RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, humanhuman

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-223ENST00000496393 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
NVL-223ENST00000496393 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
NVL-223ENST00000496393 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
NVL-223ENST00000496393 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
NVL-223ENST00000496393 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
NVL-223ENST00000496393 ABCC9O60706 1549 aa18.34■□□□□ 0.53
NVL-223ENST00000496393 FOXD1Q16676 465 aa18.04■□□□□ 0.48
NVL-223ENST00000496393 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
NVL-223ENST00000496393 DNAJC5BQ9UF47 199 aa17.39■□□□□ 0.37
NVL-223ENST00000496393 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
NVL-223ENST00000496393 NACADO15069 1562 aa17.09■□□□□ 0.33
NVL-223ENST00000496393 DCAF8L2P0C7V8 631 aa17.04■□□□□ 0.32
NVL-223ENST00000496393 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
NVL-223ENST00000496393 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
NVL-223ENST00000496393 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
NVL-223ENST00000496393 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
NVL-223ENST00000496393 MSH5O43196 834 aa16.82■□□□□ 0.28
NVL-223ENST00000496393 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
NVL-223ENST00000496393 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
NVL-223ENST00000496393 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
NVL-223ENST00000496393 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
NVL-223ENST00000496393 ADRA2BP18089 450 aa16.7■□□□□ 0.26
NVL-223ENST00000496393 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
NVL-223ENST00000496393 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
NVL-223ENST00000496393 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
NVL-223ENST00000496393 SCRIBQ14160 1630 aa16.52■□□□□ 0.23
NVL-223ENST00000496393 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
NVL-223ENST00000496393 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
NVL-223ENST00000496393 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
NVL-223ENST00000496393 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
NVL-223ENST00000496393 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
NVL-223ENST00000496393 CUX2O14529 1486 aa15.83■□□□□ 0.12
NVL-223ENST00000496393 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
NVL-223ENST00000496393 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
NVL-223ENST00000496393 NESP48681 1621 aa15.69■□□□□ 0.1
NVL-223ENST00000496393 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
NVL-223ENST00000496393 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
NVL-223ENST00000496393 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
NVL-223ENST00000496393 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
NVL-223ENST00000496393 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
NVL-223ENST00000496393 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
NVL-223ENST00000496393 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
NVL-223ENST00000496393 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
NVL-223ENST00000496393 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
NVL-223ENST00000496393 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
NVL-223ENST00000496393 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
NVL-223ENST00000496393 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
NVL-223ENST00000496393 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
NVL-223ENST00000496393 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
NVL-223ENST00000496393 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
NVL-223ENST00000496393 WDR62O43379 1518 aa15.27■□□□□ 0.04
NVL-223ENST00000496393 WIZO95785 1651 aa15.26■□□□□ 0.03
NVL-223ENST00000496393 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
NVL-223ENST00000496393 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
NVL-223ENST00000496393 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
NVL-223ENST00000496393 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
NVL-223ENST00000496393 CFTRP13569 1480 aa15.08■□□□□ 0
NVL-223ENST00000496393 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
NVL-223ENST00000496393 OSCARQ8IYS5 282 aa15.05■□□□□ -0
NVL-223ENST00000496393 TOP2AP11388 1531 aaKnown RBP15.02■□□□□ -0
NVL-223ENST00000496393 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
NVL-223ENST00000496393 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.01
NVL-223ENST00000496393 RIMBP3BA6NNM3 1639 aa14.96□□□□□ -0.01
NVL-223ENST00000496393 RIMBP3Q9UFD9 1639 aa14.96□□□□□ -0.01
NVL-223ENST00000496393 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
NVL-223ENST00000496393 ZNF608Q9ULD9 1512 aaPredicted RBP14.93□□□□□ -0.02
NVL-223ENST00000496393 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
NVL-223ENST00000496393 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
NVL-223ENST00000496393 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
NVL-223ENST00000496393 TOPBP1Q92547 1522 aa14.85□□□□□ -0.03
NVL-223ENST00000496393 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
NVL-223ENST00000496393 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
NVL-223ENST00000496393 CHD1O14646 1710 aa14.78□□□□□ -0.04
NVL-223ENST00000496393 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
NVL-223ENST00000496393 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.05
NVL-223ENST00000496393 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
NVL-223ENST00000496393 TARBP1Q13395 1621 aaKnown RBP14.73□□□□□ -0.05
NVL-223ENST00000496393 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
NVL-223ENST00000496393 ARAP1Q96P48 1450 aa14.72□□□□□ -0.05
NVL-223ENST00000496393 FBLN2P98095 1184 aa14.72□□□□□ -0.05
NVL-223ENST00000496393 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
NVL-223ENST00000496393 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
NVL-223ENST00000496393 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
NVL-223ENST00000496393 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
NVL-223ENST00000496393 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
NVL-223ENST00000496393 TDRD9Q8NDG6 1382 aaKnown RBP14.62□□□□□ -0.07
NVL-223ENST00000496393 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
NVL-223ENST00000496393 SOGA1O94964 1423 aa14.59□□□□□ -0.07
NVL-223ENST00000496393 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
NVL-223ENST00000496393 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
NVL-223ENST00000496393 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
NVL-223ENST00000496393 SYNJ1O43426 1573 aa14.54□□□□□ -0.08
NVL-223ENST00000496393 CHMP7Q8WUX9 453 aaPredicted RBP14.53□□□□□ -0.08
NVL-223ENST00000496393 CUX1P39880 1505 aa14.52□□□□□ -0.08
NVL-223ENST00000496393 MAGI1Q96QZ7 1491 aaPredicted RBP14.51□□□□□ -0.09
NVL-223ENST00000496393 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
NVL-223ENST00000496393 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
NVL-223ENST00000496393 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
NVL-223ENST00000496393 PBRM1Q86U86 1689 aa14.47□□□□□ -0.09
NVL-223ENST00000496393 SYNJ2O15056 1496 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms