3-207ENST00000497058 TRHP20396 242 aaPredicted RBP21.42■■□□□ 1.02
RWDD3-207ENST00000497058 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
RWDD3-207ENST00000497058 ARAP1Q96P48 1450 aa21.39■■□□□ 1.02
RWDD3-207ENST00000497058 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
RWDD3-207ENST00000497058 ABCC8Q09428 1581 aa21.32■■□□□ 1
RWDD3-207ENST00000497058 MAPK8IP2Q13387 824 aaPredicted RBP21.31■■□□□ 1
RWDD3-207ENST00000497058 TOPBP1Q92547 1522 aa21.29■■□□□ 1
RWDD3-207ENST00000497058 PPP4R3CPQ6ZMV5 832 aa21.29■■□□□ 1
RWDD3-207ENST00000497058 PRDM2Q13029 1718 aa21.28■■□□□ 1
RWDD3-207ENST00000497058 EIF4G3O43432 1585 aaKnown RBP21.27■□□□□ 0.99
RWDD3-207ENST00000497058 CHD1O14646 1710 aa21.18■□□□□ 0.98
RWDD3-207ENST00000497058 AQRO60306 1485 aaKnown RBP eCLIP21.17■□□□□ 0.986e-9■■■■■ 45.1
RWDD3-207ENST00000497058 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
RWDD3-207ENST00000497058 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
RWDD3-207ENST00000497058 DMRT2Q9Y5R5 561 aa21.14■□□□□ 0.97
RWDD3-207ENST00000497058 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
RWDD3-207ENST00000497058 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
RWDD3-207ENST00000497058 FBLN2P98095 1184 aa21.08■□□□□ 0.97
RWDD3-207ENST00000497058 POLA1P09884 1462 aaPredicted RBP21.03■□□□□ 0.96
RWDD3-207ENST00000497058 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
RWDD3-207ENST00000497058 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
RWDD3-207ENST00000497058 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
RWDD3-207ENST00000497058 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
RWDD3-207ENST00000497058 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
RWDD3-207ENST00000497058 SOGA1O94964 1423 aa20.93■□□□□ 0.94
RWDD3-207ENST00000497058 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
RWDD3-207ENST00000497058 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
RWDD3-207ENST00000497058 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
RWDD3-207ENST00000497058 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
RWDD3-207ENST00000497058 GRIN2BQ13224 1484 aa20.86■□□□□ 0.93
RWDD3-207ENST00000497058 CNKSR2Q8WXI2 1034 aa20.82■□□□□ 0.92
RWDD3-207ENST00000497058 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
RWDD3-207ENST00000497058 NCBP3Q53F19 620 aaKnown RBP20.64■□□□□ 0.89
RWDD3-207ENST00000497058 CUX1P39880 1505 aa20.63■□□□□ 0.89
RWDD3-207ENST00000497058 NUP160Q12769 1436 aa20.59■□□□□ 0.89
RWDD3-207ENST00000497058 ERCC6L2Q5T890 1561 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms