RNA–Protein interactions for RNA: ENST00000496962.1

GGCX-210, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 684 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-210ENST00000496962 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
GGCX-210ENST00000496962 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.95
GGCX-210ENST00000496962 ABCC9O60706 1549 aa26.15■■□□□ 1.78
GGCX-210ENST00000496962 ZCCHC6Q5VYS8 1495 aaKnown RBP25.74■■□□□ 1.71
GGCX-210ENST00000496962 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
GGCX-210ENST00000496962 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
GGCX-210ENST00000496962 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
GGCX-210ENST00000496962 NACADO15069 1562 aa25.52■■□□□ 1.68
GGCX-210ENST00000496962 RB1CC1Q8TDY2 1594 aa25.43■■□□□ 1.66
GGCX-210ENST00000496962 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
GGCX-210ENST00000496962 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
GGCX-210ENST00000496962 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
GGCX-210ENST00000496962 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
GGCX-210ENST00000496962 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
GGCX-210ENST00000496962 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
GGCX-210ENST00000496962 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
GGCX-210ENST00000496962 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
GGCX-210ENST00000496962 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
GGCX-210ENST00000496962 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
GGCX-210ENST00000496962 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
GGCX-210ENST00000496962 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
GGCX-210ENST00000496962 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
GGCX-210ENST00000496962 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
GGCX-210ENST00000496962 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
GGCX-210ENST00000496962 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
GGCX-210ENST00000496962 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
GGCX-210ENST00000496962 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
GGCX-210ENST00000496962 WIZO95785 1651 aa23.44■■□□□ 1.34
GGCX-210ENST00000496962 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
GGCX-210ENST00000496962 BAZ1BQ9UIG0 1483 aaKnown RBP23.42■■□□□ 1.34
GGCX-210ENST00000496962 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
GGCX-210ENST00000496962 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
GGCX-210ENST00000496962 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
GGCX-210ENST00000496962 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
GGCX-210ENST00000496962 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
GGCX-210ENST00000496962 CFTRP13569 1480 aa22.81■■□□□ 1.24
GGCX-210ENST00000496962 NESP48681 1621 aa22.72■■□□□ 1.23
GGCX-210ENST00000496962 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
GGCX-210ENST00000496962 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
GGCX-210ENST00000496962 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
GGCX-210ENST00000496962 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
GGCX-210ENST00000496962 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
GGCX-210ENST00000496962 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
GGCX-210ENST00000496962 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
GGCX-210ENST00000496962 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
GGCX-210ENST00000496962 ABCC8Q09428 1581 aa22.39■■□□□ 1.18
GGCX-210ENST00000496962 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
GGCX-210ENST00000496962 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
GGCX-210ENST00000496962 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
GGCX-210ENST00000496962 WDR62O43379 1518 aa22.28■■□□□ 1.16
GGCX-210ENST00000496962 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
GGCX-210ENST00000496962 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
GGCX-210ENST00000496962 CUX1P39880 1505 aa22.21■■□□□ 1.15
GGCX-210ENST00000496962 CUX2O14529 1486 aa22.21■■□□□ 1.15
GGCX-210ENST00000496962 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
GGCX-210ENST00000496962 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
GGCX-210ENST00000496962 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
GGCX-210ENST00000496962 TRIM41Q8WV44 630 aa22.1■■□□□ 1.13
GGCX-210ENST00000496962 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
GGCX-210ENST00000496962 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
GGCX-210ENST00000496962 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
GGCX-210ENST00000496962 SOGA1O94964 1423 aa22.06■■□□□ 1.12
GGCX-210ENST00000496962 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
GGCX-210ENST00000496962 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
GGCX-210ENST00000496962 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
GGCX-210ENST00000496962 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
GGCX-210ENST00000496962 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
GGCX-210ENST00000496962 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
GGCX-210ENST00000496962 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
GGCX-210ENST00000496962 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
GGCX-210ENST00000496962 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
GGCX-210ENST00000496962 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
GGCX-210ENST00000496962 EEA1Q15075 1411 aa21.76■■□□□ 1.07
GGCX-210ENST00000496962 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
GGCX-210ENST00000496962 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
GGCX-210ENST00000496962 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.07
GGCX-210ENST00000496962 IGF1RP08069 1367 aa21.66■■□□□ 1.06
GGCX-210ENST00000496962 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
GGCX-210ENST00000496962 PBRM1Q86U86 1689 aa21.64■■□□□ 1.05
GGCX-210ENST00000496962 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
GGCX-210ENST00000496962 RUSC2Q8N2Y8 1516 aa21.63■■□□□ 1.05
GGCX-210ENST00000496962 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
GGCX-210ENST00000496962 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
GGCX-210ENST00000496962 CUL7Q14999 1698 aa21.57■■□□□ 1.04
GGCX-210ENST00000496962 CARMIL1Q5VZK9 1371 aa21.56■■□□□ 1.04
GGCX-210ENST00000496962 CHMP7Q8WUX9 453 aaPredicted RBP21.55■■□□□ 1.04
GGCX-210ENST00000496962 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
GGCX-210ENST00000496962 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
GGCX-210ENST00000496962 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
GGCX-210ENST00000496962 FBLN2P98095 1184 aa21.49■■□□□ 1.03
GGCX-210ENST00000496962 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
GGCX-210ENST00000496962 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
GGCX-210ENST00000496962 GRIN2AQ12879 1464 aa21.44■■□□□ 1.02
GGCX-210ENST00000496962 OSCARQ8IYS5 282 aa21.4■■□□□ 1.02
GGCX-210ENST00000496962 KIF21BO75037 1637 aa21.4■■□□□ 1.02
GGCX-210ENST00000496962 CHD1O14646 1710 aa21.38■■□□□ 1.01
GGCX-210ENST00000496962 NUP160Q12769 1436 aa21.34■■□□□ 1.01
GGCX-210ENST00000496962 GOLGA3Q08378 1498 aa21.33■■□□□ 1.01
GGCX-210ENST00000496962 KIAA0586Q9BVV6 1533 aa21.27■■□□□ 1
GGCX-210ENST00000496962 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
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