RNA–Protein interactions for RNA: ENST00000495768.1

CLDN12-212, Transcript of claudin 12, humanhuman

TSL 2

Gene CLDN12, Length 674 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-212ENST00000495768 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
CLDN12-212ENST00000495768 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
CLDN12-212ENST00000495768 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
CLDN12-212ENST00000495768 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
CLDN12-212ENST00000495768 ABCC9O60706 1549 aa26.04■■□□□ 1.76
CLDN12-212ENST00000495768 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
CLDN12-212ENST00000495768 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
CLDN12-212ENST00000495768 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
CLDN12-212ENST00000495768 NACADO15069 1562 aa24.95■■□□□ 1.58
CLDN12-212ENST00000495768 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
CLDN12-212ENST00000495768 MYO15BQ96JP2 1530 aa24.8■■□□□ 1.56
CLDN12-212ENST00000495768 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
CLDN12-212ENST00000495768 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
CLDN12-212ENST00000495768 PABPN1Q86U42 306 aaKnown RBP eCLIP24.41■■□□□ 1.5
CLDN12-212ENST00000495768 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.5
CLDN12-212ENST00000495768 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
CLDN12-212ENST00000495768 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
CLDN12-212ENST00000495768 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
CLDN12-212ENST00000495768 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
CLDN12-212ENST00000495768 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
CLDN12-212ENST00000495768 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
CLDN12-212ENST00000495768 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
CLDN12-212ENST00000495768 FOXD1Q16676 465 aa23.24■■□□□ 1.31
CLDN12-212ENST00000495768 SMARCA4P51532 1647 aa23.21■■□□□ 1.31
CLDN12-212ENST00000495768 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
CLDN12-212ENST00000495768 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
CLDN12-212ENST00000495768 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
CLDN12-212ENST00000495768 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
CLDN12-212ENST00000495768 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
CLDN12-212ENST00000495768 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
CLDN12-212ENST00000495768 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
CLDN12-212ENST00000495768 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
CLDN12-212ENST00000495768 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
CLDN12-212ENST00000495768 WIZO95785 1651 aa22.86■■□□□ 1.25
CLDN12-212ENST00000495768 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
CLDN12-212ENST00000495768 NESP48681 1621 aa22.57■■□□□ 1.2
CLDN12-212ENST00000495768 CADPSQ9ULU8 1353 aa22.42■■□□□ 1.18
CLDN12-212ENST00000495768 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
CLDN12-212ENST00000495768 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
CLDN12-212ENST00000495768 ERCC6Q03468 1493 aa22.39■■□□□ 1.17
CLDN12-212ENST00000495768 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
CLDN12-212ENST00000495768 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
CLDN12-212ENST00000495768 CFTRP13569 1480 aa22.28■■□□□ 1.16
CLDN12-212ENST00000495768 PDS5BQ9NTI5 1447 aa22.28■■□□□ 1.16
CLDN12-212ENST00000495768 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
CLDN12-212ENST00000495768 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
CLDN12-212ENST00000495768 THOC2Q8NI27 1593 aaKnown RBP22.13■■□□□ 1.13
CLDN12-212ENST00000495768 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
CLDN12-212ENST00000495768 CUX2O14529 1486 aa22.09■■□□□ 1.13
CLDN12-212ENST00000495768 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
CLDN12-212ENST00000495768 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
CLDN12-212ENST00000495768 WDR62O43379 1518 aa21.98■■□□□ 1.11
CLDN12-212ENST00000495768 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
CLDN12-212ENST00000495768 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
CLDN12-212ENST00000495768 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
CLDN12-212ENST00000495768 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
CLDN12-212ENST00000495768 ADRA2BP18089 450 aa21.75■■□□□ 1.07
CLDN12-212ENST00000495768 PIAS4Q8N2W9 510 aaPredicted RBP21.74■■□□□ 1.07
CLDN12-212ENST00000495768 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
CLDN12-212ENST00000495768 MSH5O43196 834 aa21.68■■□□□ 1.06
CLDN12-212ENST00000495768 CUX1P39880 1505 aa21.68■■□□□ 1.06
CLDN12-212ENST00000495768 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
CLDN12-212ENST00000495768 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
CLDN12-212ENST00000495768 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
CLDN12-212ENST00000495768 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
CLDN12-212ENST00000495768 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
CLDN12-212ENST00000495768 SOGA1O94964 1423 aa21.55■■□□□ 1.04
CLDN12-212ENST00000495768 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
CLDN12-212ENST00000495768 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
CLDN12-212ENST00000495768 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
CLDN12-212ENST00000495768 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
CLDN12-212ENST00000495768 TDRD9Q8NDG6 1382 aaKnown RBP21.47■■□□□ 1.03
CLDN12-212ENST00000495768 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
CLDN12-212ENST00000495768 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
CLDN12-212ENST00000495768 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
CLDN12-212ENST00000495768 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
CLDN12-212ENST00000495768 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
CLDN12-212ENST00000495768 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
CLDN12-212ENST00000495768 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
CLDN12-212ENST00000495768 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
CLDN12-212ENST00000495768 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
CLDN12-212ENST00000495768 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
CLDN12-212ENST00000495768 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
CLDN12-212ENST00000495768 FBLN2P98095 1184 aa21.23■□□□□ 0.99
CLDN12-212ENST00000495768 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
CLDN12-212ENST00000495768 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
CLDN12-212ENST00000495768 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
CLDN12-212ENST00000495768 CHD1O14646 1710 aa21.14■□□□□ 0.97
CLDN12-212ENST00000495768 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
CLDN12-212ENST00000495768 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
CLDN12-212ENST00000495768 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
CLDN12-212ENST00000495768 ERICH3Q5RHP9 1530 aa21.08■□□□□ 0.96
CLDN12-212ENST00000495768 IGF1RP08069 1367 aa21.05■□□□□ 0.96
CLDN12-212ENST00000495768 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
CLDN12-212ENST00000495768 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
CLDN12-212ENST00000495768 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
CLDN12-212ENST00000495768 GRIN2AQ12879 1464 aa21■□□□□ 0.95
CLDN12-212ENST00000495768 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
CLDN12-212ENST00000495768 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
CLDN12-212ENST00000495768 NUP160Q12769 1436 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms