RNA–Protein interactions for RNA: ENST00000497057.1

PHLDA3-204, Transcript of pleckstrin homology like domain family A member 3, humanhuman

TSL 2

Gene PHLDA3, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-204ENST00000497057 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
PHLDA3-204ENST00000497057 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
PHLDA3-204ENST00000497057 ABCC9O60706 1549 aa31.96■■■□□ 2.71
PHLDA3-204ENST00000497057 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
PHLDA3-204ENST00000497057 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
PHLDA3-204ENST00000497057 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
PHLDA3-204ENST00000497057 NACADO15069 1562 aa31.09■■■□□ 2.57
PHLDA3-204ENST00000497057 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
PHLDA3-204ENST00000497057 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
PHLDA3-204ENST00000497057 SCRIBQ14160 1630 aa30.41■■■□□ 2.46
PHLDA3-204ENST00000497057 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
PHLDA3-204ENST00000497057 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.43
PHLDA3-204ENST00000497057 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
PHLDA3-204ENST00000497057 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
PHLDA3-204ENST00000497057 CECR2Q9BXF3 1484 aa29.25■■■□□ 2.27
PHLDA3-204ENST00000497057 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
PHLDA3-204ENST00000497057 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
PHLDA3-204ENST00000497057 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
PHLDA3-204ENST00000497057 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
PHLDA3-204ENST00000497057 CC2D2AQ9P2K1 1620 aa28.92■■■□□ 2.22
PHLDA3-204ENST00000497057 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
PHLDA3-204ENST00000497057 SMARCA2P51531 1590 aa28.81■■■□□ 2.2
PHLDA3-204ENST00000497057 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
PHLDA3-204ENST00000497057 WIZO95785 1651 aa28.77■■■□□ 2.2
PHLDA3-204ENST00000497057 PEG3Q9GZU2 1588 aa28.77■■■□□ 2.2
PHLDA3-204ENST00000497057 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
PHLDA3-204ENST00000497057 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
PHLDA3-204ENST00000497057 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
PHLDA3-204ENST00000497057 BAZ1BQ9UIG0 1483 aaKnown RBP28.63■■■□□ 2.17
PHLDA3-204ENST00000497057 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
PHLDA3-204ENST00000497057 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
PHLDA3-204ENST00000497057 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
PHLDA3-204ENST00000497057 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
PHLDA3-204ENST00000497057 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
PHLDA3-204ENST00000497057 CFTRP13569 1480 aa27.83■■■□□ 2.04
PHLDA3-204ENST00000497057 NESP48681 1621 aa27.81■■■□□ 2.04
PHLDA3-204ENST00000497057 PRDM2Q13029 1718 aa27.7■■■□□ 2.03
PHLDA3-204ENST00000497057 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
PHLDA3-204ENST00000497057 FANCD2Q9BXW9 1451 aa27.58■■■□□ 2.01
PHLDA3-204ENST00000497057 ERCC6Q03468 1493 aa27.56■■■□□ 2
PHLDA3-204ENST00000497057 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
PHLDA3-204ENST00000497057 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
PHLDA3-204ENST00000497057 ABCC8Q09428 1581 aa27.34■■□□□ 1.97
PHLDA3-204ENST00000497057 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
PHLDA3-204ENST00000497057 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
PHLDA3-204ENST00000497057 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
PHLDA3-204ENST00000497057 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
PHLDA3-204ENST00000497057 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
PHLDA3-204ENST00000497057 CUX1P39880 1505 aa27.21■■□□□ 1.95
PHLDA3-204ENST00000497057 TOPBP1Q92547 1522 aa27.2■■□□□ 1.94
PHLDA3-204ENST00000497057 WDR62O43379 1518 aa27.19■■□□□ 1.94
PHLDA3-204ENST00000497057 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
PHLDA3-204ENST00000497057 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
PHLDA3-204ENST00000497057 BIVM-ERCC5R4GMW8 1640 aa27.13■■□□□ 1.93
PHLDA3-204ENST00000497057 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
PHLDA3-204ENST00000497057 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
PHLDA3-204ENST00000497057 FGD5Q6ZNL6 1462 aa27.04■■□□□ 1.92
PHLDA3-204ENST00000497057 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
PHLDA3-204ENST00000497057 CUX2O14529 1486 aa26.97■■□□□ 1.91
PHLDA3-204ENST00000497057 SOGA1O94964 1423 aa26.92■■□□□ 1.9
PHLDA3-204ENST00000497057 IFT140Q96RY7 1462 aa26.89■■□□□ 1.9
PHLDA3-204ENST00000497057 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
PHLDA3-204ENST00000497057 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
PHLDA3-204ENST00000497057 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
PHLDA3-204ENST00000497057 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
PHLDA3-204ENST00000497057 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
PHLDA3-204ENST00000497057 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
PHLDA3-204ENST00000497057 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
PHLDA3-204ENST00000497057 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.86
PHLDA3-204ENST00000497057 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.85
PHLDA3-204ENST00000497057 ABCA5Q8WWZ7 1642 aa26.63■■□□□ 1.85
PHLDA3-204ENST00000497057 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
PHLDA3-204ENST00000497057 EEA1Q15075 1411 aa26.58■■□□□ 1.85
PHLDA3-204ENST00000497057 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
PHLDA3-204ENST00000497057 FAM9AQ8IZU1 332 aaPredicted RBP26.56■■□□□ 1.84
PHLDA3-204ENST00000497057 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
PHLDA3-204ENST00000497057 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
PHLDA3-204ENST00000497057 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
PHLDA3-204ENST00000497057 CSRNP3Q8WYN3 585 aa26.45■■□□□ 1.82
PHLDA3-204ENST00000497057 IGF1RP08069 1367 aa26.45■■□□□ 1.82
PHLDA3-204ENST00000497057 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
PHLDA3-204ENST00000497057 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
PHLDA3-204ENST00000497057 CUL7Q14999 1698 aa26.4■■□□□ 1.82
PHLDA3-204ENST00000497057 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
PHLDA3-204ENST00000497057 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
PHLDA3-204ENST00000497057 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.81
PHLDA3-204ENST00000497057 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
PHLDA3-204ENST00000497057 FBLN2P98095 1184 aa26.28■■□□□ 1.8
PHLDA3-204ENST00000497057 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
PHLDA3-204ENST00000497057 PRXQ9BXM0 1461 aa26.28■■□□□ 1.8
PHLDA3-204ENST00000497057 RAPGEF2Q9Y4G8 1499 aa26.26■■□□□ 1.79
PHLDA3-204ENST00000497057 KIF21BO75037 1637 aa26.25■■□□□ 1.79
PHLDA3-204ENST00000497057 CHD1O14646 1710 aa26.19■■□□□ 1.78
PHLDA3-204ENST00000497057 GRIN2AQ12879 1464 aa26.19■■□□□ 1.78
PHLDA3-204ENST00000497057 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
PHLDA3-204ENST00000497057 GOLGA3Q08378 1498 aa26.17■■□□□ 1.78
PHLDA3-204ENST00000497057 UBTFP17480 764 aaKnown RBP26.09■■□□□ 1.77
PHLDA3-204ENST00000497057 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
PHLDA3-204ENST00000497057 NUP160Q12769 1436 aa26.02■■□□□ 1.76
PHLDA3-204ENST00000497057 CEP170Q5SW79 1584 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms