RNA–Protein interactions for RNA: ENST00000497037.5

ANKRD28-212, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 3,509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-212ENST00000497037 NISCHQ9Y2I1 1504 aa11.06□□□□□ -0.64
ANKRD28-212ENST00000497037 CCDC180Q9P1Z9 1646 aa9.63□□□□□ -0.87
ANKRD28-212ENST00000497037 ZCCHC6Q5VYS8 1495 aaKnown RBP9.32□□□□□ -0.92
ANKRD28-212ENST00000497037 SHROOM4Q9ULL8 1493 aa9.11□□□□□ -0.95
ANKRD28-212ENST00000497037 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
ANKRD28-212ENST00000497037 ABCC9O60706 1549 aa9.04□□□□□ -0.96
ANKRD28-212ENST00000497037 DCAF8L2P0C7V8 631 aa9.01□□□□□ -0.97
ANKRD28-212ENST00000497037 MYO15BQ96JP2 1530 aa8.93□□□□□ -0.98
ANKRD28-212ENST00000497037 SCRIBQ14160 1630 aa8.92□□□□□ -0.98
ANKRD28-212ENST00000497037 NACADO15069 1562 aa8.88□□□□□ -0.99
ANKRD28-212ENST00000497037 UNC13AQ9UPW8 1703 aa8.86□□□□□ -0.99
ANKRD28-212ENST00000497037 RB1CC1Q8TDY2 1594 aa8.8□□□□□ -1
ANKRD28-212ENST00000497037 SUPT5HO00267 1087 aaKnown RBP8.71□□□□□ -1.01
ANKRD28-212ENST00000497037 BICRAQ9NZM4 1560 aa8.68□□□□□ -1.02
ANKRD28-212ENST00000497037 CECR2Q9BXF3 1484 aa8.66□□□□□ -1.02
ANKRD28-212ENST00000497037 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
ANKRD28-212ENST00000497037 MROH2BQ7Z745 1585 aa8.61□□□□□ -1.03
ANKRD28-212ENST00000497037 WIZO95785 1651 aa8.59□□□□□ -1.03
ANKRD28-212ENST00000497037 SMARCA4P51532 1647 aa8.53□□□□□ -1.04
ANKRD28-212ENST00000497037 PABPN1Q86U42 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
ANKRD28-212ENST00000497037 BAZ1AQ9NRL2 1556 aaPredicted RBP8.49□□□□□ -1.05
ANKRD28-212ENST00000497037 EIF4G1Q04637 1599 aaKnown RBP8.42□□□□□ -1.06
ANKRD28-212ENST00000497037 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
ANKRD28-212ENST00000497037 CHIC1Q5VXU3 224 aa8.4□□□□□ -1.06
ANKRD28-212ENST00000497037 PEG3Q9GZU2 1588 aa8.39□□□□□ -1.07
ANKRD28-212ENST00000497037 SMARCA2P51531 1590 aa8.38□□□□□ -1.07
ANKRD28-212ENST00000497037 CCDC88BA6NC98 1476 aa8.33□□□□□ -1.08
ANKRD28-212ENST00000497037 ATAD2BQ9ULI0 1458 aa8.32□□□□□ -1.08
ANKRD28-212ENST00000497037 ABCC8Q09428 1581 aa8.25□□□□□ -1.09
ANKRD28-212ENST00000497037 BAZ1BQ9UIG0 1483 aaKnown RBP8.24□□□□□ -1.09
ANKRD28-212ENST00000497037 HMGXB3Q12766 1538 aa8.22□□□□□ -1.09
ANKRD28-212ENST00000497037 CC2D2AQ9P2K1 1620 aa8.22□□□□□ -1.09
ANKRD28-212ENST00000497037 NCAPD3P42695 1498 aa8.2□□□□□ -1.1
ANKRD28-212ENST00000497037 SYNJ1O43426 1573 aa8.15□□□□□ -1.11
ANKRD28-212ENST00000497037 PRDM2Q13029 1718 aa8.14□□□□□ -1.11
ANKRD28-212ENST00000497037 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
ANKRD28-212ENST00000497037 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
ANKRD28-212ENST00000497037 RUSC2Q8N2Y8 1516 aa8.08□□□□□ -1.12
ANKRD28-212ENST00000497037 DNAJC5BQ9UF47 199 aa8.08□□□□□ -1.12
ANKRD28-212ENST00000497037 BIVM-ERCC5R4GMW8 1640 aa8.07□□□□□ -1.12
ANKRD28-212ENST00000497037 FAM9AQ8IZU1 332 aaPredicted RBP8.06□□□□□ -1.12
ANKRD28-212ENST00000497037 CFTRP13569 1480 aa8.06□□□□□ -1.12
ANKRD28-212ENST00000497037 SOGA1O94964 1423 aa8.06□□□□□ -1.12
ANKRD28-212ENST00000497037 WRNQ14191 1432 aaPredicted RBP eCLIP8.05□□□□□ -1.12
ANKRD28-212ENST00000497037 TOP2BQ02880 1626 aa8.05□□□□□ -1.12
ANKRD28-212ENST00000497037 CUX1P39880 1505 aa8.04□□□□□ -1.12
ANKRD28-212ENST00000497037 NESP48681 1621 aa8.02□□□□□ -1.13
ANKRD28-212ENST00000497037 EHMT2Q96KQ7 1210 aa8□□□□□ -1.13
ANKRD28-212ENST00000497037 CADPSQ9ULU8 1353 aa7.97□□□□□ -1.13
ANKRD28-212ENST00000497037 KIF21AQ7Z4S6 1674 aa7.97□□□□□ -1.13
ANKRD28-212ENST00000497037 LAMC3Q9Y6N6 1575 aa7.93□□□□□ -1.14
ANKRD28-212ENST00000497037 FANCD2Q9BXW9 1451 aa7.93□□□□□ -1.14
ANKRD28-212ENST00000497037 KIF21BO75037 1637 aa7.92□□□□□ -1.14
ANKRD28-212ENST00000497037 WDR97A6NE52 1622 aa7.9□□□□□ -1.14
ANKRD28-212ENST00000497037 FGD5Q6ZNL6 1462 aa7.89□□□□□ -1.15
ANKRD28-212ENST00000497037 URB2Q14146 1524 aaKnown RBP7.89□□□□□ -1.15
ANKRD28-212ENST00000497037 DNMBPQ6XZF7 1577 aa7.89□□□□□ -1.15
ANKRD28-212ENST00000497037 EEA1Q15075 1411 aa7.88□□□□□ -1.15
ANKRD28-212ENST00000497037 RAPGEF2Q9Y4G8 1499 aa7.88□□□□□ -1.15
ANKRD28-212ENST00000497037 TOPBP1Q92547 1522 aa7.87□□□□□ -1.15
ANKRD28-212ENST00000497037 CSRNP3Q8WYN3 585 aa7.87□□□□□ -1.15
ANKRD28-212ENST00000497037 RAD54L2Q9Y4B4 1467 aa7.85□□□□□ -1.15
ANKRD28-212ENST00000497037 GOLGA3Q08378 1498 aa7.85□□□□□ -1.15
ANKRD28-212ENST00000497037 POLA1P09884 1462 aaPredicted RBP7.85□□□□□ -1.15
ANKRD28-212ENST00000497037 CEP164Q9UPV0 1460 aa7.84□□□□□ -1.15
ANKRD28-212ENST00000497037 PRXQ9BXM0 1461 aa7.84□□□□□ -1.15
ANKRD28-212ENST00000497037 CEP162Q5TB80 1403 aa7.84□□□□□ -1.15
ANKRD28-212ENST00000497037 TNIKQ9UKE5 1360 aa7.83□□□□□ -1.16
ANKRD28-212ENST00000497037 CUX2O14529 1486 aa7.82□□□□□ -1.16
ANKRD28-212ENST00000497037 TARBP1Q13395 1621 aaKnown RBP7.82□□□□□ -1.16
ANKRD28-212ENST00000497037 ERICH3Q5RHP9 1530 aa7.81□□□□□ -1.16
ANKRD28-212ENST00000497037 ABCA5Q8WWZ7 1642 aa7.81□□□□□ -1.16
ANKRD28-212ENST00000497037 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
ANKRD28-212ENST00000497037 KIF27Q86VH2 1401 aa7.79□□□□□ -1.16
ANKRD28-212ENST00000497037 AEBP2Q6ZN18 517 aaPredicted RBP7.79□□□□□ -1.16
ANKRD28-212ENST00000497037 THOC2Q8NI27 1593 aaKnown RBP7.78□□□□□ -1.16
ANKRD28-212ENST00000497037 IGF1RP08069 1367 aa7.78□□□□□ -1.16
ANKRD28-212ENST00000497037 PDS5BQ9NTI5 1447 aa7.78□□□□□ -1.16
ANKRD28-212ENST00000497037 PBRM1Q86U86 1689 aa7.77□□□□□ -1.17
ANKRD28-212ENST00000497037 PPARGC1BQ86YN6 1023 aaKnown RBP7.76□□□□□ -1.17
ANKRD28-212ENST00000497037 PCGF6Q9BYE7 350 aa7.76□□□□□ -1.17
ANKRD28-212ENST00000497037 WDR62O43379 1518 aa7.75□□□□□ -1.17
ANKRD28-212ENST00000497037 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
ANKRD28-212ENST00000497037 ARAP1Q96P48 1450 aa7.75□□□□□ -1.17
ANKRD28-212ENST00000497037 MRC2Q9UBG0 1479 aa7.75□□□□□ -1.17
ANKRD28-212ENST00000497037 CTTNBP2Q8WZ74 1663 aa7.74□□□□□ -1.17
ANKRD28-212ENST00000497037 CUL7Q14999 1698 aa7.73□□□□□ -1.17
ANKRD28-212ENST00000497037 CLIP1P30622 1438 aa7.73□□□□□ -1.17
ANKRD28-212ENST00000497037 TDRD9Q8NDG6 1382 aaKnown RBP7.71□□□□□ -1.17
ANKRD28-212ENST00000497037 ZNF608Q9ULD9 1512 aaPredicted RBP7.71□□□□□ -1.18
ANKRD28-212ENST00000497037 ARHGAP35Q9NRY4 1499 aa7.71□□□□□ -1.18
ANKRD28-212ENST00000497037 CARMIL1Q5VZK9 1371 aa7.7□□□□□ -1.18
ANKRD28-212ENST00000497037 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
ANKRD28-212ENST00000497037 GAPVD1Q14C86 1478 aa7.69□□□□□ -1.18
ANKRD28-212ENST00000497037 EIF4G3O43432 1585 aaKnown RBP7.69□□□□□ -1.18
ANKRD28-212ENST00000497037 AQRO60306 1485 aaKnown RBP eCLIP7.68□□□□□ -1.185e-7■■■■■ 27.6
ANKRD28-212ENST00000497037 LRRIQ1Q96JM4 1722 aa7.68□□□□□ -1.18
ANKRD28-212ENST00000497037 ADAMTS12P58397 1594 aa7.68□□□□□ -1.18
ANKRD28-212ENST00000497037 VPS8Q8N3P4 1428 aa7.68□□□□□ -1.18
ANKRD28-212ENST00000497037 TRIM26Q12899 539 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms