RNA–Protein interactions for RNA: ENST00000497048.5

KLF4-205, Transcript of Kruppel like factor 4, humanhuman

TSL 2

Gene KLF4, Length 2,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-205ENST00000497048 NISCHQ9Y2I1 1504 aa37.62■■■■□ 3.61
KLF4-205ENST00000497048 CCDC180Q9P1Z9 1646 aa33.03■■■□□ 2.88
KLF4-205ENST00000497048 ABCC9O60706 1549 aa31.63■■■□□ 2.65
KLF4-205ENST00000497048 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
KLF4-205ENST00000497048 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
KLF4-205ENST00000497048 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
KLF4-205ENST00000497048 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
KLF4-205ENST00000497048 NACADO15069 1562 aa30.84■■■□□ 2.53
KLF4-205ENST00000497048 RB1CC1Q8TDY2 1594 aa30.7■■■□□ 2.5
KLF4-205ENST00000497048 SHROOM4Q9ULL8 1493 aa30.47■■■□□ 2.47
KLF4-205ENST00000497048 SCRIBQ14160 1630 aa30.34■■■□□ 2.45
KLF4-205ENST00000497048 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
KLF4-205ENST00000497048 BICRAQ9NZM4 1560 aa29.79■■■□□ 2.36
KLF4-205ENST00000497048 PABPN1Q86U42 306 aaKnown RBP eCLIP29.73■■■□□ 2.35
KLF4-205ENST00000497048 SUPT5HO00267 1087 aaKnown RBP29.33■■■□□ 2.29
KLF4-205ENST00000497048 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
KLF4-205ENST00000497048 BAZ1AQ9NRL2 1556 aaPredicted RBP29.1■■■□□ 2.25
KLF4-205ENST00000497048 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
KLF4-205ENST00000497048 SMARCA4P51532 1647 aa29.03■■■□□ 2.24
KLF4-205ENST00000497048 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.23
KLF4-205ENST00000497048 EIF4G1Q04637 1599 aaKnown RBP28.93■■■□□ 2.22
KLF4-205ENST00000497048 WIZO95785 1651 aa28.82■■■□□ 2.2
KLF4-205ENST00000497048 PEG3Q9GZU2 1588 aa28.68■■■□□ 2.18
KLF4-205ENST00000497048 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
KLF4-205ENST00000497048 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
KLF4-205ENST00000497048 CC2D2AQ9P2K1 1620 aa28.62■■■□□ 2.17
KLF4-205ENST00000497048 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
KLF4-205ENST00000497048 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
KLF4-205ENST00000497048 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
KLF4-205ENST00000497048 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
KLF4-205ENST00000497048 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
KLF4-205ENST00000497048 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
KLF4-205ENST00000497048 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
KLF4-205ENST00000497048 CFTRP13569 1480 aa27.72■■■□□ 2.03
KLF4-205ENST00000497048 CADPSQ9ULU8 1353 aa27.7■■■□□ 2.03
KLF4-205ENST00000497048 HRCP23327 699 aa27.7■■■□□ 2.03
KLF4-205ENST00000497048 NESP48681 1621 aa27.64■■■□□ 2.02
KLF4-205ENST00000497048 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
KLF4-205ENST00000497048 LAMC3Q9Y6N6 1575 aa27.59■■■□□ 2.01
KLF4-205ENST00000497048 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
KLF4-205ENST00000497048 ABCC8Q09428 1581 aa27.49■■□□□ 1.99
KLF4-205ENST00000497048 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
KLF4-205ENST00000497048 PDS5BQ9NTI5 1447 aa27.37■■□□□ 1.97
KLF4-205ENST00000497048 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
KLF4-205ENST00000497048 KIF21AQ7Z4S6 1674 aa27.32■■□□□ 1.96
KLF4-205ENST00000497048 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
KLF4-205ENST00000497048 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
KLF4-205ENST00000497048 PPARGC1BQ86YN6 1023 aaKnown RBP27.26■■□□□ 1.95
KLF4-205ENST00000497048 CUX1P39880 1505 aa27.2■■□□□ 1.95
KLF4-205ENST00000497048 TOP2BQ02880 1626 aa27.17■■□□□ 1.94
KLF4-205ENST00000497048 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
KLF4-205ENST00000497048 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
KLF4-205ENST00000497048 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
KLF4-205ENST00000497048 FAM9AQ8IZU1 332 aaPredicted RBP27.11■■□□□ 1.93
KLF4-205ENST00000497048 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
KLF4-205ENST00000497048 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
KLF4-205ENST00000497048 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
KLF4-205ENST00000497048 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
KLF4-205ENST00000497048 PELP1Q8IZL8 1130 aaKnown RBP27.06■■□□□ 1.92
KLF4-205ENST00000497048 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
KLF4-205ENST00000497048 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
KLF4-205ENST00000497048 THOC2Q8NI27 1593 aaKnown RBP26.98■■□□□ 1.91
KLF4-205ENST00000497048 WDR62O43379 1518 aa26.95■■□□□ 1.9
KLF4-205ENST00000497048 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
KLF4-205ENST00000497048 SOGA1O94964 1423 aa26.87■■□□□ 1.89
KLF4-205ENST00000497048 RAD54L2Q9Y4B4 1467 aa26.82■■□□□ 1.88
KLF4-205ENST00000497048 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
KLF4-205ENST00000497048 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
KLF4-205ENST00000497048 CUX2O14529 1486 aa26.75■■□□□ 1.87
KLF4-205ENST00000497048 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
KLF4-205ENST00000497048 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
KLF4-205ENST00000497048 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
KLF4-205ENST00000497048 EEA1Q15075 1411 aa26.7■■□□□ 1.86
KLF4-205ENST00000497048 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
KLF4-205ENST00000497048 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
KLF4-205ENST00000497048 CSRNP3Q8WYN3 585 aa26.61■■□□□ 1.85
KLF4-205ENST00000497048 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
KLF4-205ENST00000497048 ABCA5Q8WWZ7 1642 aa26.56■■□□□ 1.84
KLF4-205ENST00000497048 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
KLF4-205ENST00000497048 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
KLF4-205ENST00000497048 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.83
KLF4-205ENST00000497048 SCAF1Q9H7N4 1312 aaKnown RBP26.47■■□□□ 1.83
KLF4-205ENST00000497048 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
KLF4-205ENST00000497048 IGF1RP08069 1367 aa26.46■■□□□ 1.83
KLF4-205ENST00000497048 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
KLF4-205ENST00000497048 KIF21BO75037 1637 aa26.41■■□□□ 1.82
KLF4-205ENST00000497048 GOLGA3Q08378 1498 aa26.41■■□□□ 1.82
KLF4-205ENST00000497048 ERICH3Q5RHP9 1530 aa26.4■■□□□ 1.82
KLF4-205ENST00000497048 PRXQ9BXM0 1461 aa26.38■■□□□ 1.81
KLF4-205ENST00000497048 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
KLF4-205ENST00000497048 RAPGEF2Q9Y4G8 1499 aa26.33■■□□□ 1.81
KLF4-205ENST00000497048 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.81
KLF4-205ENST00000497048 CUL7Q14999 1698 aa26.33■■□□□ 1.81
KLF4-205ENST00000497048 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.81
KLF4-205ENST00000497048 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
KLF4-205ENST00000497048 CEP162Q5TB80 1403 aa26.26■■□□□ 1.8
KLF4-205ENST00000497048 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
KLF4-205ENST00000497048 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
KLF4-205ENST00000497048 FHAD1B1AJZ9 1412 aa26.2■■□□□ 1.79
KLF4-205ENST00000497048 MAGI1Q96QZ7 1491 aaPredicted RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms