RNA–Protein interactions for RNA: ENST00000495627.1

GMPPB-205, Transcript of GDP-mannose pyrophosphorylase B, humanhuman

TSL 2

Gene GMPPB, Length 711 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPB-205ENST00000495627 NISCHQ9Y2I1 1504 aa46■■■■■ 4.95
GMPPB-205ENST00000495627 CCDC180Q9P1Z9 1646 aa40.8■■■■■ 4.12
GMPPB-205ENST00000495627 ABCC9O60706 1549 aa39.71■■■■□ 3.95
GMPPB-205ENST00000495627 DCAF8L2P0C7V8 631 aa38.47■■■■□ 3.75
GMPPB-205ENST00000495627 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
GMPPB-205ENST00000495627 NACADO15069 1562 aa38.32■■■■□ 3.73
GMPPB-205ENST00000495627 RB1CC1Q8TDY2 1594 aa38.32■■■■□ 3.73
GMPPB-205ENST00000495627 MYO15BQ96JP2 1530 aa38.13■■■■□ 3.69
GMPPB-205ENST00000495627 DCAF1Q9Y4B6 1507 aa38.06■■■■□ 3.68
GMPPB-205ENST00000495627 DNAJC5BQ9UF47 199 aa37.77■■■■□ 3.64
GMPPB-205ENST00000495627 UNC13AQ9UPW8 1703 aa37.37■■■■□ 3.57
GMPPB-205ENST00000495627 SCRIBQ14160 1630 aa37.26■■■■□ 3.56
GMPPB-205ENST00000495627 PABPN1Q86U42 306 aaKnown RBP eCLIP37.16■■■■□ 3.54
GMPPB-205ENST00000495627 BICRAQ9NZM4 1560 aa37.05■■■■□ 3.52
GMPPB-205ENST00000495627 SHROOM4Q9ULL8 1493 aa36.77■■■■□ 3.48
GMPPB-205ENST00000495627 EIF4G1Q04637 1599 aaKnown RBP36.12■■■■□ 3.37
GMPPB-205ENST00000495627 CC2D2AQ9P2K1 1620 aa35.91■■■■□ 3.34
GMPPB-205ENST00000495627 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
GMPPB-205ENST00000495627 BAZ1AQ9NRL2 1556 aaPredicted RBP35.67■■■■□ 3.3
GMPPB-205ENST00000495627 SMARCA4P51532 1647 aa35.65■■■■□ 3.3
GMPPB-205ENST00000495627 MROH2BQ7Z745 1585 aa35.43■■■■□ 3.26
GMPPB-205ENST00000495627 SMARCA2P51531 1590 aa35.4■■■■□ 3.26
GMPPB-205ENST00000495627 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
GMPPB-205ENST00000495627 NCAPD3P42695 1498 aa35.33■■■■□ 3.25
GMPPB-205ENST00000495627 DNAJC5Q9H3Z4 198 aa35.32■■■■□ 3.24
GMPPB-205ENST00000495627 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
GMPPB-205ENST00000495627 HMGXB3Q12766 1538 aa35.19■■■■□ 3.22
GMPPB-205ENST00000495627 BAZ1BQ9UIG0 1483 aaKnown RBP35.16■■■■□ 3.22
GMPPB-205ENST00000495627 RSF1Q96T23 1441 aaPredicted RBP35.14■■■■□ 3.22
GMPPB-205ENST00000495627 WIZO95785 1651 aa35.08■■■■□ 3.21
GMPPB-205ENST00000495627 TOP2AP11388 1531 aaKnown RBP34.75■■■■□ 3.15
GMPPB-205ENST00000495627 CUX2O14529 1486 aa34.55■■■■□ 3.12
GMPPB-205ENST00000495627 SUPT5HO00267 1087 aaKnown RBP34.53■■■■□ 3.12
GMPPB-205ENST00000495627 NESP48681 1621 aa34.39■■■■□ 3.1
GMPPB-205ENST00000495627 LAMC3Q9Y6N6 1575 aa34.39■■■■□ 3.1
GMPPB-205ENST00000495627 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
GMPPB-205ENST00000495627 CCDC88BA6NC98 1476 aa34.33■■■■□ 3.09
GMPPB-205ENST00000495627 ERCC6Q03468 1493 aa34.29■■■■□ 3.08
GMPPB-205ENST00000495627 PDS5BQ9NTI5 1447 aa34.2■■■■□ 3.06
GMPPB-205ENST00000495627 CFTRP13569 1480 aa34.16■■■■□ 3.06
GMPPB-205ENST00000495627 KIF21AQ7Z4S6 1674 aa34.01■■■■□ 3.04
GMPPB-205ENST00000495627 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.03
GMPPB-205ENST00000495627 PRDM2Q13029 1718 aa33.94■■■■□ 3.02
GMPPB-205ENST00000495627 CEP164Q9UPV0 1460 aa33.91■■■■□ 3.02
GMPPB-205ENST00000495627 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
GMPPB-205ENST00000495627 MRC2Q9UBG0 1479 aa33.8■■■■□ 3
GMPPB-205ENST00000495627 WDR62O43379 1518 aa33.64■■■□□ 2.98
GMPPB-205ENST00000495627 URB2Q14146 1524 aaKnown RBP33.56■■■□□ 2.96
GMPPB-205ENST00000495627 ABCC8Q09428 1581 aa33.49■■■□□ 2.95
GMPPB-205ENST00000495627 TOPBP1Q92547 1522 aa33.42■■■□□ 2.94
GMPPB-205ENST00000495627 DNMBPQ6XZF7 1577 aa33.42■■■□□ 2.94
GMPPB-205ENST00000495627 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
GMPPB-205ENST00000495627 CUX1P39880 1505 aa33.24■■■□□ 2.91
GMPPB-205ENST00000495627 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
GMPPB-205ENST00000495627 WRNQ14191 1432 aaPredicted RBP eCLIP33.17■■■□□ 2.9
GMPPB-205ENST00000495627 POLA1P09884 1462 aaPredicted RBP33.15■■■□□ 2.9
GMPPB-205ENST00000495627 FGD5Q6ZNL6 1462 aa33.12■■■□□ 2.89
GMPPB-205ENST00000495627 SOGA1O94964 1423 aa33.06■■■□□ 2.88
GMPPB-205ENST00000495627 TOP2BQ02880 1626 aa33.03■■■□□ 2.88
GMPPB-205ENST00000495627 SYNJ1O43426 1573 aa33.02■■■□□ 2.88
GMPPB-205ENST00000495627 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
GMPPB-205ENST00000495627 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
GMPPB-205ENST00000495627 TARBP1Q13395 1621 aaKnown RBP33■■■□□ 2.87
GMPPB-205ENST00000495627 ZNF608Q9ULD9 1512 aaPredicted RBP32.96■■■□□ 2.87
GMPPB-205ENST00000495627 EIF4G3O43432 1585 aaKnown RBP32.87■■■□□ 2.85
GMPPB-205ENST00000495627 AQRO60306 1485 aaKnown RBP eCLIP32.83■■■□□ 2.85
GMPPB-205ENST00000495627 TDRD9Q8NDG6 1382 aaKnown RBP32.83■■■□□ 2.85
GMPPB-205ENST00000495627 WDR97A6NE52 1622 aa32.81■■■□□ 2.84
GMPPB-205ENST00000495627 ABCA10Q8WWZ4 1543 aa32.8■■■□□ 2.84
GMPPB-205ENST00000495627 OSCARQ8IYS5 282 aa32.68■■■□□ 2.82
GMPPB-205ENST00000495627 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
GMPPB-205ENST00000495627 GRIN2BQ13224 1484 aa32.64■■■□□ 2.82
GMPPB-205ENST00000495627 ABCA5Q8WWZ7 1642 aa32.62■■■□□ 2.81
GMPPB-205ENST00000495627 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
GMPPB-205ENST00000495627 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
GMPPB-205ENST00000495627 MAGI1Q96QZ7 1491 aaPredicted RBP32.53■■■□□ 2.8
GMPPB-205ENST00000495627 RIMBP3CA6NJZ7 1639 aa32.51■■■□□ 2.79
GMPPB-205ENST00000495627 RIMBP3BA6NNM3 1639 aa32.51■■■□□ 2.79
GMPPB-205ENST00000495627 RIMBP3Q9UFD9 1639 aa32.51■■■□□ 2.79
GMPPB-205ENST00000495627 FBLN2P98095 1184 aa32.5■■■□□ 2.79
GMPPB-205ENST00000495627 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
GMPPB-205ENST00000495627 ERICH3Q5RHP9 1530 aa32.43■■■□□ 2.78
GMPPB-205ENST00000495627 CHMP7Q8WUX9 453 aaPredicted RBP32.43■■■□□ 2.78
GMPPB-205ENST00000495627 CHD1O14646 1710 aa32.4■■■□□ 2.78
GMPPB-205ENST00000495627 SYNJ2O15056 1496 aa32.4■■■□□ 2.78
GMPPB-205ENST00000495627 ADAMTS12P58397 1594 aa32.32■■■□□ 2.76
GMPPB-205ENST00000495627 FHAD1B1AJZ9 1412 aa32.31■■■□□ 2.76
GMPPB-205ENST00000495627 CHIC1Q5VXU3 224 aa32.3■■■□□ 2.76
GMPPB-205ENST00000495627 ARHGEF11O15085 1522 aa32.3■■■□□ 2.76
GMPPB-205ENST00000495627 IGF1RP08069 1367 aa32.26■■■□□ 2.75
GMPPB-205ENST00000495627 GRIN2AQ12879 1464 aa32.21■■■□□ 2.75
GMPPB-205ENST00000495627 CUL7Q14999 1698 aa32.2■■■□□ 2.74
GMPPB-205ENST00000495627 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
GMPPB-205ENST00000495627 CARMIL1Q5VZK9 1371 aa32.11■■■□□ 2.73
GMPPB-205ENST00000495627 CLASP1Q7Z460 1538 aa32.03■■■□□ 2.72
GMPPB-205ENST00000495627 NUP160Q12769 1436 aa32.02■■■□□ 2.72
GMPPB-205ENST00000495627 EEA1Q15075 1411 aa32.02■■■□□ 2.72
GMPPB-205ENST00000495627 CEP170Q5SW79 1584 aa32■■■□□ 2.71
GMPPB-205ENST00000495627 CYB5RLQ6IPT4 315 aa31.95■■■□□ 2.71
GMPPB-205ENST00000495627 CSRNP3Q8WYN3 585 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms