RNA–Protein interactions for RNA: ENST00000496372.1

CNIH3-212, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 2

Gene CNIH3, Length 451 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-212ENST00000496372 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
CNIH3-212ENST00000496372 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
CNIH3-212ENST00000496372 ABCC9O60706 1549 aa16.3■□□□□ 0.2
CNIH3-212ENST00000496372 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
CNIH3-212ENST00000496372 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
CNIH3-212ENST00000496372 NACADO15069 1562 aa15.75■□□□□ 0.11
CNIH3-212ENST00000496372 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
CNIH3-212ENST00000496372 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
CNIH3-212ENST00000496372 DCAF1Q9Y4B6 1507 aa15.65■□□□□ 0.1
CNIH3-212ENST00000496372 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
CNIH3-212ENST00000496372 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
CNIH3-212ENST00000496372 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
CNIH3-212ENST00000496372 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
CNIH3-212ENST00000496372 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
CNIH3-212ENST00000496372 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
CNIH3-212ENST00000496372 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
CNIH3-212ENST00000496372 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.04
CNIH3-212ENST00000496372 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
CNIH3-212ENST00000496372 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
CNIH3-212ENST00000496372 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
CNIH3-212ENST00000496372 MROH2BQ7Z745 1585 aa14.59□□□□□ -0.07
CNIH3-212ENST00000496372 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
CNIH3-212ENST00000496372 ATAD2BQ9ULI0 1458 aa14.54□□□□□ -0.08
CNIH3-212ENST00000496372 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
CNIH3-212ENST00000496372 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
CNIH3-212ENST00000496372 WIZO95785 1651 aa14.47□□□□□ -0.09
CNIH3-212ENST00000496372 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
CNIH3-212ENST00000496372 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
CNIH3-212ENST00000496372 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
CNIH3-212ENST00000496372 TOP2AP11388 1531 aaKnown RBP14.3□□□□□ -0.12
CNIH3-212ENST00000496372 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
CNIH3-212ENST00000496372 NESP48681 1621 aa14.15□□□□□ -0.14
CNIH3-212ENST00000496372 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
CNIH3-212ENST00000496372 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
CNIH3-212ENST00000496372 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
CNIH3-212ENST00000496372 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
CNIH3-212ENST00000496372 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
CNIH3-212ENST00000496372 CFTRP13569 1480 aa14.04□□□□□ -0.16
CNIH3-212ENST00000496372 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
CNIH3-212ENST00000496372 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
CNIH3-212ENST00000496372 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
CNIH3-212ENST00000496372 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
CNIH3-212ENST00000496372 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
CNIH3-212ENST00000496372 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
CNIH3-212ENST00000496372 CUX2O14529 1486 aa13.84□□□□□ -0.19
CNIH3-212ENST00000496372 WDR62O43379 1518 aa13.82□□□□□ -0.2
CNIH3-212ENST00000496372 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
CNIH3-212ENST00000496372 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
CNIH3-212ENST00000496372 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
CNIH3-212ENST00000496372 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
CNIH3-212ENST00000496372 CUX1P39880 1505 aa13.69□□□□□ -0.22
CNIH3-212ENST00000496372 WRNQ14191 1432 aaPredicted RBP eCLIP13.63□□□□□ -0.23
CNIH3-212ENST00000496372 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
CNIH3-212ENST00000496372 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
CNIH3-212ENST00000496372 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
CNIH3-212ENST00000496372 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
CNIH3-212ENST00000496372 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
CNIH3-212ENST00000496372 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
CNIH3-212ENST00000496372 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
CNIH3-212ENST00000496372 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
CNIH3-212ENST00000496372 SOGA1O94964 1423 aa13.56□□□□□ -0.24
CNIH3-212ENST00000496372 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
CNIH3-212ENST00000496372 WDR97A6NE52 1622 aa13.54□□□□□ -0.24
CNIH3-212ENST00000496372 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
CNIH3-212ENST00000496372 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
CNIH3-212ENST00000496372 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
CNIH3-212ENST00000496372 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
CNIH3-212ENST00000496372 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
CNIH3-212ENST00000496372 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
CNIH3-212ENST00000496372 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
CNIH3-212ENST00000496372 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
CNIH3-212ENST00000496372 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
CNIH3-212ENST00000496372 CHD1O14646 1710 aa13.37□□□□□ -0.27
CNIH3-212ENST00000496372 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
CNIH3-212ENST00000496372 MAGI1Q96QZ7 1491 aaPredicted RBP13.35□□□□□ -0.27
CNIH3-212ENST00000496372 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
CNIH3-212ENST00000496372 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
CNIH3-212ENST00000496372 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
CNIH3-212ENST00000496372 FBLN2P98095 1184 aa13.3□□□□□ -0.28
CNIH3-212ENST00000496372 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
CNIH3-212ENST00000496372 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
CNIH3-212ENST00000496372 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
CNIH3-212ENST00000496372 CHMP7Q8WUX9 453 aaPredicted RBP13.27□□□□□ -0.29
CNIH3-212ENST00000496372 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
CNIH3-212ENST00000496372 CUL7Q14999 1698 aa13.26□□□□□ -0.29
CNIH3-212ENST00000496372 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
CNIH3-212ENST00000496372 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
CNIH3-212ENST00000496372 IGF1RP08069 1367 aa13.25□□□□□ -0.29
CNIH3-212ENST00000496372 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
CNIH3-212ENST00000496372 CARMIL1Q5VZK9 1371 aa13.19□□□□□ -0.3
CNIH3-212ENST00000496372 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
CNIH3-212ENST00000496372 CEP170Q5SW79 1584 aa13.17□□□□□ -0.3
CNIH3-212ENST00000496372 NUP160Q12769 1436 aa13.15□□□□□ -0.3
CNIH3-212ENST00000496372 EEA1Q15075 1411 aa13.14□□□□□ -0.31
CNIH3-212ENST00000496372 RAPGEF2Q9Y4G8 1499 aa13.12□□□□□ -0.31
CNIH3-212ENST00000496372 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
CNIH3-212ENST00000496372 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
CNIH3-212ENST00000496372 PRXQ9BXM0 1461 aa13.1□□□□□ -0.31
CNIH3-212ENST00000496372 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
CNIH3-212ENST00000496372 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms