RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
ERGIC3-219ENST00000496172 ABCC9O60706 1549 aa23.84■■□□□ 1.41
ERGIC3-219ENST00000496172 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
ERGIC3-219ENST00000496172 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
ERGIC3-219ENST00000496172 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
ERGIC3-219ENST00000496172 NACADO15069 1562 aa22.33■■□□□ 1.16
ERGIC3-219ENST00000496172 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
ERGIC3-219ENST00000496172 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.12
ERGIC3-219ENST00000496172 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
ERGIC3-219ENST00000496172 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
ERGIC3-219ENST00000496172 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
ERGIC3-219ENST00000496172 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
ERGIC3-219ENST00000496172 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
ERGIC3-219ENST00000496172 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
ERGIC3-219ENST00000496172 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
ERGIC3-219ENST00000496172 DCAF1Q9Y4B6 1507 aa21.42■■□□□ 1.02
ERGIC3-219ENST00000496172 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
ERGIC3-219ENST00000496172 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1.01
ERGIC3-219ENST00000496172 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
ERGIC3-219ENST00000496172 CUX2O14529 1486 aa20.91■□□□□ 0.94
ERGIC3-219ENST00000496172 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
ERGIC3-219ENST00000496172 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
ERGIC3-219ENST00000496172 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
ERGIC3-219ENST00000496172 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
ERGIC3-219ENST00000496172 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
ERGIC3-219ENST00000496172 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
ERGIC3-219ENST00000496172 NESP48681 1621 aa20.35■□□□□ 0.85
ERGIC3-219ENST00000496172 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
ERGIC3-219ENST00000496172 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
ERGIC3-219ENST00000496172 PEG3Q9GZU2 1588 aa20.18■□□□□ 0.82
ERGIC3-219ENST00000496172 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
ERGIC3-219ENST00000496172 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
ERGIC3-219ENST00000496172 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
ERGIC3-219ENST00000496172 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
ERGIC3-219ENST00000496172 PDS5BQ9NTI5 1447 aa20.07■□□□□ 0.8
ERGIC3-219ENST00000496172 WDR62O43379 1518 aa19.97■□□□□ 0.79
ERGIC3-219ENST00000496172 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
ERGIC3-219ENST00000496172 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
ERGIC3-219ENST00000496172 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
ERGIC3-219ENST00000496172 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
ERGIC3-219ENST00000496172 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
ERGIC3-219ENST00000496172 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
ERGIC3-219ENST00000496172 RIMBP3CA6NJZ7 1639 aa19.63■□□□□ 0.73
ERGIC3-219ENST00000496172 RIMBP3BA6NNM3 1639 aa19.63■□□□□ 0.73
ERGIC3-219ENST00000496172 RIMBP3Q9UFD9 1639 aa19.63■□□□□ 0.73
ERGIC3-219ENST00000496172 CFTRP13569 1480 aa19.6■□□□□ 0.73
ERGIC3-219ENST00000496172 WIZO95785 1651 aa19.59■□□□□ 0.73
ERGIC3-219ENST00000496172 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
ERGIC3-219ENST00000496172 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
ERGIC3-219ENST00000496172 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
ERGIC3-219ENST00000496172 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
ERGIC3-219ENST00000496172 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
ERGIC3-219ENST00000496172 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
ERGIC3-219ENST00000496172 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
ERGIC3-219ENST00000496172 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
ERGIC3-219ENST00000496172 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
ERGIC3-219ENST00000496172 CHD1O14646 1710 aa19.25■□□□□ 0.67
ERGIC3-219ENST00000496172 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
ERGIC3-219ENST00000496172 CYB5RLQ6IPT4 315 aa19.23■□□□□ 0.67
ERGIC3-219ENST00000496172 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
ERGIC3-219ENST00000496172 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
ERGIC3-219ENST00000496172 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
ERGIC3-219ENST00000496172 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
ERGIC3-219ENST00000496172 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
ERGIC3-219ENST00000496172 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.647e-8■■■■□ 21.8
ERGIC3-219ENST00000496172 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
ERGIC3-219ENST00000496172 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
ERGIC3-219ENST00000496172 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.63
ERGIC3-219ENST00000496172 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
ERGIC3-219ENST00000496172 SYNJ1O43426 1573 aa18.97■□□□□ 0.63
ERGIC3-219ENST00000496172 FBLN2P98095 1184 aa18.94■□□□□ 0.62
ERGIC3-219ENST00000496172 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
ERGIC3-219ENST00000496172 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
ERGIC3-219ENST00000496172 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
ERGIC3-219ENST00000496172 SOGA1O94964 1423 aa18.85■□□□□ 0.61
ERGIC3-219ENST00000496172 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
ERGIC3-219ENST00000496172 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
ERGIC3-219ENST00000496172 SYNJ2O15056 1496 aa18.83■□□□□ 0.6
ERGIC3-219ENST00000496172 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
ERGIC3-219ENST00000496172 GAPVD1Q14C86 1478 aa18.81■□□□□ 0.6
ERGIC3-219ENST00000496172 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
ERGIC3-219ENST00000496172 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
ERGIC3-219ENST00000496172 PBRM1Q86U86 1689 aa18.75■□□□□ 0.59
ERGIC3-219ENST00000496172 CUX1P39880 1505 aa18.7■□□□□ 0.58
ERGIC3-219ENST00000496172 ABCA5Q8WWZ7 1642 aa18.66■□□□□ 0.58
ERGIC3-219ENST00000496172 ERCC6L2Q5T890 1561 aa18.63■□□□□ 0.57
ERGIC3-219ENST00000496172 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
ERGIC3-219ENST00000496172 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
ERGIC3-219ENST00000496172 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
ERGIC3-219ENST00000496172 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
ERGIC3-219ENST00000496172 GRIN2AQ12879 1464 aa18.58■□□□□ 0.57
ERGIC3-219ENST00000496172 NUP160Q12769 1436 aa18.57■□□□□ 0.56
ERGIC3-219ENST00000496172 ADAMTS12P58397 1594 aa18.54■□□□□ 0.56
ERGIC3-219ENST00000496172 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
ERGIC3-219ENST00000496172 MAPKBP1O60336 1514 aa18.42■□□□□ 0.54
ERGIC3-219ENST00000496172 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
ERGIC3-219ENST00000496172 DIP2BQ9P265 1576 aa18.38■□□□□ 0.53
ERGIC3-219ENST00000496172 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
ERGIC3-219ENST00000496172 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
ERGIC3-219ENST00000496172 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms