RNA–Protein interactions for RNA: ENST00000496408.1

SHISA5-217, Transcript of shisa family member 5, humanhuman

TSL 4

Gene SHISA5, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-217ENST00000496408 NISCHQ9Y2I1 1504 aa42.4■■■■■ 4.38
SHISA5-217ENST00000496408 CCDC180Q9P1Z9 1646 aa37.69■■■■□ 3.62
SHISA5-217ENST00000496408 ABCC9O60706 1549 aa36.69■■■■□ 3.46
SHISA5-217ENST00000496408 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
SHISA5-217ENST00000496408 RB1CC1Q8TDY2 1594 aa35.38■■■■□ 3.25
SHISA5-217ENST00000496408 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
SHISA5-217ENST00000496408 NACADO15069 1562 aa35.34■■■■□ 3.25
SHISA5-217ENST00000496408 MYO15BQ96JP2 1530 aa35.12■■■■□ 3.21
SHISA5-217ENST00000496408 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
SHISA5-217ENST00000496408 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
SHISA5-217ENST00000496408 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
SHISA5-217ENST00000496408 PABPN1Q86U42 306 aaKnown RBP eCLIP34.27■■■■□ 3.08
SHISA5-217ENST00000496408 BICRAQ9NZM4 1560 aa34.25■■■■□ 3.07
SHISA5-217ENST00000496408 SHROOM4Q9ULL8 1493 aa33.91■■■■□ 3.02
SHISA5-217ENST00000496408 DNAJC5BQ9UF47 199 aa33.39■■■□□ 2.94
SHISA5-217ENST00000496408 EIF4G1Q04637 1599 aaKnown RBP33.36■■■□□ 2.93
SHISA5-217ENST00000496408 CC2D2AQ9P2K1 1620 aa33.19■■■□□ 2.9
SHISA5-217ENST00000496408 CECR2Q9BXF3 1484 aa33■■■□□ 2.87
SHISA5-217ENST00000496408 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
SHISA5-217ENST00000496408 BAZ1AQ9NRL2 1556 aaPredicted RBP32.88■■■□□ 2.85
SHISA5-217ENST00000496408 MROH2BQ7Z745 1585 aa32.69■■■□□ 2.82
SHISA5-217ENST00000496408 SMARCA2P51531 1590 aa32.65■■■□□ 2.82
SHISA5-217ENST00000496408 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
SHISA5-217ENST00000496408 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
SHISA5-217ENST00000496408 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
SHISA5-217ENST00000496408 HMGXB3Q12766 1538 aa32.48■■■□□ 2.79
SHISA5-217ENST00000496408 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
SHISA5-217ENST00000496408 WIZO95785 1651 aa32.39■■■□□ 2.78
SHISA5-217ENST00000496408 RSF1Q96T23 1441 aaPredicted RBP32.34■■■□□ 2.77
SHISA5-217ENST00000496408 TOP2AP11388 1531 aaKnown RBP32.05■■■□□ 2.72
SHISA5-217ENST00000496408 NESP48681 1621 aa31.78■■■□□ 2.68
SHISA5-217ENST00000496408 LAMC3Q9Y6N6 1575 aa31.74■■■□□ 2.67
SHISA5-217ENST00000496408 SUPT5HO00267 1087 aaKnown RBP31.72■■■□□ 2.67
SHISA5-217ENST00000496408 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
SHISA5-217ENST00000496408 CADPSQ9ULU8 1353 aa31.63■■■□□ 2.65
SHISA5-217ENST00000496408 CCDC88BA6NC98 1476 aa31.62■■■□□ 2.65
SHISA5-217ENST00000496408 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
SHISA5-217ENST00000496408 KIF21AQ7Z4S6 1674 aa31.48■■■□□ 2.63
SHISA5-217ENST00000496408 CFTRP13569 1480 aa31.48■■■□□ 2.63
SHISA5-217ENST00000496408 PRDM2Q13029 1718 aa31.39■■■□□ 2.62
SHISA5-217ENST00000496408 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
SHISA5-217ENST00000496408 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
SHISA5-217ENST00000496408 CEP164Q9UPV0 1460 aa31.29■■■□□ 2.6
SHISA5-217ENST00000496408 MRC2Q9UBG0 1479 aa31.2■■■□□ 2.58
SHISA5-217ENST00000496408 CUX2O14529 1486 aa31.19■■■□□ 2.58
SHISA5-217ENST00000496408 WDR62O43379 1518 aa31.07■■■□□ 2.56
SHISA5-217ENST00000496408 URB2Q14146 1524 aaKnown RBP30.99■■■□□ 2.55
SHISA5-217ENST00000496408 DNMBPQ6XZF7 1577 aa30.84■■■□□ 2.53
SHISA5-217ENST00000496408 TOPBP1Q92547 1522 aa30.83■■■□□ 2.53
SHISA5-217ENST00000496408 ABCC8Q09428 1581 aa30.82■■■□□ 2.52
SHISA5-217ENST00000496408 CUX1P39880 1505 aa30.68■■■□□ 2.5
SHISA5-217ENST00000496408 IFT140Q96RY7 1462 aa30.59■■■□□ 2.49
SHISA5-217ENST00000496408 POLA1P09884 1462 aaPredicted RBP30.58■■■□□ 2.49
SHISA5-217ENST00000496408 FGD5Q6ZNL6 1462 aa30.56■■■□□ 2.48
SHISA5-217ENST00000496408 WRNQ14191 1432 aaPredicted RBP eCLIP30.54■■■□□ 2.48
SHISA5-217ENST00000496408 TARBP1Q13395 1621 aaKnown RBP30.48■■■□□ 2.47
SHISA5-217ENST00000496408 BIVM-ERCC5R4GMW8 1640 aa30.48■■■□□ 2.47
SHISA5-217ENST00000496408 SYNJ1O43426 1573 aa30.48■■■□□ 2.47
SHISA5-217ENST00000496408 TOP2BQ02880 1626 aa30.47■■■□□ 2.47
SHISA5-217ENST00000496408 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
SHISA5-217ENST00000496408 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
SHISA5-217ENST00000496408 SOGA1O94964 1423 aa30.44■■■□□ 2.46
SHISA5-217ENST00000496408 EIF4G3O43432 1585 aaKnown RBP30.39■■■□□ 2.46
SHISA5-217ENST00000496408 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
SHISA5-217ENST00000496408 AQRO60306 1485 aaKnown RBP eCLIP30.28■■■□□ 2.44
SHISA5-217ENST00000496408 TDRD9Q8NDG6 1382 aaKnown RBP30.26■■■□□ 2.43
SHISA5-217ENST00000496408 ABCA10Q8WWZ4 1543 aa30.23■■■□□ 2.43
SHISA5-217ENST00000496408 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.41
SHISA5-217ENST00000496408 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
SHISA5-217ENST00000496408 DNAJC5Q9H3Z4 198 aa30.12■■■□□ 2.41
SHISA5-217ENST00000496408 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
SHISA5-217ENST00000496408 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
SHISA5-217ENST00000496408 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
SHISA5-217ENST00000496408 CHD1O14646 1710 aa30■■■□□ 2.39
SHISA5-217ENST00000496408 MAGI1Q96QZ7 1491 aaPredicted RBP29.99■■■□□ 2.39
SHISA5-217ENST00000496408 FBLN2P98095 1184 aa29.93■■■□□ 2.38
SHISA5-217ENST00000496408 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
SHISA5-217ENST00000496408 ERICH3Q5RHP9 1530 aa29.9■■■□□ 2.38
SHISA5-217ENST00000496408 OSCARQ8IYS5 282 aa29.89■■■□□ 2.38
SHISA5-217ENST00000496408 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
SHISA5-217ENST00000496408 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
SHISA5-217ENST00000496408 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
SHISA5-217ENST00000496408 CHMP7Q8WUX9 453 aaPredicted RBP29.84■■■□□ 2.37
SHISA5-217ENST00000496408 FHAD1B1AJZ9 1412 aa29.77■■■□□ 2.36
SHISA5-217ENST00000496408 GRIN2AQ12879 1464 aa29.71■■■□□ 2.35
SHISA5-217ENST00000496408 CUL7Q14999 1698 aa29.71■■■□□ 2.35
SHISA5-217ENST00000496408 IGF1RP08069 1367 aa29.67■■■□□ 2.34
SHISA5-217ENST00000496408 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.34
SHISA5-217ENST00000496408 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
SHISA5-217ENST00000496408 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
SHISA5-217ENST00000496408 CEP170Q5SW79 1584 aa29.56■■■□□ 2.32
SHISA5-217ENST00000496408 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
SHISA5-217ENST00000496408 NUP160Q12769 1436 aa29.54■■■□□ 2.32
SHISA5-217ENST00000496408 RIMBP3CA6NJZ7 1639 aa29.47■■■□□ 2.31
SHISA5-217ENST00000496408 RIMBP3BA6NNM3 1639 aa29.47■■■□□ 2.31
SHISA5-217ENST00000496408 RIMBP3Q9UFD9 1639 aa29.47■■■□□ 2.31
SHISA5-217ENST00000496408 ARHGEF11O15085 1522 aa29.46■■■□□ 2.31
SHISA5-217ENST00000496408 EEA1Q15075 1411 aa29.42■■■□□ 2.3
SHISA5-217ENST00000496408 RAPGEF2Q9Y4G8 1499 aa29.42■■■□□ 2.3
SHISA5-217ENST00000496408 FAM9AQ8IZU1 332 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms